RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SACSQ9NZJ4 4579 aa4.28□□□□□ -1.72
RTN4-205ENST00000394609 C1orf64Q8NEQ6 169 aa4.28□□□□□ -1.72
RTN4-205ENST00000394609 DNAH11Q96DT5 4516 aa4.27□□□□□ -1.73
RTN4-205ENST00000394609 UBE2AP49459 152 aa4.27□□□□□ -1.73
RTN4-205ENST00000394609 SPANXA2-OT1Q8N9U9 137 aa4.27□□□□□ -1.73
RTN4-205ENST00000394609 FRAS1Q86XX4 4008 aa4.27□□□□□ -1.73
RTN4-205ENST00000394609 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
RTN4-205ENST00000394609 Q8NBF4 154 aa4.26□□□□□ -1.73
RTN4-205ENST00000394609 CIRBP-AS1Q8TBR5 109 aa4.26□□□□□ -1.73
RTN4-205ENST00000394609 Q8N9L7 120 aa4.26□□□□□ -1.73
RTN4-205ENST00000394609 PSORS1C2Q9UIG4 136 aa4.26□□□□□ -1.73
RTN4-205ENST00000394609 CD164Q04900 197 aa4.25□□□□□ -1.73
RTN4-205ENST00000394609 PKD1P98161 4303 aa4.25□□□□□ -1.73
RTN4-205ENST00000394609 TRAV22A0A0B4J277 110 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 H0Y9J4 135 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 C1orf137Q5JT78 98 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 LIMD2Q9BT23 127 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 DNAH5Q8TE73 4624 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 A0A1W2PNM2 257 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 HCG22E2RYF7 251 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 Q6ZSA8 131 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 KRTAP13-1Q8IUC0 172 aa4.24□□□□□ -1.73
RTN4-205ENST00000394609 KMT2CQ8NEZ4 4911 aaKnown RBP4.24□□□□□ -1.73
RTN4-205ENST00000394609 DSCR10P59022 87 aa4.23□□□□□ -1.73
RTN4-205ENST00000394609 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
RTN4-205ENST00000394609 MP68P56378 58 aa4.22□□□□□ -1.73
RTN4-205ENST00000394609 A0A0G2JQZ4 141 aa4.21□□□□□ -1.74
RTN4-205ENST00000394609 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
RTN4-205ENST00000394609 IGLV8-61A0A075B6I0 122 aa4.2□□□□□ -1.74
RTN4-205ENST00000394609 A0A1B0GVY2 172 aa4.2□□□□□ -1.74
RTN4-205ENST00000394609 LRP1BQ9NZR2 4599 aa4.2□□□□□ -1.74
RTN4-205ENST00000394609 ZNF861PO60384 105 aa4.2□□□□□ -1.74
RTN4-205ENST00000394609 ANAPC11Q9NYG5 84 aa4.2□□□□□ -1.74
RTN4-205ENST00000394609 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
RTN4-205ENST00000394609 K7EQZ3 153 aa4.19□□□□□ -1.74
RTN4-205ENST00000394609 IGLV7-43P04211 117 aa4.19□□□□□ -1.74
RTN4-205ENST00000394609 Q5VV11 94 aa4.19□□□□□ -1.74
RTN4-205ENST00000394609 SPRR1BP22528 89 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 ATP11AUNQ6ZP68 121 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 RYR2Q92736 4967 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 KRTAP29-1A8MX34 341 aaPredicted RBP4.18□□□□□ -1.74
RTN4-205ENST00000394609 PSPHP1O15172 72 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 NDUFS5O43920 106 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 Q75L30 129 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 KTN1-AS1Q86SY8 53 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 LINC00208Q96KT6 92 aa4.18□□□□□ -1.74
RTN4-205ENST00000394609 IGFL1Q6UW32 110 aa4.17□□□□□ -1.74
RTN4-205ENST00000394609 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
RTN4-205ENST00000394609 IGLV9-49A0A0B4J1Y8 123 aa4.16□□□□□ -1.74
RTN4-205ENST00000394609 A8MUN3 132 aa4.16□□□□□ -1.74
RTN4-205ENST00000394609 SMR3BP02814 79 aaPredicted RBP4.15□□□□□ -1.74
RTN4-205ENST00000394609 ZNF706Q9Y5V0 76 aaPredicted RBP4.15□□□□□ -1.74
RTN4-205ENST00000394609 LINC00483Q53H64 154 aa4.15□□□□□ -1.75
RTN4-205ENST00000394609 DYNC1H1Q14204 4646 aaKnown RBP4.14□□□□□ -1.75
RTN4-205ENST00000394609 IGLV7-46A0A075B6I9 117 aa4.13□□□□□ -1.75
RTN4-205ENST00000394609 H0Y9P7 68 aa4.13□□□□□ -1.75
RTN4-205ENST00000394609 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
RTN4-205ENST00000394609 MOBPQ13875 183 aa4.13□□□□□ -1.75
RTN4-205ENST00000394609 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
RTN4-205ENST00000394609 RYR3Q15413 4870 aa4.12□□□□□ -1.75
RTN4-205ENST00000394609 A0A087WSZ3 146 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 A8MWP4 228 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 RPL37AP61513 92 aaKnown RBP4.11□□□□□ -1.75
RTN4-205ENST00000394609 CASC2Q6XLA1 102 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 VPS13BQ7Z7G8 4022 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 A6NN06 94 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
RTN4-205ENST00000394609 DEFB116Q30KQ4 102 aa4.1□□□□□ -1.75
RTN4-205ENST00000394609 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
RTN4-205ENST00000394609 A0A087X002 238 aa4.09□□□□□ -1.75
RTN4-205ENST00000394609 FAT1Q14517 4588 aa4.09□□□□□ -1.75
RTN4-205ENST00000394609 COA5Q86WW8 74 aa4.09□□□□□ -1.76
RTN4-205ENST00000394609 WFDC13Q8IUB5 93 aa4.09□□□□□ -1.76
RTN4-205ENST00000394609 LINC00472Q9H8W2 130 aa4.09□□□□□ -1.76
RTN4-205ENST00000394609 APOBP04114 4563 aaKnown RBP4.08□□□□□ -1.76
RTN4-205ENST00000394609 PRR4Q16378 134 aa4.08□□□□□ -1.76
RTN4-205ENST00000394609 LCA10Q71F78 164 aa4.08□□□□□ -1.76
RTN4-205ENST00000394609 A6NED7 52 aa4.07□□□□□ -1.76
RTN4-205ENST00000394609 KRTAP1-4P0C5Y4 121 aa4.07□□□□□ -1.76
RTN4-205ENST00000394609 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
RTN4-205ENST00000394609 C7orf65Q6ZTY9 151 aa4.07□□□□□ -1.76
RTN4-205ENST00000394609 RBM12B-AS1Q9P1G2 102 aa4.07□□□□□ -1.76
RTN4-205ENST00000394609 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
RTN4-205ENST00000394609 SPINK6Q6UWN8 80 aa4.06□□□□□ -1.76
RTN4-205ENST00000394609 KRTAP10-4P60372 401 aaPredicted RBP4.05□□□□□ -1.76
RTN4-205ENST00000394609 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
RTN4-205ENST00000394609 MMP24-AS1A0A0U1RRL7 71 aa4.04□□□□□ -1.76
RTN4-205ENST00000394609 A8MU10 97 aa4.03□□□□□ -1.76
RTN4-205ENST00000394609 PRR26Q8N8Z3 221 aa4.03□□□□□ -1.76
RTN4-205ENST00000394609 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
RTN4-205ENST00000394609 TYMSOSQ8TAI1 123 aa4.02□□□□□ -1.77
RTN4-205ENST00000394609 CDK2AP2O75956 126 aa4.01□□□□□ -1.77
RTN4-205ENST00000394609 Q96NJ1 140 aa4.01□□□□□ -1.77
RTN4-205ENST00000394609 Q5VSD8 79 aa4□□□□□ -1.77
RTN4-205ENST00000394609 HSPG2P98160 4391 aa4□□□□□ -1.77
RTN4-205ENST00000394609 EPPK1P58107 5090 aaKnown RBP3.98□□□□□ -1.77
RTN4-205ENST00000394609 KIAA1109Q2LD37 5005 aa3.98□□□□□ -1.77
RTN4-205ENST00000394609 C8orf17Q9NRJ1 99 aa3.98□□□□□ -1.77
RTN4-205ENST00000394609 HRES1P13985 223 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms