RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 Q1T7F1 81 aa11.87□□□□□ -0.51
ME3-202ENST00000393324 WFDC13Q8IUB5 93 aa11.86□□□□□ -0.51
ME3-202ENST00000393324 C1orf64Q8NEQ6 169 aa11.86□□□□□ -0.51
ME3-202ENST00000393324 NDUFB1O75438 58 aa11.85□□□□□ -0.51
ME3-202ENST00000393324 PLA2G1BP04054 148 aaKnown RBP11.84□□□□□ -0.51
ME3-202ENST00000393324 C1orf195Q5TG92 126 aa11.84□□□□□ -0.51
ME3-202ENST00000393324 SPINK6Q6UWN8 80 aa11.84□□□□□ -0.51
ME3-202ENST00000393324 CYP4F30PQ9H0H9 118 aa11.84□□□□□ -0.51
ME3-202ENST00000393324 V9GYY9 64 aa11.82□□□□□ -0.52
ME3-202ENST00000393324 SEC61GP60059 68 aa11.81□□□□□ -0.52
ME3-202ENST00000393324 KRTAP29-1A8MX34 341 aaPredicted RBP11.8□□□□□ -0.52
ME3-202ENST00000393324 FAT1Q14517 4588 aa11.8□□□□□ -0.52
ME3-202ENST00000393324 CASC2Q6XLA1 102 aa11.8□□□□□ -0.52
ME3-202ENST00000393324 RYR3Q15413 4870 aa11.78□□□□□ -0.52
ME3-202ENST00000393324 CDK2AP2O75956 126 aa11.78□□□□□ -0.52
ME3-202ENST00000393324 MMP24-AS1A0A0U1RRL7 71 aa11.76□□□□□ -0.53
ME3-202ENST00000393324 A0A1B0GVX0 72 aa11.74□□□□□ -0.53
ME3-202ENST00000393324 KRTAP10-4P60372 401 aaPredicted RBP11.74□□□□□ -0.53
ME3-202ENST00000393324 ASB16-AS1Q495Z4 193 aa11.74□□□□□ -0.53
ME3-202ENST00000393324 TYMSOSQ8TAI1 123 aa11.74□□□□□ -0.53
ME3-202ENST00000393324 IGHV6-1A0A0B4J1U7 121 aa11.74□□□□□ -0.53
ME3-202ENST00000393324 C8orf17Q9NRJ1 99 aa11.71□□□□□ -0.54
ME3-202ENST00000393324 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
ME3-202ENST00000393324 PRR26Q8N8Z3 221 aa11.69□□□□□ -0.54
ME3-202ENST00000393324 C4orf48Q5BLP8 95 aa11.68□□□□□ -0.54
ME3-202ENST00000393324 PRR4Q16378 134 aa11.66□□□□□ -0.54
ME3-202ENST00000393324 LIMD2Q9BT23 127 aa11.65□□□□□ -0.54
ME3-202ENST00000393324 NOTCH2NLQ7Z3S9 236 aa11.64□□□□□ -0.55
ME3-202ENST00000393324 PSPHP1O15172 72 aa11.64□□□□□ -0.55
ME3-202ENST00000393324 MP68P56378 58 aa11.63□□□□□ -0.55
ME3-202ENST00000393324 SPINK1P00995 79 aa11.62□□□□□ -0.55
ME3-202ENST00000393324 SPANXA2-OT1Q8N9U9 137 aa11.61□□□□□ -0.55
ME3-202ENST00000393324 LINC00304Q8N9R0 145 aa11.59□□□□□ -0.55
ME3-202ENST00000393324 H3BPC8 53 aa11.59□□□□□ -0.55
ME3-202ENST00000393324 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
ME3-202ENST00000393324 LINC00208Q96KT6 92 aa11.58□□□□□ -0.56
ME3-202ENST00000393324 MRPL34Q9BQ48 92 aaKnown RBP11.58□□□□□ -0.56
ME3-202ENST00000393324 A8MUN3 132 aa11.57□□□□□ -0.56
ME3-202ENST00000393324 HSPG2P98160 4391 aa11.55□□□□□ -0.56
ME3-202ENST00000393324 Q5VV11 94 aa11.55□□□□□ -0.56
ME3-202ENST00000393324 PMAIP1Q13794 54 aa11.55□□□□□ -0.56
ME3-202ENST00000393324 NDUFS5O43920 106 aa11.54□□□□□ -0.56
ME3-202ENST00000393324 SPAG11AQ6PDA7 123 aa11.54□□□□□ -0.56
ME3-202ENST00000393324 H0Y9P7 68 aa11.54□□□□□ -0.56
ME3-202ENST00000393324 C8orf87E5RJ46 101 aa11.53□□□□□ -0.56
ME3-202ENST00000393324 TP53AIP1Q9HCN2 124 aa11.53□□□□□ -0.56
ME3-202ENST00000393324 PKHD1L1Q86WI1 4243 aa11.51□□□□□ -0.57
ME3-202ENST00000393324 RPS29P62273 56 aaKnown RBP11.51□□□□□ -0.57
ME3-202ENST00000393324 LINC00313P59037 77 aa11.5□□□□□ -0.57
ME3-202ENST00000393324 Q8N9P0 234 aaPredicted RBP11.5□□□□□ -0.57
ME3-202ENST00000393324 Q5VSD8 79 aa11.49□□□□□ -0.57
ME3-202ENST00000393324 RYR1P21817 5038 aa11.48□□□□□ -0.57
ME3-202ENST00000393324 A8MU10 97 aa11.45□□□□□ -0.58
ME3-202ENST00000393324 KIAA1109Q2LD37 5005 aa11.37□□□□□ -0.59
ME3-202ENST00000393324 IGLV7-46A0A075B6I9 117 aa11.37□□□□□ -0.59
ME3-202ENST00000393324 LOC101927531A0A1B0GV80 90 aa11.37□□□□□ -0.59
ME3-202ENST00000393324 CHKB-CPT1BH3BT56 60 aa11.37□□□□□ -0.59
ME3-202ENST00000393324 Q75L30 129 aa11.37□□□□□ -0.59
ME3-202ENST00000393324 PRR15LQ9BU68 103 aa11.37□□□□□ -0.59
ME3-202ENST00000393324 KRTAP16-1A8MUX0 517 aa11.36□□□□□ -0.59
ME3-202ENST00000393324 KRTAP17-1Q9BYP8 105 aa11.36□□□□□ -0.59
ME3-202ENST00000393324 EPPK1P58107 5090 aaKnown RBP11.36□□□□□ -0.59
ME3-202ENST00000393324 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
ME3-202ENST00000393324 COA5Q86WW8 74 aa11.35□□□□□ -0.59
ME3-202ENST00000393324 Q5W150 140 aa11.34□□□□□ -0.59
ME3-202ENST00000393324 TNXBP22105 4242 aa11.31□□□□□ -0.6
ME3-202ENST00000393324 KRTAP13-3Q3SY46 172 aa11.29□□□□□ -0.6
ME3-202ENST00000393324 KRTAP10-8P60410 259 aa11.29□□□□□ -0.6
ME3-202ENST00000393324 LCA10Q71F78 164 aa11.29□□□□□ -0.6
ME3-202ENST00000393324 Q8N1X5 172 aa11.28□□□□□ -0.6
ME3-202ENST00000393324 FLG2Q5D862 2391 aaPredicted RBP11.28□□□□□ -0.6
ME3-202ENST00000393324 RETNLBQ9BQ08 111 aa11.25□□□□□ -0.61
ME3-202ENST00000393324 ATP11AUNQ6ZP68 121 aa11.25□□□□□ -0.61
ME3-202ENST00000393324 PCOTHQ58A44 107 aa11.24□□□□□ -0.61
ME3-202ENST00000393324 KTN1-AS1Q86SY8 53 aa11.24□□□□□ -0.61
ME3-202ENST00000393324 FAT3Q8TDW7 4589 aa11.23□□□□□ -0.61
ME3-202ENST00000393324 LINC01558Q9Y6Z2 57 aa11.21□□□□□ -0.61
ME3-202ENST00000393324 A6NED7 52 aa11.2□□□□□ -0.62
ME3-202ENST00000393324 CDC42SE1Q9NRR8 79 aa11.2□□□□□ -0.62
ME3-202ENST00000393324 A6NN06 94 aa11.19□□□□□ -0.62
ME3-202ENST00000393324 C9orf92A6NGG3 77 aa11.17□□□□□ -0.62
ME3-202ENST00000393324 SPTSSBQ8NFR3 76 aa11.16□□□□□ -0.62
ME3-202ENST00000393324 MYCBP2O75592 4640 aa11.14□□□□□ -0.63
ME3-202ENST00000393324 DMBT1Q9UGM3 2413 aaPredicted RBP11.14□□□□□ -0.63
ME3-202ENST00000393324 HRES1P13985 223 aa11.11□□□□□ -0.63
ME3-202ENST00000393324 IGKV2-30P06310 120 aa11.09□□□□□ -0.63
ME3-202ENST00000393324 MT1HL1P0DM35 61 aa11.08□□□□□ -0.64
ME3-202ENST00000393324 C20orf166-AS1Q96NR2 134 aa11.06□□□□□ -0.64
ME3-202ENST00000393324 RBM12B-AS1Q9P1G2 102 aa11.05□□□□□ -0.64
ME3-202ENST00000393324 A8MUU9 505 aa11.05□□□□□ -0.64
ME3-202ENST00000393324 SPINK7P58062 85 aa11.03□□□□□ -0.64
ME3-202ENST00000393324 IGKV2D-30A0A075B6S6 120 aa11.03□□□□□ -0.64
ME3-202ENST00000393324 C7orf65Q6ZTY9 151 aa10.99□□□□□ -0.65
ME3-202ENST00000393324 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
ME3-202ENST00000393324 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
ME3-202ENST00000393324 ACYP2P14621 99 aa10.83□□□□□ -0.68
ME3-202ENST00000393324 XP32Q5T750 250 aa10.8□□□□□ -0.68
ME3-202ENST00000393324 ABCA13Q86UQ4 5058 aa10.78□□□□□ -0.68
ME3-202ENST00000393324 RPL37P61927 97 aaKnown RBP10.77□□□□□ -0.69
ME3-202ENST00000393324 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms