RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 KRTAP21-3Q3LHN1 58 aa9.32□□□□□ -0.92
SMARCD1-202ENST00000394963 LIMD2Q9BT23 127 aa9.32□□□□□ -0.92
SMARCD1-202ENST00000394963 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
SMARCD1-202ENST00000394963 VPS13DQ5THJ4 4388 aa9.3□□□□□ -0.92
SMARCD1-202ENST00000394963 KRTAP13-2Q52LG2 175 aa9.3□□□□□ -0.92
SMARCD1-202ENST00000394963 FAM229AH3BQW9 127 aa9.29□□□□□ -0.92
SMARCD1-202ENST00000394963 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
SMARCD1-202ENST00000394963 SEC61GP60059 68 aa9.27□□□□□ -0.92
SMARCD1-202ENST00000394963 FAM229BQ4G0N7 80 aa9.27□□□□□ -0.93
SMARCD1-202ENST00000394963 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
SMARCD1-202ENST00000394963 PRO0628Q9UI54 55 aa9.26□□□□□ -0.93
SMARCD1-202ENST00000394963 HYDINQ4G0P3 5121 aa9.26□□□□□ -0.93
SMARCD1-202ENST00000394963 ATP5EP56381 51 aaPredicted RBP9.24□□□□□ -0.93
SMARCD1-202ENST00000394963 Q5XG85 94 aa9.24□□□□□ -0.93
SMARCD1-202ENST00000394963 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
SMARCD1-202ENST00000394963 KRTAP29-1A8MX34 341 aaPredicted RBP9.23□□□□□ -0.93
SMARCD1-202ENST00000394963 SPAG11AQ6PDA7 123 aa9.22□□□□□ -0.93
SMARCD1-202ENST00000394963 DNAH2Q9P225 4427 aa9.22□□□□□ -0.93
SMARCD1-202ENST00000394963 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
SMARCD1-202ENST00000394963 DNAH6Q9C0G6 4158 aa9.21□□□□□ -0.94
SMARCD1-202ENST00000394963 Q8N9P0 234 aaPredicted RBP9.2□□□□□ -0.94
SMARCD1-202ENST00000394963 FRAS1Q86XX4 4008 aa9.18□□□□□ -0.94
SMARCD1-202ENST00000394963 Q5W150 140 aa9.17□□□□□ -0.94
SMARCD1-202ENST00000394963 PRR15LQ9BU68 103 aa9.17□□□□□ -0.94
SMARCD1-202ENST00000394963 Q6ZSA8 131 aa9.16□□□□□ -0.94
SMARCD1-202ENST00000394963 FAT1Q14517 4588 aa9.14□□□□□ -0.95
SMARCD1-202ENST00000394963 CD164Q04900 197 aa9.13□□□□□ -0.95
SMARCD1-202ENST00000394963 COA5Q86WW8 74 aa9.12□□□□□ -0.95
SMARCD1-202ENST00000394963 A8MUN3 132 aa9.11□□□□□ -0.95
SMARCD1-202ENST00000394963 Q8N1X5 172 aa9.11□□□□□ -0.95
SMARCD1-202ENST00000394963 C8orf87E5RJ46 101 aa9.1□□□□□ -0.95
SMARCD1-202ENST00000394963 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
SMARCD1-202ENST00000394963 DNAH5Q8TE73 4624 aa9.1□□□□□ -0.95
SMARCD1-202ENST00000394963 FP248Q71RG6 208 aaPredicted RBP9.1□□□□□ -0.95
SMARCD1-202ENST00000394963 C7orf65Q6ZTY9 151 aa9.1□□□□□ -0.95
SMARCD1-202ENST00000394963 KMT2CQ8NEZ4 4911 aaKnown RBP9.1□□□□□ -0.95
SMARCD1-202ENST00000394963 Q5VSD8 79 aa9.09□□□□□ -0.95
SMARCD1-202ENST00000394963 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.95
SMARCD1-202ENST00000394963 PKHD1P08F94 4074 aa9.08□□□□□ -0.96
SMARCD1-202ENST00000394963 A6NED7 52 aa9.07□□□□□ -0.96
SMARCD1-202ENST00000394963 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
SMARCD1-202ENST00000394963 H3BPC8 53 aa9.07□□□□□ -0.96
SMARCD1-202ENST00000394963 DNAH8Q96JB1 4490 aa9.06□□□□□ -0.96
SMARCD1-202ENST00000394963 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
SMARCD1-202ENST00000394963 DNAH17Q9UFH2 4485 aa9.04□□□□□ -0.96
SMARCD1-202ENST00000394963 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
SMARCD1-202ENST00000394963 ZCCHC13Q8WW36 166 aaKnown RBP9.03□□□□□ -0.96
SMARCD1-202ENST00000394963 HRES1P13985 223 aa9.02□□□□□ -0.97
SMARCD1-202ENST00000394963 HECTD4Q9Y4D8 3996 aa9.02□□□□□ -0.97
SMARCD1-202ENST00000394963 CYP4F30PQ9H0H9 118 aa8.99□□□□□ -0.97
SMARCD1-202ENST00000394963 SACSQ9NZJ4 4579 aa8.97□□□□□ -0.97
SMARCD1-202ENST00000394963 ACYP2P14621 99 aa8.96□□□□□ -0.97
SMARCD1-202ENST00000394963 IGLV7-46A0A075B6I9 117 aa8.94□□□□□ -0.98
SMARCD1-202ENST00000394963 DYNC1H1Q14204 4646 aaKnown RBP8.93□□□□□ -0.98
SMARCD1-202ENST00000394963 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.99
SMARCD1-202ENST00000394963 ATP11AUNQ6ZP68 121 aa8.89□□□□□ -0.99
SMARCD1-202ENST00000394963 A8MU10 97 aa8.89□□□□□ -0.99
SMARCD1-202ENST00000394963 VPS13BQ7Z7G8 4022 aa8.88□□□□□ -0.99
SMARCD1-202ENST00000394963 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
SMARCD1-202ENST00000394963 KIAA1109Q2LD37 5005 aa8.87□□□□□ -0.99
SMARCD1-202ENST00000394963 A0A1B0GU69 56 aa8.83□□□□□ -1
SMARCD1-202ENST00000394963 J3QL48 77 aa8.82□□□□□ -1
SMARCD1-202ENST00000394963 SPINK7P58062 85 aa8.8□□□□□ -1
SMARCD1-202ENST00000394963 ASB16-AS1Q495Z4 193 aa8.78□□□□□ -1
SMARCD1-202ENST00000394963 RYR3Q15413 4870 aa8.76□□□□□ -1.01
SMARCD1-202ENST00000394963 MYCBP2O75592 4640 aa8.76□□□□□ -1.01
SMARCD1-202ENST00000394963 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
SMARCD1-202ENST00000394963 ALMS1Q8TCU4 4167 aa8.74□□□□□ -1.01
SMARCD1-202ENST00000394963 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
SMARCD1-202ENST00000394963 APOBP04114 4563 aaKnown RBP8.73□□□□□ -1.01
SMARCD1-202ENST00000394963 RYR2Q92736 4967 aa8.73□□□□□ -1.01
SMARCD1-202ENST00000394963 Q1T7F1 81 aa8.71□□□□□ -1.01
SMARCD1-202ENST00000394963 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
SMARCD1-202ENST00000394963 Q5VV11 94 aa8.69□□□□□ -1.02
SMARCD1-202ENST00000394963 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
SMARCD1-202ENST00000394963 RYR1P21817 5038 aa8.65□□□□□ -1.02
SMARCD1-202ENST00000394963 PKD1P98161 4303 aa8.63□□□□□ -1.03
SMARCD1-202ENST00000394963 DMAC1Q96GE9 116 aa8.62□□□□□ -1.03
SMARCD1-202ENST00000394963 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
SMARCD1-202ENST00000394963 PRAC1Q96KF2 57 aa8.57□□□□□ -1.04
SMARCD1-202ENST00000394963 KRTAP13-3Q3SY46 172 aa8.56□□□□□ -1.04
SMARCD1-202ENST00000394963 KRTAP4-5Q9BYR2 181 aa8.56□□□□□ -1.04
SMARCD1-202ENST00000394963 KRTAP10-4P60372 401 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-202ENST00000394963 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
SMARCD1-202ENST00000394963 EPPK1P58107 5090 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-202ENST00000394963 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.04
SMARCD1-202ENST00000394963 H3BS24 57 aa8.52□□□□□ -1.05
SMARCD1-202ENST00000394963 KTN1-AS1Q86SY8 53 aa8.49□□□□□ -1.05
SMARCD1-202ENST00000394963 UQCR11O14957 56 aa8.49□□□□□ -1.05
SMARCD1-202ENST00000394963 A0A0D9SG42 100 aa8.48□□□□□ -1.05
SMARCD1-202ENST00000394963 A8MUU9 505 aa8.48□□□□□ -1.05
SMARCD1-202ENST00000394963 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
SMARCD1-202ENST00000394963 LCA10Q71F78 164 aa8.47□□□□□ -1.05
SMARCD1-202ENST00000394963 KRTAP17-1Q9BYP8 105 aa8.47□□□□□ -1.05
SMARCD1-202ENST00000394963 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
SMARCD1-202ENST00000394963 C20orf166-AS1Q96NR2 134 aa8.47□□□□□ -1.05
SMARCD1-202ENST00000394963 Q75L30 129 aa8.47□□□□□ -1.05
SMARCD1-202ENST00000394963 XP32Q5T750 250 aa8.44□□□□□ -1.06
SMARCD1-202ENST00000394963 COX6B2Q6YFQ2 88 aa8.4□□□□□ -1.06
SMARCD1-202ENST00000394963 CDC42SE1Q9NRR8 79 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 577.8 ms