RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 K7ERS5 55 aa5.06□□□□□ -1.6
DHFR2-202ENST00000394221 SPINK6Q6UWN8 80 aa5.04□□□□□ -1.6
DHFR2-202ENST00000394221 FBN1P35555 2871 aaKnown RBP5.04□□□□□ -1.6
DHFR2-202ENST00000394221 H3BNG1 76 aa5.03□□□□□ -1.6
DHFR2-202ENST00000394221 SPINK1P00995 79 aa5.03□□□□□ -1.6
DHFR2-202ENST00000394221 C20orf166-AS1Q96NR2 134 aa5.02□□□□□ -1.61
DHFR2-202ENST00000394221 CASC10Q5T4H9 136 aa5.02□□□□□ -1.61
DHFR2-202ENST00000394221 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
DHFR2-202ENST00000394221 NUPR2A6NF83 97 aa5.01□□□□□ -1.61
DHFR2-202ENST00000394221 FAM229AH3BQW9 127 aa5.01□□□□□ -1.61
DHFR2-202ENST00000394221 LY6G6CO95867 125 aa5□□□□□ -1.61
DHFR2-202ENST00000394221 UBE2DNLQ8IWF7 75 aa5□□□□□ -1.61
DHFR2-202ENST00000394221 TENM1Q9UKZ4 2725 aa4.99□□□□□ -1.61
DHFR2-202ENST00000394221 KRTAP13-3Q3SY46 172 aa4.99□□□□□ -1.61
DHFR2-202ENST00000394221 STAB2Q8WWQ8 2551 aa4.99□□□□□ -1.61
DHFR2-202ENST00000394221 FLG2Q5D862 2391 aaPredicted RBP4.97□□□□□ -1.61
DHFR2-202ENST00000394221 IGKV2-30P06310 120 aa4.97□□□□□ -1.61
DHFR2-202ENST00000394221 KRTAP10-3P60369 221 aa4.97□□□□□ -1.61
DHFR2-202ENST00000394221 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
DHFR2-202ENST00000394221 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
DHFR2-202ENST00000394221 H0YAA0 97 aa4.95□□□□□ -1.62
DHFR2-202ENST00000394221 PANO1I0J062 215 aa4.94□□□□□ -1.62
DHFR2-202ENST00000394221 PSORS1C2Q9UIG4 136 aa4.94□□□□□ -1.62
DHFR2-202ENST00000394221 TGP01266 2768 aa4.94□□□□□ -1.62
DHFR2-202ENST00000394221 A0A1B0GU33 70 aa4.93□□□□□ -1.62
DHFR2-202ENST00000394221 LUZP6Q538Z0 58 aa4.93□□□□□ -1.62
DHFR2-202ENST00000394221 PKD1L1Q8TDX9 2849 aa4.92□□□□□ -1.62
DHFR2-202ENST00000394221 Q6ZSA8 131 aa4.92□□□□□ -1.62
DHFR2-202ENST00000394221 A0A087WTM6 91 aa4.92□□□□□ -1.62
DHFR2-202ENST00000394221 CHTF8P0CG12 524 aa4.92□□□□□ -1.62
DHFR2-202ENST00000394221 C14orf177Q52M58 125 aa4.91□□□□□ -1.62
DHFR2-202ENST00000394221 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.62
DHFR2-202ENST00000394221 VPS13CQ709C8 3753 aa4.9□□□□□ -1.63
DHFR2-202ENST00000394221 VWFP04275 2813 aa4.89□□□□□ -1.63
DHFR2-202ENST00000394221 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
DHFR2-202ENST00000394221 WWC2-AS2Q96NR7 200 aa4.88□□□□□ -1.63
DHFR2-202ENST00000394221 H1FX-AS1Q4G0G2 97 aa4.86□□□□□ -1.63
DHFR2-202ENST00000394221 KRTAP10-11P60412 298 aa4.86□□□□□ -1.63
DHFR2-202ENST00000394221 ZNF469Q96JG9 3925 aaPredicted RBP4.85□□□□□ -1.63
DHFR2-202ENST00000394221 Q8N1X5 172 aa4.85□□□□□ -1.63
DHFR2-202ENST00000394221 AKAP9Q99996 3911 aa4.84□□□□□ -1.63
DHFR2-202ENST00000394221 CIRBP-AS1Q8TBR5 109 aa4.84□□□□□ -1.63
DHFR2-202ENST00000394221 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.64
DHFR2-202ENST00000394221 ANAPC11Q9NYG5 84 aa4.83□□□□□ -1.64
DHFR2-202ENST00000394221 KRTAP13-1Q8IUC0 172 aa4.82□□□□□ -1.64
DHFR2-202ENST00000394221 J3QL48 77 aa4.81□□□□□ -1.64
DHFR2-202ENST00000394221 TYMSOSQ8TAI1 123 aa4.81□□□□□ -1.64
DHFR2-202ENST00000394221 TENM3Q9P273 2699 aa4.81□□□□□ -1.64
DHFR2-202ENST00000394221 TRRAPQ9Y4A5 3859 aa4.79□□□□□ -1.64
DHFR2-202ENST00000394221 SRRM2Q9UQ35 2752 aaKnown RBP4.79□□□□□ -1.64
DHFR2-202ENST00000394221 TPRXLQ17RH7 258 aa4.78□□□□□ -1.64
DHFR2-202ENST00000394221 NBDYA0A0U1RRE5 68 aa4.75□□□□□ -1.65
DHFR2-202ENST00000394221 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
DHFR2-202ENST00000394221 RPL37P61927 97 aaKnown RBP4.73□□□□□ -1.65
DHFR2-202ENST00000394221 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
DHFR2-202ENST00000394221 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.72□□□□□ -1.65
DHFR2-202ENST00000394221 COX6B2Q6YFQ2 88 aa4.7□□□□□ -1.66
DHFR2-202ENST00000394221 ANK3Q12955 4377 aaKnown RBP4.69□□□□□ -1.66
DHFR2-202ENST00000394221 A0A0D9SG42 100 aa4.68□□□□□ -1.66
DHFR2-202ENST00000394221 LCE2BO14633 110 aa4.68□□□□□ -1.66
DHFR2-202ENST00000394221 FBN3Q75N90 2809 aa4.67□□□□□ -1.66
DHFR2-202ENST00000394221 KRTAP1-5Q9BYS1 174 aa4.67□□□□□ -1.66
DHFR2-202ENST00000394221 APLNQ9ULZ1 77 aa4.66□□□□□ -1.66
DHFR2-202ENST00000394221 SPACA4Q8TDM5 124 aa4.64□□□□□ -1.67
DHFR2-202ENST00000394221 DMBT1Q9UGM3 2413 aaPredicted RBP4.62□□□□□ -1.67
DHFR2-202ENST00000394221 DNHD1Q96M86 4753 aa4.58□□□□□ -1.68
DHFR2-202ENST00000394221 CSMD3Q7Z407 3707 aa4.54□□□□□ -1.68
DHFR2-202ENST00000394221 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
DHFR2-202ENST00000394221 COL7A1Q02388 2944 aa4.54□□□□□ -1.68
DHFR2-202ENST00000394221 LCE2AQ5TA79 106 aaPredicted RBP4.52□□□□□ -1.69
DHFR2-202ENST00000394221 S4R3F8 94 aa4.52□□□□□ -1.69
DHFR2-202ENST00000394221 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
DHFR2-202ENST00000394221 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
DHFR2-202ENST00000394221 PLAC4Q8WY50 150 aa4.47□□□□□ -1.69
DHFR2-202ENST00000394221 KRTAP13-2Q52LG2 175 aa4.46□□□□□ -1.7
DHFR2-202ENST00000394221 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
DHFR2-202ENST00000394221 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
DHFR2-202ENST00000394221 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
DHFR2-202ENST00000394221 CAMK2N1Q7Z7J9 78 aa4.42□□□□□ -1.7
DHFR2-202ENST00000394221 DNAH1Q9P2D7 4330 aa4.42□□□□□ -1.7
DHFR2-202ENST00000394221 XP32Q5T750 250 aa4.42□□□□□ -1.7
DHFR2-202ENST00000394221 Q6ZRN7 208 aaPredicted RBP4.42□□□□□ -1.7
DHFR2-202ENST00000394221 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
DHFR2-202ENST00000394221 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
DHFR2-202ENST00000394221 DNAH10Q8IVF4 4471 aa4.38□□□□□ -1.71
DHFR2-202ENST00000394221 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
DHFR2-202ENST00000394221 KRTAP12-1P59990 96 aa4.34□□□□□ -1.72
DHFR2-202ENST00000394221 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
DHFR2-202ENST00000394221 DNAH8Q96JB1 4490 aa4.32□□□□□ -1.72
DHFR2-202ENST00000394221 PRKDCP78527 4128 aaKnown RBP4.28□□□□□ -1.72
DHFR2-202ENST00000394221 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
DHFR2-202ENST00000394221 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
DHFR2-202ENST00000394221 KRTAP10-8P60410 259 aa4.24□□□□□ -1.73
DHFR2-202ENST00000394221 DNAH17Q9UFH2 4485 aa4.24□□□□□ -1.73
DHFR2-202ENST00000394221 M0QZ58 72 aa4.23□□□□□ -1.73
DHFR2-202ENST00000394221 RPS29P62273 56 aaKnown RBP4.22□□□□□ -1.73
DHFR2-202ENST00000394221 DNAH9Q9NYC9 4486 aa4.21□□□□□ -1.73
DHFR2-202ENST00000394221 PRO2289Q9P1D8 64 aa4.21□□□□□ -1.74
DHFR2-202ENST00000394221 ANK2Q01484 3957 aa4.21□□□□□ -1.74
DHFR2-202ENST00000394221 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms