RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 UBE2V1Q13404 147 aa7.86□□□□□ -1.15
SNCA-205ENST00000394991 NAA38Q9BRA0 125 aaKnown RBP7.86□□□□□ -1.15
SNCA-205ENST00000394991 FAM236DA0A1B0GTK5 79 aa7.85□□□□□ -1.15
SNCA-205ENST00000394991 TSTD3H0UI37 97 aa7.85□□□□□ -1.15
SNCA-205ENST00000394991 FAM236CP0DP71 79 aa7.85□□□□□ -1.15
SNCA-205ENST00000394991 KRTAP16-1A8MUX0 517 aa7.84□□□□□ -1.15
SNCA-205ENST00000394991 LOC105371267A0A1B0GV96 52 aa7.83□□□□□ -1.16
SNCA-205ENST00000394991 BAALC-AS2P0C853 105 aa7.83□□□□□ -1.16
SNCA-205ENST00000394991 TRBV7-4A0A0J9YYF1 115 aa7.82□□□□□ -1.16
SNCA-205ENST00000394991 CCKP06307 115 aa7.82□□□□□ -1.16
SNCA-205ENST00000394991 BATFQ16520 125 aa7.82□□□□□ -1.16
SNCA-205ENST00000394991 MPLKIPQ8TAP9 179 aa7.82□□□□□ -1.16
SNCA-205ENST00000394991 LINC00846Q9NV44 126 aa7.82□□□□□ -1.16
SNCA-205ENST00000394991 RBM3P98179 157 aaKnown RBP7.81□□□□□ -1.16
SNCA-205ENST00000394991 ATXN8Q156A1 80 aa7.81□□□□□ -1.16
SNCA-205ENST00000394991 KRTAP6-3Q3LI67 103 aa7.81□□□□□ -1.16
SNCA-205ENST00000394991 VPS25Q9BRG1 176 aa7.81□□□□□ -1.16
SNCA-205ENST00000394991 HRES1P13985 223 aa7.8□□□□□ -1.16
SNCA-205ENST00000394991 SIGMAR1Q99720 223 aa7.8□□□□□ -1.16
SNCA-205ENST00000394991 DSCR8Q96T75 97 aa7.79□□□□□ -1.16
SNCA-205ENST00000394991 IGKV4-1P06312 121 aa7.77□□□□□ -1.17
SNCA-205ENST00000394991 DSCR10P59022 87 aa7.77□□□□□ -1.17
SNCA-205ENST00000394991 DEFB116Q30KQ4 102 aa7.76□□□□□ -1.17
SNCA-205ENST00000394991 C9JAW5 83 aa7.75□□□□□ -1.17
SNCA-205ENST00000394991 RBM12B-AS1Q9P1G2 102 aa7.75□□□□□ -1.17
SNCA-205ENST00000394991 LYRM7Q5U5X0 104 aa7.74□□□□□ -1.17
SNCA-205ENST00000394991 LINC00472Q9H8W2 130 aa7.72□□□□□ -1.17
SNCA-205ENST00000394991 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
SNCA-205ENST00000394991 LINC00313P59037 77 aa7.7□□□□□ -1.18
SNCA-205ENST00000394991 NOTCH2NLQ7Z3S9 236 aa7.7□□□□□ -1.18
SNCA-205ENST00000394991 IGHV6-1A0A0B4J1U7 121 aa7.68□□□□□ -1.18
SNCA-205ENST00000394991 C9orf118A6NHY6 69 aa7.68□□□□□ -1.18
SNCA-205ENST00000394991 TAX1BP3O14907 124 aa7.66□□□□□ -1.18
SNCA-205ENST00000394991 C21orf62-AS1Q17RA5 79 aa7.66□□□□□ -1.18
SNCA-205ENST00000394991 Q6ZQT0 140 aa7.66□□□□□ -1.18
SNCA-205ENST00000394991 LOC110117498A0A087WWA1 95 aa7.65□□□□□ -1.18
SNCA-205ENST00000394991 C14orf132Q9NPU4 83 aa7.65□□□□□ -1.18
SNCA-205ENST00000394991 NEBP20929 6669 aa7.64□□□□□ -1.19
SNCA-205ENST00000394991 A0A1W2PPM0 123 aa7.64□□□□□ -1.19
SNCA-205ENST00000394991 KRTAP4-12Q9BQ66 201 aa7.64□□□□□ -1.19
SNCA-205ENST00000394991 PDE6GP18545 87 aa7.63□□□□□ -1.19
SNCA-205ENST00000394991 A0A1B0GVX0 72 aa7.62□□□□□ -1.19
SNCA-205ENST00000394991 J3KT08 172 aa7.62□□□□□ -1.19
SNCA-205ENST00000394991 KRTAP9-9Q9BYP9 154 aa7.62□□□□□ -1.19
SNCA-205ENST00000394991 KRTAP9-4Q9BYQ2 154 aa7.62□□□□□ -1.19
SNCA-205ENST00000394991 MTURNQ8N3F0 131 aa7.61□□□□□ -1.19
SNCA-205ENST00000394991 C8orf87E5RJ46 101 aa7.59□□□□□ -1.19
SNCA-205ENST00000394991 A0A1B0GW54 56 aa7.58□□□□□ -1.2
SNCA-205ENST00000394991 H3BT86 120 aa7.58□□□□□ -1.2
SNCA-205ENST00000394991 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
SNCA-205ENST00000394991 NDUFB1O75438 58 aa7.57□□□□□ -1.2
SNCA-205ENST00000394991 LCE3BQ5TA77 95 aa7.57□□□□□ -1.2
SNCA-205ENST00000394991 SPCS1Q9Y6A9 102 aa7.56□□□□□ -1.2
SNCA-205ENST00000394991 A8MWP4 228 aa7.55□□□□□ -1.2
SNCA-205ENST00000394991 NREPQ16612 68 aa7.54□□□□□ -1.2
SNCA-205ENST00000394991 COL5A1-AS1Q5SY13 56 aa7.53□□□□□ -1.2
SNCA-205ENST00000394991 KRTAP4-8A0A0G2JLE6 195 aa7.52□□□□□ -1.21
SNCA-205ENST00000394991 IGKV3D-7A0A0C4DH55 119 aa7.5□□□□□ -1.21
SNCA-205ENST00000394991 C8orf17Q9NRJ1 99 aa7.5□□□□□ -1.21
SNCA-205ENST00000394991 SPINK7P58062 85 aa7.47□□□□□ -1.21
SNCA-205ENST00000394991 PCP4L1A6NKN8 68 aa7.46□□□□□ -1.22
SNCA-205ENST00000394991 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
SNCA-205ENST00000394991 PRR15Q8IV56 129 aa7.46□□□□□ -1.22
SNCA-205ENST00000394991 ZCCHC13Q8WW36 166 aaKnown RBP7.46□□□□□ -1.22
SNCA-205ENST00000394991 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
SNCA-205ENST00000394991 K7EP34 96 aa7.44□□□□□ -1.22
SNCA-205ENST00000394991 Q6ZVQ6 151 aa7.43□□□□□ -1.22
SNCA-205ENST00000394991 BPY2O14599 106 aa7.41□□□□□ -1.22
SNCA-205ENST00000394991 WFDC13Q8IUB5 93 aa7.41□□□□□ -1.22
SNCA-205ENST00000394991 K7EQZ3 153 aa7.4□□□□□ -1.22
SNCA-205ENST00000394991 PRO0461Q9UI25 63 aa7.4□□□□□ -1.22
SNCA-205ENST00000394991 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
SNCA-205ENST00000394991 TMEM254Q8TBM7 123 aa7.38□□□□□ -1.23
SNCA-205ENST00000394991 MRPL34Q9BQ48 92 aaKnown RBP7.38□□□□□ -1.23
SNCA-205ENST00000394991 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
SNCA-205ENST00000394991 NDUFS5O43920 106 aa7.36□□□□□ -1.23
SNCA-205ENST00000394991 GTF2H5Q6ZYL4 71 aa7.36□□□□□ -1.23
SNCA-205ENST00000394991 Q8N9L7 120 aa7.34□□□□□ -1.23
SNCA-205ENST00000394991 UBL5Q9BZL1 73 aa7.32□□□□□ -1.24
SNCA-205ENST00000394991 A6NN06 94 aa7.3□□□□□ -1.24
SNCA-205ENST00000394991 F8W1H4 67 aa7.29□□□□□ -1.24
SNCA-205ENST00000394991 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
SNCA-205ENST00000394991 ETDBQ3ZM63 59 aa7.27□□□□□ -1.25
SNCA-205ENST00000394991 KRTAP4-7Q9BYR0 210 aa7.27□□□□□ -1.25
SNCA-205ENST00000394991 H1FX-AS1Q4G0G2 97 aa7.26□□□□□ -1.25
SNCA-205ENST00000394991 MT1BP07438 61 aa7.25□□□□□ -1.25
SNCA-205ENST00000394991 KRTAP5-9P26371 169 aa7.25□□□□□ -1.25
SNCA-205ENST00000394991 HCG22E2RYF7 251 aa7.24□□□□□ -1.25
SNCA-205ENST00000394991 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.26
SNCA-205ENST00000394991 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
SNCA-205ENST00000394991 Q5W150 140 aa7.21□□□□□ -1.26
SNCA-205ENST00000394991 KMT2DO14686 5537 aa7.18□□□□□ -1.26
SNCA-205ENST00000394991 CXCL6P80162 114 aa7.17□□□□□ -1.26
SNCA-205ENST00000394991 KRTAP10-5P60370 271 aa7.16□□□□□ -1.26
SNCA-205ENST00000394991 C7orf65Q6ZTY9 151 aa7.16□□□□□ -1.26
SNCA-205ENST00000394991 MDN1Q9NU22 5596 aa7.14□□□□□ -1.27
SNCA-205ENST00000394991 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
SNCA-205ENST00000394991 LCE1DQ5T752 114 aa7.14□□□□□ -1.27
SNCA-205ENST00000394991 Q5VV11 94 aa7.14□□□□□ -1.27
SNCA-205ENST00000394991 KRTAP2-3P0C7H8 128 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms