RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 IGLV7-46A0A075B6I9 117 aa2.03□□□□□ -2.08
VPS13C-203ENST00000395896 PCOTHQ58A44 107 aa2.03□□□□□ -2.08
VPS13C-203ENST00000395896 A0A1B0GU69 56 aa2.03□□□□□ -2.08
VPS13C-203ENST00000395896 PRR4Q16378 134 aa2.02□□□□□ -2.09
VPS13C-203ENST00000395896 J3QL48 77 aa2.02□□□□□ -2.09
VPS13C-203ENST00000395896 MMP24-AS1A0A0U1RRL7 71 aa2.02□□□□□ -2.09
VPS13C-203ENST00000395896 UQCR11O14957 56 aa2.02□□□□□ -2.09
VPS13C-203ENST00000395896 PRKDCP78527 4128 aaKnown RBP2.02□□□□□ -2.09
VPS13C-203ENST00000395896 RBM12B-AS1Q9P1G2 102 aa2.01□□□□□ -2.09
VPS13C-203ENST00000395896 KRTAP10-1P60331 282 aa2.01□□□□□ -2.09
VPS13C-203ENST00000395896 KRTAP10-2P60368 255 aa2.01□□□□□ -2.09
VPS13C-203ENST00000395896 SMR3BP02814 79 aaPredicted RBP2□□□□□ -2.09
VPS13C-203ENST00000395896 ANAPC11Q9NYG5 84 aa2□□□□□ -2.09
VPS13C-203ENST00000395896 Q1T7F1 81 aa2□□□□□ -2.09
VPS13C-203ENST00000395896 KRTAP29-1A8MX34 341 aaPredicted RBP2□□□□□ -2.09
VPS13C-203ENST00000395896 KRTAP7-1Q8IUC3 87 aa2□□□□□ -2.09
VPS13C-203ENST00000395896 COA5Q86WW8 74 aa2□□□□□ -2.09
VPS13C-203ENST00000395896 Q8N9P0 234 aaPredicted RBP2□□□□□ -2.09
VPS13C-203ENST00000395896 PMAIP1Q13794 54 aa1.99□□□□□ -2.09
VPS13C-203ENST00000395896 C4orf26Q17RF5 130 aa1.99□□□□□ -2.09
VPS13C-203ENST00000395896 CYSTM1Q9H1C7 97 aa1.99□□□□□ -2.09
VPS13C-203ENST00000395896 PANO1I0J062 215 aa1.99□□□□□ -2.09
VPS13C-203ENST00000395896 PRR26Q8N8Z3 221 aa1.99□□□□□ -2.09
VPS13C-203ENST00000395896 SEC61BP60468 96 aaKnown RBP1.99□□□□□ -2.09
VPS13C-203ENST00000395896 DNAH9Q9NYC9 4486 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 ZCCHC13Q8WW36 166 aaKnown RBP1.98□□□□□ -2.09
VPS13C-203ENST00000395896 A0A087X002 238 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 OXTP01178 125 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 PSPHP1O15172 72 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 DNAH7Q8WXX0 4024 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 DNAH10Q8IVF4 4471 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 Q5VSD8 79 aa1.98□□□□□ -2.09
VPS13C-203ENST00000395896 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
VPS13C-203ENST00000395896 KMT2AQ03164 3969 aa1.96□□□□□ -2.1
VPS13C-203ENST00000395896 HUWE1Q7Z6Z7 4374 aaKnown RBP1.96□□□□□ -2.1
VPS13C-203ENST00000395896 DMAC1Q96GE9 116 aa1.96□□□□□ -2.1
VPS13C-203ENST00000395896 DNAH3Q8TD57 4116 aa1.95□□□□□ -2.1
VPS13C-203ENST00000395896 KRTAP11-1Q8IUC1 163 aa1.95□□□□□ -2.1
VPS13C-203ENST00000395896 Q75L30 129 aa1.95□□□□□ -2.1
VPS13C-203ENST00000395896 SPINK7P58062 85 aa1.95□□□□□ -2.1
VPS13C-203ENST00000395896 HRES1P13985 223 aa1.95□□□□□ -2.1
VPS13C-203ENST00000395896 Q5W150 140 aa1.95□□□□□ -2.1
VPS13C-203ENST00000395896 Q8N1X5 172 aa1.94□□□□□ -2.1
VPS13C-203ENST00000395896 CSAG1Q6PB30 78 aa1.94□□□□□ -2.1
VPS13C-203ENST00000395896 C9orf92A6NGG3 77 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 A8MUU9 505 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 KRTAP1-4P0C5Y4 121 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 RETNLBQ9BQ08 111 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 CDC42SE1Q9NRR8 79 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 KRTAP13-2Q52LG2 175 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 HECTD4Q9Y4D8 3996 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 COX6B2Q6YFQ2 88 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 LINC01558Q9Y6Z2 57 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
VPS13C-203ENST00000395896 C20orf166-AS1Q96NR2 134 aa1.92□□□□□ -2.1
VPS13C-203ENST00000395896 DNAH1Q9P2D7 4330 aa1.92□□□□□ -2.1
VPS13C-203ENST00000395896 NOTCH2NLQ7Z3S9 236 aa1.91□□□□□ -2.1
VPS13C-203ENST00000395896 VPS13BQ7Z7G8 4022 aa1.91□□□□□ -2.1
VPS13C-203ENST00000395896 TPRXLQ17RH7 258 aa1.9□□□□□ -2.1
VPS13C-203ENST00000395896 A0A1B0GU33 70 aa1.9□□□□□ -2.11
VPS13C-203ENST00000395896 RPL37P61927 97 aaKnown RBP1.89□□□□□ -2.11
VPS13C-203ENST00000395896 PLECQ15149 4684 aaKnown RBP1.88□□□□□ -2.11
VPS13C-203ENST00000395896 A0A1B0GVY2 172 aa1.88□□□□□ -2.11
VPS13C-203ENST00000395896 PKHD1P08F94 4074 aa1.88□□□□□ -2.11
VPS13C-203ENST00000395896 DNAH6Q9C0G6 4158 aa1.87□□□□□ -2.11
VPS13C-203ENST00000395896 KTN1-AS1Q86SY8 53 aa1.87□□□□□ -2.11
VPS13C-203ENST00000395896 STARD9Q9P2P6 4700 aa1.87□□□□□ -2.11
VPS13C-203ENST00000395896 DNHD1Q96M86 4753 aa1.87□□□□□ -2.11
VPS13C-203ENST00000395896 M0QZ58 72 aa1.87□□□□□ -2.11
VPS13C-203ENST00000395896 S4R3F8 94 aa1.87□□□□□ -2.11
VPS13C-203ENST00000395896 H1FX-AS1Q4G0G2 97 aa1.86□□□□□ -2.11
VPS13C-203ENST00000395896 R4GN34 69 aa1.86□□□□□ -2.11
VPS13C-203ENST00000395896 CRIPTQ9P021 101 aa1.86□□□□□ -2.11
VPS13C-203ENST00000395896 KRTAP10-8P60410 259 aa1.86□□□□□ -2.11
VPS13C-203ENST00000395896 Q5VV11 94 aa1.86□□□□□ -2.11
VPS13C-203ENST00000395896 DNAH17Q9UFH2 4485 aa1.84□□□□□ -2.11
VPS13C-203ENST00000395896 VPS13DQ5THJ4 4388 aa1.84□□□□□ -2.12
VPS13C-203ENST00000395896 DNAH8Q96JB1 4490 aa1.84□□□□□ -2.12
VPS13C-203ENST00000395896 KRTAP16-1A8MUX0 517 aa1.83□□□□□ -2.12
VPS13C-203ENST00000395896 SPATA8Q6RVD6 105 aa1.83□□□□□ -2.12
VPS13C-203ENST00000395896 XP32Q5T750 250 aa1.83□□□□□ -2.12
VPS13C-203ENST00000395896 DNAH11Q96DT5 4516 aa1.83□□□□□ -2.12
VPS13C-203ENST00000395896 KRTAP13-3Q3SY46 172 aa1.83□□□□□ -2.12
VPS13C-203ENST00000395896 DYNC2H1Q8NCM8 4307 aaKnown RBP1.82□□□□□ -2.12
VPS13C-203ENST00000395896 ALMS1Q8TCU4 4167 aa1.82□□□□□ -2.12
VPS13C-203ENST00000395896 RYR1P21817 5038 aa1.82□□□□□ -2.12
VPS13C-203ENST00000395896 M0R2T5 61 aa1.82□□□□□ -2.12
VPS13C-203ENST00000395896 DNAH2Q9P225 4427 aa1.81□□□□□ -2.12
VPS13C-203ENST00000395896 DNAH5Q8TE73 4624 aa1.81□□□□□ -2.12
VPS13C-203ENST00000395896 LCA10Q71F78 164 aa1.81□□□□□ -2.12
VPS13C-203ENST00000395896 CAMK2N1Q7Z7J9 78 aa1.81□□□□□ -2.12
VPS13C-203ENST00000395896 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
VPS13C-203ENST00000395896 H0YAA0 97 aa1.78□□□□□ -2.13
VPS13C-203ENST00000395896 LINC01554Q52M75 96 aa1.77□□□□□ -2.13
VPS13C-203ENST00000395896 ROMO1P60602 79 aa1.76□□□□□ -2.13
VPS13C-203ENST00000395896 A0A0D9SG42 100 aa1.76□□□□□ -2.13
VPS13C-203ENST00000395896 FAT2Q9NYQ8 4349 aa1.76□□□□□ -2.13
VPS13C-203ENST00000395896 KRTAP10-4P60372 401 aaPredicted RBP1.76□□□□□ -2.13
VPS13C-203ENST00000395896 LRP1BQ9NZR2 4599 aa1.75□□□□□ -2.13
VPS13C-203ENST00000395896 ADM2Q7Z4H4 148 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms