RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 IGLV5-52A0A0A0MRZ9 124 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 MOBPQ13875 183 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 COL7A1Q02388 2944 aa3.31□□□□□ -1.88
VPS41-203ENST00000395969 LINC00313P59037 77 aa3.3□□□□□ -1.88
VPS41-203ENST00000395969 ATRQ13535 2644 aa3.3□□□□□ -1.88
VPS41-203ENST00000395969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.3□□□□□ -1.88
VPS41-203ENST00000395969 SPINK7P58062 85 aa3.3□□□□□ -1.88
VPS41-203ENST00000395969 TENM3Q9P273 2699 aa3.3□□□□□ -1.88
VPS41-203ENST00000395969 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
VPS41-203ENST00000395969 A0A096LNI7 61 aa3.29□□□□□ -1.88
VPS41-203ENST00000395969 LINC00476Q8WZB0 136 aa3.29□□□□□ -1.88
VPS41-203ENST00000395969 PKD1P98161 4303 aa3.29□□□□□ -1.88
VPS41-203ENST00000395969 DNAH11Q96DT5 4516 aa3.29□□□□□ -1.88
VPS41-203ENST00000395969 COL6A5A8TX70 2615 aa3.29□□□□□ -1.88
VPS41-203ENST00000395969 FLNBO75369 2602 aaKnown RBP3.29□□□□□ -1.88
VPS41-203ENST00000395969 H0Y9P7 68 aa3.28□□□□□ -1.88
VPS41-203ENST00000395969 IGLV7-46A0A075B6I9 117 aa3.28□□□□□ -1.88
VPS41-203ENST00000395969 COA5Q86WW8 74 aa3.28□□□□□ -1.88
VPS41-203ENST00000395969 CHTF8P0CG12 524 aa3.28□□□□□ -1.88
VPS41-203ENST00000395969 LINC01558Q9Y6Z2 57 aa3.28□□□□□ -1.88
VPS41-203ENST00000395969 ASB16-AS1Q495Z4 193 aa3.27□□□□□ -1.89
VPS41-203ENST00000395969 UBE2DNLQ8IWF7 75 aa3.27□□□□□ -1.89
VPS41-203ENST00000395969 IGHV6-1A0A0B4J1U7 121 aa3.27□□□□□ -1.89
VPS41-203ENST00000395969 KRTAP23-1A1A580 65 aa3.26□□□□□ -1.89
VPS41-203ENST00000395969 LINC01554Q52M75 96 aa3.26□□□□□ -1.89
VPS41-203ENST00000395969 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
VPS41-203ENST00000395969 CASC2Q6XLA1 102 aa3.25□□□□□ -1.89
VPS41-203ENST00000395969 SACSQ9NZJ4 4579 aa3.25□□□□□ -1.89
VPS41-203ENST00000395969 DMBT1Q9UGM3 2413 aaPredicted RBP3.25□□□□□ -1.89
VPS41-203ENST00000395969 FAM168BA1KXE4 195 aa3.25□□□□□ -1.89
VPS41-203ENST00000395969 C1orf134Q5TEV5 83 aa3.25□□□□□ -1.89
VPS41-203ENST00000395969 NBEAL1Q6ZS30 2694 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 PKHD1P08F94 4074 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 DNHD1Q96M86 4753 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 A0A087WSZ3 146 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 A0A1B0GVY2 172 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 RTL8CO15255 209 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 RETNLBQ9BQ08 111 aa3.24□□□□□ -1.89
VPS41-203ENST00000395969 FBN3Q75N90 2809 aa3.23□□□□□ -1.89
VPS41-203ENST00000395969 A8MWP4 228 aa3.23□□□□□ -1.89
VPS41-203ENST00000395969 KRTAP11-1Q8IUC1 163 aa3.23□□□□□ -1.89
VPS41-203ENST00000395969 MEGF8Q7Z7M0 2845 aa3.23□□□□□ -1.89
VPS41-203ENST00000395969 RPS29P62273 56 aaKnown RBP3.22□□□□□ -1.89
VPS41-203ENST00000395969 LINC00472Q9H8W2 130 aa3.22□□□□□ -1.89
VPS41-203ENST00000395969 STAB1Q9NY15 2570 aa3.22□□□□□ -1.89
VPS41-203ENST00000395969 DNAH5Q8TE73 4624 aa3.22□□□□□ -1.89
VPS41-203ENST00000395969 MMP24-AS1A0A0U1RRL7 71 aa3.21□□□□□ -1.9
VPS41-203ENST00000395969 CSAG1Q6PB30 78 aa3.21□□□□□ -1.9
VPS41-203ENST00000395969 ZNF861PO60384 105 aa3.2□□□□□ -1.9
VPS41-203ENST00000395969 PANO1I0J062 215 aa3.2□□□□□ -1.9
VPS41-203ENST00000395969 TENM2Q9NT68 2774 aa3.2□□□□□ -1.9
VPS41-203ENST00000395969 HRES1P13985 223 aa3.2□□□□□ -1.9
VPS41-203ENST00000395969 KMT2AQ03164 3969 aa3.19□□□□□ -1.9
VPS41-203ENST00000395969 A0A087X002 238 aa3.19□□□□□ -1.9
VPS41-203ENST00000395969 TP53AIP1Q9HCN2 124 aa3.19□□□□□ -1.9
VPS41-203ENST00000395969 IGLV7-43P04211 117 aa3.18□□□□□ -1.9
VPS41-203ENST00000395969 IGKV2-24A0A0C4DH68 120 aa3.18□□□□□ -1.9
VPS41-203ENST00000395969 SSBP3-AS1Q7Z2R9 100 aa3.18□□□□□ -1.9
VPS41-203ENST00000395969 DYNC1H1Q14204 4646 aaKnown RBP3.17□□□□□ -1.9
VPS41-203ENST00000395969 KRTAP10-4P60372 401 aaPredicted RBP3.17□□□□□ -1.9
VPS41-203ENST00000395969 PRLHP81277 87 aa3.17□□□□□ -1.9
VPS41-203ENST00000395969 Q96NJ1 140 aa3.17□□□□□ -1.9
VPS41-203ENST00000395969 PSORS1C2Q9UIG4 136 aa3.16□□□□□ -1.9
VPS41-203ENST00000395969 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
VPS41-203ENST00000395969 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
VPS41-203ENST00000395969 KRTAP16-1A8MUX0 517 aa3.15□□□□□ -1.91
VPS41-203ENST00000395969 KRTAP10-2P60368 255 aa3.14□□□□□ -1.91
VPS41-203ENST00000395969 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
VPS41-203ENST00000395969 SPINK6Q6UWN8 80 aa3.13□□□□□ -1.91
VPS41-203ENST00000395969 C8orf17Q9NRJ1 99 aa3.13□□□□□ -1.91
VPS41-203ENST00000395969 KRTAP10-1P60331 282 aa3.13□□□□□ -1.91
VPS41-203ENST00000395969 CIRBP-AS1Q8TBR5 109 aa3.13□□□□□ -1.91
VPS41-203ENST00000395969 XP32Q5T750 250 aa3.12□□□□□ -1.91
VPS41-203ENST00000395969 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
VPS41-203ENST00000395969 APOBP04114 4563 aaKnown RBP3.12□□□□□ -1.91
VPS41-203ENST00000395969 RYR2Q92736 4967 aa3.12□□□□□ -1.91
VPS41-203ENST00000395969 HYDINQ4G0P3 5121 aa3.11□□□□□ -1.91
VPS41-203ENST00000395969 A0A1B0GU69 56 aa3.11□□□□□ -1.91
VPS41-203ENST00000395969 LY6G6CO95867 125 aa3.11□□□□□ -1.91
VPS41-203ENST00000395969 KRTAP13-3Q3SY46 172 aa3.11□□□□□ -1.91
VPS41-203ENST00000395969 STAB2Q8WWQ8 2551 aa3.11□□□□□ -1.91
VPS41-203ENST00000395969 MRPL34Q9BQ48 92 aaKnown RBP3.1□□□□□ -1.91
VPS41-203ENST00000395969 A0A1B0GVX0 72 aa3.1□□□□□ -1.91
VPS41-203ENST00000395969 LUZP6Q538Z0 58 aa3.1□□□□□ -1.91
VPS41-203ENST00000395969 ACYP2P14621 99 aa3.09□□□□□ -1.91
VPS41-203ENST00000395969 MIR22HGQ0VDD5 57 aa3.09□□□□□ -1.92
VPS41-203ENST00000395969 KRTAP4-8Q9BYQ9 185 aa3.09□□□□□ -1.92
VPS41-203ENST00000395969 SPINK1P00995 79 aa3.08□□□□□ -1.92
VPS41-203ENST00000395969 DMAC1Q96GE9 116 aa3.08□□□□□ -1.92
VPS41-203ENST00000395969 MGAM2Q2M2H8 2515 aa3.07□□□□□ -1.92
VPS41-203ENST00000395969 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
VPS41-203ENST00000395969 TNXBP22105 4242 aa3.07□□□□□ -1.92
VPS41-203ENST00000395969 Q5W150 140 aa3.07□□□□□ -1.92
VPS41-203ENST00000395969 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
VPS41-203ENST00000395969 LRP1BQ9NZR2 4599 aa3.05□□□□□ -1.92
VPS41-203ENST00000395969 HSPG2P98160 4391 aa3.05□□□□□ -1.92
VPS41-203ENST00000395969 UQCR11O14957 56 aa3.05□□□□□ -1.92
VPS41-203ENST00000395969 FAT3Q8TDW7 4589 aa3.05□□□□□ -1.92
VPS41-203ENST00000395969 ROMO1P60602 79 aa3.04□□□□□ -1.92
VPS41-203ENST00000395969 TGP01266 2768 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms