RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 DNAH5Q8TE73 4624 aa9.48□□□□□ -0.89
PTBP1-204ENST00000394601 DNAH11Q96DT5 4516 aa9.47□□□□□ -0.89
PTBP1-204ENST00000394601 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
PTBP1-204ENST00000394601 SPINK6Q6UWN8 80 aa9.45□□□□□ -0.9
PTBP1-204ENST00000394601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
PTBP1-204ENST00000394601 KRTAP29-1A8MX34 341 aaPredicted RBP9.44□□□□□ -0.9
PTBP1-204ENST00000394601 LINC00313P59037 77 aa9.44□□□□□ -0.9
PTBP1-204ENST00000394601 SPACA4Q8TDM5 124 aa9.43□□□□□ -0.9
PTBP1-204ENST00000394601 NUPR2A6NF83 97 aa9.42□□□□□ -0.9
PTBP1-204ENST00000394601 A8MWP4 228 aa9.42□□□□□ -0.9
PTBP1-204ENST00000394601 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
PTBP1-204ENST00000394601 LINC00472Q9H8W2 130 aa9.41□□□□□ -0.9
PTBP1-204ENST00000394601 C8orf87E5RJ46 101 aa9.4□□□□□ -0.9
PTBP1-204ENST00000394601 FLG2Q5D862 2391 aaPredicted RBP9.4□□□□□ -0.91
PTBP1-204ENST00000394601 PKD1P98161 4303 aa9.39□□□□□ -0.91
PTBP1-204ENST00000394601 IGLV7-46A0A075B6I9 117 aa9.38□□□□□ -0.91
PTBP1-204ENST00000394601 HRES1P13985 223 aa9.37□□□□□ -0.91
PTBP1-204ENST00000394601 H3BS24 57 aa9.37□□□□□ -0.91
PTBP1-204ENST00000394601 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
PTBP1-204ENST00000394601 A0A087WTM6 91 aa9.36□□□□□ -0.91
PTBP1-204ENST00000394601 ANAPC11Q9NYG5 84 aa9.36□□□□□ -0.91
PTBP1-204ENST00000394601 FAT2Q9NYQ8 4349 aa9.35□□□□□ -0.91
PTBP1-204ENST00000394601 MMP24-AS1A0A0U1RRL7 71 aa9.34□□□□□ -0.91
PTBP1-204ENST00000394601 Q6ZR54 194 aa9.34□□□□□ -0.91
PTBP1-204ENST00000394601 LINC00483Q53H64 154 aa9.34□□□□□ -0.91
PTBP1-204ENST00000394601 Q96NJ1 140 aa9.33□□□□□ -0.92
PTBP1-204ENST00000394601 TGP01266 2768 aa9.33□□□□□ -0.92
PTBP1-204ENST00000394601 HYDINQ4G0P3 5121 aa9.32□□□□□ -0.92
PTBP1-204ENST00000394601 H3BPC8 53 aa9.31□□□□□ -0.92
PTBP1-204ENST00000394601 LINC01558Q9Y6Z2 57 aa9.31□□□□□ -0.92
PTBP1-204ENST00000394601 A0A087X002 238 aa9.29□□□□□ -0.92
PTBP1-204ENST00000394601 NOTCH2NLQ7Z3S9 236 aa9.29□□□□□ -0.92
PTBP1-204ENST00000394601 RTL8CO15255 209 aa9.27□□□□□ -0.93
PTBP1-204ENST00000394601 IGLV5-52A0A0A0MRZ9 124 aa9.26□□□□□ -0.93
PTBP1-204ENST00000394601 PLAC8Q9NZF1 115 aa9.26□□□□□ -0.93
PTBP1-204ENST00000394601 PSORS1C2Q9UIG4 136 aa9.26□□□□□ -0.93
PTBP1-204ENST00000394601 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
PTBP1-204ENST00000394601 ASB16-AS1Q495Z4 193 aa9.26□□□□□ -0.93
PTBP1-204ENST00000394601 LRP1BQ9NZR2 4599 aa9.25□□□□□ -0.93
PTBP1-204ENST00000394601 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
PTBP1-204ENST00000394601 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
PTBP1-204ENST00000394601 LINC01554Q52M75 96 aa9.21□□□□□ -0.94
PTBP1-204ENST00000394601 A0A1B0GU69 56 aa9.2□□□□□ -0.94
PTBP1-204ENST00000394601 VPS13BQ7Z7G8 4022 aa9.2□□□□□ -0.94
PTBP1-204ENST00000394601 SPINK1P00995 79 aa9.18□□□□□ -0.94
PTBP1-204ENST00000394601 ZNF861PO60384 105 aa9.18□□□□□ -0.94
PTBP1-204ENST00000394601 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
PTBP1-204ENST00000394601 Q5W150 140 aa9.16□□□□□ -0.94
PTBP1-204ENST00000394601 MRPL34Q9BQ48 92 aaKnown RBP9.16□□□□□ -0.94
PTBP1-204ENST00000394601 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
PTBP1-204ENST00000394601 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
PTBP1-204ENST00000394601 A0A1B0GVX0 72 aa9.12□□□□□ -0.95
PTBP1-204ENST00000394601 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
PTBP1-204ENST00000394601 CIRBP-AS1Q8TBR5 109 aa9.1□□□□□ -0.95
PTBP1-204ENST00000394601 ACYP2P14621 99 aa9.09□□□□□ -0.95
PTBP1-204ENST00000394601 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
PTBP1-204ENST00000394601 IGLV7-43P04211 117 aa9.08□□□□□ -0.96
PTBP1-204ENST00000394601 KRTAP10-2P60368 255 aa9.08□□□□□ -0.96
PTBP1-204ENST00000394601 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
PTBP1-204ENST00000394601 IGKV2D-30A0A075B6S6 120 aa9.04□□□□□ -0.96
PTBP1-204ENST00000394601 IGKV2-30P06310 120 aa9.04□□□□□ -0.96
PTBP1-204ENST00000394601 CRIPTQ9P021 101 aa9.04□□□□□ -0.96
PTBP1-204ENST00000394601 SACSQ9NZJ4 4579 aa9.02□□□□□ -0.97
PTBP1-204ENST00000394601 LY6G6CO95867 125 aa9.01□□□□□ -0.97
PTBP1-204ENST00000394601 Q6ZSA8 131 aa9□□□□□ -0.97
PTBP1-204ENST00000394601 UQCR11O14957 56 aa8.99□□□□□ -0.97
PTBP1-204ENST00000394601 KRTAP13-3Q3SY46 172 aa8.99□□□□□ -0.97
PTBP1-204ENST00000394601 PLA2G1BP04054 148 aaKnown RBP8.97□□□□□ -0.97
PTBP1-204ENST00000394601 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
PTBP1-204ENST00000394601 KRTAP10-1P60331 282 aa8.94□□□□□ -0.98
PTBP1-204ENST00000394601 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
PTBP1-204ENST00000394601 KRTAP1-4P0C5Y4 121 aa8.88□□□□□ -0.99
PTBP1-204ENST00000394601 Q8N1X5 172 aa8.88□□□□□ -0.99
PTBP1-204ENST00000394601 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
PTBP1-204ENST00000394601 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
PTBP1-204ENST00000394601 DYNC1H1Q14204 4646 aaKnown RBP8.85□□□□□ -0.99
PTBP1-204ENST00000394601 APOBP04114 4563 aaKnown RBP8.83□□□□□ -1
PTBP1-204ENST00000394601 DMAC1Q96GE9 116 aa8.81□□□□□ -1
PTBP1-204ENST00000394601 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
PTBP1-204ENST00000394601 FAT1Q14517 4588 aa8.75□□□□□ -1.01
PTBP1-204ENST00000394601 FAM229AH3BQW9 127 aa8.74□□□□□ -1.01
PTBP1-204ENST00000394601 RYR2Q92736 4967 aa8.69□□□□□ -1.02
PTBP1-204ENST00000394601 KMT2CQ8NEZ4 4911 aaKnown RBP8.64□□□□□ -1.03
PTBP1-204ENST00000394601 ROMO1P60602 79 aa8.61□□□□□ -1.03
PTBP1-204ENST00000394601 KRTAP10-4P60372 401 aaPredicted RBP8.59□□□□□ -1.03
PTBP1-204ENST00000394601 TYMSOSQ8TAI1 123 aa8.59□□□□□ -1.03
PTBP1-204ENST00000394601 KRTAP25-1Q3LHN0 102 aa8.57□□□□□ -1.04
PTBP1-204ENST00000394601 A0A1B0GVY2 172 aa8.57□□□□□ -1.04
PTBP1-204ENST00000394601 LINC00304Q8N9R0 145 aa8.57□□□□□ -1.04
PTBP1-204ENST00000394601 TNXBP22105 4242 aa8.56□□□□□ -1.04
PTBP1-204ENST00000394601 H0YAA0 97 aa8.55□□□□□ -1.04
PTBP1-204ENST00000394601 J3QL48 77 aa8.55□□□□□ -1.04
PTBP1-204ENST00000394601 A8MUU9 505 aa8.54□□□□□ -1.04
PTBP1-204ENST00000394601 SPINT4Q6UDR6 99 aa8.53□□□□□ -1.04
PTBP1-204ENST00000394601 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
PTBP1-204ENST00000394601 A0A1B0GU33 70 aa8.51□□□□□ -1.05
PTBP1-204ENST00000394601 A0A0D9SG42 100 aa8.49□□□□□ -1.05
PTBP1-204ENST00000394601 C9orf92A6NGG3 77 aa8.48□□□□□ -1.05
PTBP1-204ENST00000394601 SMR3BP02814 79 aaPredicted RBP8.48□□□□□ -1.05
PTBP1-204ENST00000394601 FAT3Q8TDW7 4589 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms