RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 OXTP01178 125 aa5.45□□□□□ -1.54
CDH11-202ENST00000394156 Q5XG85 94 aa5.44□□□□□ -1.54
CDH11-202ENST00000394156 MMP24-AS1A0A0U1RRL7 71 aa5.44□□□□□ -1.54
CDH11-202ENST00000394156 NOTCH2NLQ7Z3S9 236 aa5.43□□□□□ -1.54
CDH11-202ENST00000394156 SPRR1AP35321 89 aa5.42□□□□□ -1.54
CDH11-202ENST00000394156 UQCR11O14957 56 aa5.42□□□□□ -1.54
CDH11-202ENST00000394156 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
CDH11-202ENST00000394156 FP248Q71RG6 208 aaPredicted RBP5.41□□□□□ -1.54
CDH11-202ENST00000394156 KRTAP7-1Q8IUC3 87 aa5.41□□□□□ -1.54
CDH11-202ENST00000394156 LCE6AA0A183 80 aa5.4□□□□□ -1.54
CDH11-202ENST00000394156 FBN1P35555 2871 aaKnown RBP5.38□□□□□ -1.55
CDH11-202ENST00000394156 Q5W150 140 aa5.38□□□□□ -1.55
CDH11-202ENST00000394156 LINC00472Q9H8W2 130 aa5.37□□□□□ -1.55
CDH11-202ENST00000394156 CYP4F30PQ9H0H9 118 aa5.37□□□□□ -1.55
CDH11-202ENST00000394156 ZCCHC13Q8WW36 166 aaKnown RBP5.35□□□□□ -1.55
CDH11-202ENST00000394156 SPINK7P58062 85 aa5.34□□□□□ -1.55
CDH11-202ENST00000394156 PKD1L1Q8TDX9 2849 aa5.34□□□□□ -1.55
CDH11-202ENST00000394156 S4R3F8 94 aa5.33□□□□□ -1.56
CDH11-202ENST00000394156 PDZD2O15018 2839 aa5.33□□□□□ -1.56
CDH11-202ENST00000394156 KRTAP4-16G5E9R7 235 aaPredicted RBP5.33□□□□□ -1.56
CDH11-202ENST00000394156 Q6ZR54 194 aa5.32□□□□□ -1.56
CDH11-202ENST00000394156 VWFP04275 2813 aa5.32□□□□□ -1.56
CDH11-202ENST00000394156 A0A0A0MQY5 61 aa5.32□□□□□ -1.56
CDH11-202ENST00000394156 Q6ZRN7 208 aaPredicted RBP5.31□□□□□ -1.56
CDH11-202ENST00000394156 SPANXA2-OT1Q8N9U9 137 aa5.3□□□□□ -1.56
CDH11-202ENST00000394156 FLG2Q5D862 2391 aaPredicted RBP5.3□□□□□ -1.56
CDH11-202ENST00000394156 Q1T7F1 81 aa5.3□□□□□ -1.56
CDH11-202ENST00000394156 LUZP6Q538Z0 58 aa5.29□□□□□ -1.56
CDH11-202ENST00000394156 PRAC1Q96KF2 57 aa5.28□□□□□ -1.56
CDH11-202ENST00000394156 TENM1Q9UKZ4 2725 aa5.27□□□□□ -1.57
CDH11-202ENST00000394156 SPATA8Q6RVD6 105 aa5.27□□□□□ -1.57
CDH11-202ENST00000394156 A0A1B0GU33 70 aa5.26□□□□□ -1.57
CDH11-202ENST00000394156 LINC00483Q53H64 154 aa5.25□□□□□ -1.57
CDH11-202ENST00000394156 OTOGQ6ZRI0 2925 aa5.25□□□□□ -1.57
CDH11-202ENST00000394156 TENM2Q9NT68 2774 aa5.24□□□□□ -1.57
CDH11-202ENST00000394156 CAMK2N1Q7Z7J9 78 aa5.24□□□□□ -1.57
CDH11-202ENST00000394156 DMBT1Q9UGM3 2413 aaPredicted RBP5.24□□□□□ -1.57
CDH11-202ENST00000394156 SPRR1BP22528 89 aa5.23□□□□□ -1.57
CDH11-202ENST00000394156 KRTAP13-2Q52LG2 175 aa5.23□□□□□ -1.57
CDH11-202ENST00000394156 CDC42SE1Q9NRR8 79 aa5.23□□□□□ -1.57
CDH11-202ENST00000394156 Q5VV11 94 aa5.22□□□□□ -1.57
CDH11-202ENST00000394156 TENM3Q9P273 2699 aa5.21□□□□□ -1.58
CDH11-202ENST00000394156 KRTAP16-1A8MUX0 517 aa5.2□□□□□ -1.58
CDH11-202ENST00000394156 ADM2Q7Z4H4 148 aa5.19□□□□□ -1.58
CDH11-202ENST00000394156 Q75L30 129 aa5.17□□□□□ -1.58
CDH11-202ENST00000394156 HUWE1Q7Z6Z7 4374 aaKnown RBP5.17□□□□□ -1.58
CDH11-202ENST00000394156 CSAG1Q6PB30 78 aa5.16□□□□□ -1.58
CDH11-202ENST00000394156 R4GN34 69 aa5.15□□□□□ -1.58
CDH11-202ENST00000394156 KRTAP29-1A8MX34 341 aaPredicted RBP5.15□□□□□ -1.58
CDH11-202ENST00000394156 PLAC4Q8WY50 150 aa5.15□□□□□ -1.59
CDH11-202ENST00000394156 LINC01558Q9Y6Z2 57 aa5.14□□□□□ -1.59
CDH11-202ENST00000394156 M0QZ58 72 aa5.14□□□□□ -1.59
CDH11-202ENST00000394156 A8MU10 97 aa5.13□□□□□ -1.59
CDH11-202ENST00000394156 SEC61BP60468 96 aaKnown RBP5.1□□□□□ -1.59
CDH11-202ENST00000394156 LYSTQ99698 3801 aa5.1□□□□□ -1.59
CDH11-202ENST00000394156 KRTAP13-1Q8IUC0 172 aa5.09□□□□□ -1.59
CDH11-202ENST00000394156 A0A1B0GVY2 172 aa5.08□□□□□ -1.6
CDH11-202ENST00000394156 TGP01266 2768 aa5.06□□□□□ -1.6
CDH11-202ENST00000394156 H1FX-AS1Q4G0G2 97 aa5.05□□□□□ -1.6
CDH11-202ENST00000394156 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
CDH11-202ENST00000394156 COL7A1Q02388 2944 aa5.04□□□□□ -1.6
CDH11-202ENST00000394156 ANK2Q01484 3957 aa5.03□□□□□ -1.6
CDH11-202ENST00000394156 CMYA5Q8N3K9 4069 aa5.02□□□□□ -1.61
CDH11-202ENST00000394156 FRAS1Q86XX4 4008 aa5.02□□□□□ -1.61
CDH11-202ENST00000394156 DNAH10Q8IVF4 4471 aa4.98□□□□□ -1.61
CDH11-202ENST00000394156 A8MUU9 505 aa4.96□□□□□ -1.61
CDH11-202ENST00000394156 C20orf166-AS1Q96NR2 134 aa4.96□□□□□ -1.62
CDH11-202ENST00000394156 KRTAP1-4P0C5Y4 121 aa4.96□□□□□ -1.62
CDH11-202ENST00000394156 RPL37P61927 97 aaKnown RBP4.96□□□□□ -1.62
CDH11-202ENST00000394156 KMT2AQ03164 3969 aa4.93□□□□□ -1.62
CDH11-202ENST00000394156 ROMO1P60602 79 aa4.93□□□□□ -1.62
CDH11-202ENST00000394156 FBN3Q75N90 2809 aa4.92□□□□□ -1.62
CDH11-202ENST00000394156 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
CDH11-202ENST00000394156 A6NN06 94 aa4.88□□□□□ -1.63
CDH11-202ENST00000394156 ASB16-AS1Q495Z4 193 aa4.88□□□□□ -1.63
CDH11-202ENST00000394156 XP32Q5T750 250 aa4.88□□□□□ -1.63
CDH11-202ENST00000394156 SRRM2Q9UQ35 2752 aaKnown RBP4.85□□□□□ -1.63
CDH11-202ENST00000394156 MEGF8Q7Z7M0 2845 aa4.84□□□□□ -1.64
CDH11-202ENST00000394156 DNAH7Q8WXX0 4024 aa4.84□□□□□ -1.64
CDH11-202ENST00000394156 DNAH9Q9NYC9 4486 aa4.84□□□□□ -1.64
CDH11-202ENST00000394156 KRTAP21-3Q3LHN1 58 aa4.83□□□□□ -1.64
CDH11-202ENST00000394156 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
CDH11-202ENST00000394156 C10orf95Q9H7T3 257 aa4.81□□□□□ -1.64
CDH11-202ENST00000394156 DNAH1Q9P2D7 4330 aa4.77□□□□□ -1.65
CDH11-202ENST00000394156 PRKDCP78527 4128 aaKnown RBP4.73□□□□□ -1.65
CDH11-202ENST00000394156 KRTAP10-8P60410 259 aa4.73□□□□□ -1.65
CDH11-202ENST00000394156 P0C880 135 aa4.7□□□□□ -1.66
CDH11-202ENST00000394156 H0YAA0 97 aa4.7□□□□□ -1.66
CDH11-202ENST00000394156 DNAH3Q8TD57 4116 aa4.69□□□□□ -1.66
CDH11-202ENST00000394156 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
CDH11-202ENST00000394156 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
CDH11-202ENST00000394156 KRTAP13-3Q3SY46 172 aa4.68□□□□□ -1.66
CDH11-202ENST00000394156 PLECQ15149 4684 aaKnown RBP4.68□□□□□ -1.66
CDH11-202ENST00000394156 DNAH6Q9C0G6 4158 aa4.64□□□□□ -1.67
CDH11-202ENST00000394156 KRTAP4-5Q9BYR2 181 aa4.63□□□□□ -1.67
CDH11-202ENST00000394156 ALMS1Q8TCU4 4167 aa4.63□□□□□ -1.67
CDH11-202ENST00000394156 STARD9Q9P2P6 4700 aa4.63□□□□□ -1.67
CDH11-202ENST00000394156 VPS13BQ7Z7G8 4022 aa4.62□□□□□ -1.67
CDH11-202ENST00000394156 TPRXLQ17RH7 258 aa4.61□□□□□ -1.67
CDH11-202ENST00000394156 VPS13DQ5THJ4 4388 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms