RNA–Protein interactions for RNA: ENST00000391111.1

RNU11-3P-201, Transcript of RNA, U11 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU11-3P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-3P-201ENST00000391111 SPRR2GQ9BYE4 73 aa0.04□□□□□ -2.4
RNU11-3P-201ENST00000391111 KMT2DO14686 5537 aa0.04□□□□□ -2.4
RNU11-3P-201ENST00000391111 ZZEF1O43149 2961 aa0.04□□□□□ -2.4
RNU11-3P-201ENST00000391111 GCN1Q92616 2671 aaKnown RBP0.04□□□□□ -2.4
RNU11-3P-201ENST00000391111 TGP01266 2768 aa0.04□□□□□ -2.4
RNU11-3P-201ENST00000391111 CPS1P31327 1500 aa0.03□□□□□ -2.4
RNU11-3P-201ENST00000391111 NRXN3Q9Y4C0 1643 aa0.03□□□□□ -2.4
RNU11-3P-201ENST00000391111 NMES1Q9C002 83 aa0.03□□□□□ -2.4
RNU11-3P-201ENST00000391111 C6orf48Q9UBA6 75 aa0.03□□□□□ -2.4
RNU11-3P-201ENST00000391111 AKAP9Q99996 3911 aa0.03□□□□□ -2.4
RNU11-3P-201ENST00000391111 NBEAL1Q6ZS30 2694 aa0.03□□□□□ -2.4
RNU11-3P-201ENST00000391111 LRP1BQ9NZR2 4599 aa0.03□□□□□ -2.41
RNU11-3P-201ENST00000391111 LMO7Q8WWI1 1683 aa0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 RIF1Q5UIP0 2472 aaKnown RBP0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 WT1-ASQ06250 92 aa0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 DEFB106AQ8N104 65 aa0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 S4R3F8 94 aa0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 M0R1W7 72 aa0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 ANKRD11Q6UB99 2663 aaPredicted RBP0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 NBPF19A0A087WUL8 3843 aa0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 DNAH9Q9NYC9 4486 aa0□□□□□ -2.41
RNU11-3P-201ENST00000391111 H3BUA1 57 aa0□□□□□ -2.41
RNU11-3P-201ENST00000391111 FASNP49327 2511 aaKnown RBP0□□□□□ -2.41
RNU11-3P-201ENST00000391111 PKHD1L1Q86WI1 4243 aa0□□□□□ -2.41
RNU11-3P-201ENST00000391111 AHNAK2Q8IVF2 5795 aa-0□□□□□ -2.41
RNU11-3P-201ENST00000391111 CUBNO60494 3623 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 SVEP1Q4LDE5 3571 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 FAM208AQ9UK61 1670 aaKnown RBP-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 ABCC8Q09428 1581 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 ANK3Q12955 4377 aaKnown RBP-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 IGIPA6NJ69 53 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 SPRR2EP22531 72 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 FCER1GP30273 86 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 KRTAP6-2Q3LI66 62 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 TMEM167BQ9NRX6 74 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 MDN1Q9NU22 5596 aa-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 SRRM2Q9UQ35 2752 aaKnown RBP-0.01□□□□□ -2.41
RNU11-3P-201ENST00000391111 KIF21BO75037 1637 aa-0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 PDZD2O15018 2839 aa-0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 ACACBO00763 2458 aa-0.02□□□□□ -2.41
RNU11-3P-201ENST00000391111 AGLP35573 1532 aa-0.03□□□□□ -2.41
RNU11-3P-201ENST00000391111 TLN2Q9Y4G6 2542 aa-0.03□□□□□ -2.41
RNU11-3P-201ENST00000391111 FANCD2Q9BXW9 1451 aa-0.03□□□□□ -2.41
RNU11-3P-201ENST00000391111 MYO18BQ8IUG5 2567 aa-0.03□□□□□ -2.41
RNU11-3P-201ENST00000391111 CCDC168Q8NDH2 2452 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 MXRA5Q9NR99 2828 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 SACSQ9NZJ4 4579 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 DDX60Q8IY21 1712 aaKnown RBP-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 HIVEP1P15822 2718 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 IQGAP1P46940 1657 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 H3BNG1 76 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 MT1AP04731 61 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 NOP10Q9NPE3 64 aaKnown RBP-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 NBEAL2Q6ZNJ1 2754 aa-0.04□□□□□ -2.42
RNU11-3P-201ENST00000391111 DNAH6Q9C0G6 4158 aa-0.05□□□□□ -2.42
RNU11-3P-201ENST00000391111 FAT3Q8TDW7 4589 aa-0.05□□□□□ -2.42
RNU11-3P-201ENST00000391111 EFCAB6Q5THR3 1501 aa-0.05□□□□□ -2.42
RNU11-3P-201ENST00000391111 UTP20O75691 2785 aaKnown RBP-0.05□□□□□ -2.42
RNU11-3P-201ENST00000391111 TACC2O95359 2948 aa-0.05□□□□□ -2.42
RNU11-3P-201ENST00000391111 DMXL1Q9Y485 3027 aa-0.06□□□□□ -2.42
RNU11-3P-201ENST00000391111 IGLV5-48A0A075B6I7 105 aa-0.06□□□□□ -2.42
RNU11-3P-201ENST00000391111 H0YGX0 51 aa-0.06□□□□□ -2.42
RNU11-3P-201ENST00000391111 KRTAP6-1Q3LI64 71 aa-0.06□□□□□ -2.42
RNU11-3P-201ENST00000391111 MGAM2Q2M2H8 2515 aa-0.07□□□□□ -2.42
RNU11-3P-201ENST00000391111 DNAH7Q8WXX0 4024 aa-0.07□□□□□ -2.42
RNU11-3P-201ENST00000391111 SPRR2FQ96RM1 72 aa-0.07□□□□□ -2.42
RNU11-3P-201ENST00000391111 LAMA5O15230 3695 aa-0.07□□□□□ -2.42
RNU11-3P-201ENST00000391111 NBEAQ8NFP9 2946 aa-0.07□□□□□ -2.42
RNU11-3P-201ENST00000391111 USP9XQ93008 2570 aaPredicted RBP-0.08□□□□□ -2.42
RNU11-3P-201ENST00000391111 PLNP26678 52 aa-0.08□□□□□ -2.42
RNU11-3P-201ENST00000391111 LINC00308Q8TCZ7 52 aa-0.08□□□□□ -2.42
RNU11-3P-201ENST00000391111 DNAH1Q9P2D7 4330 aa-0.09□□□□□ -2.42
RNU11-3P-201ENST00000391111 MMP24-AS1A0A0U1RRL7 71 aa-0.09□□□□□ -2.42
RNU11-3P-201ENST00000391111 DNAH2Q9P225 4427 aa-0.1□□□□□ -2.42
RNU11-3P-201ENST00000391111 DNAH11Q96DT5 4516 aa-0.1□□□□□ -2.42
RNU11-3P-201ENST00000391111 APOBP04114 4563 aaKnown RBP-0.1□□□□□ -2.43
RNU11-3P-201ENST00000391111 CMC2Q9NRP2 79 aa-0.1□□□□□ -2.43
RNU11-3P-201ENST00000391111 ABRACLQ9P1F3 81 aa-0.1□□□□□ -2.43
RNU11-3P-201ENST00000391111 VPS13DQ5THJ4 4388 aa-0.1□□□□□ -2.43
RNU11-3P-201ENST00000391111 MUC2Q02817 5179 aa-0.11□□□□□ -2.43
RNU11-3P-201ENST00000391111 HTTP42858 3142 aa-0.11□□□□□ -2.43
RNU11-3P-201ENST00000391111 CLTCL1P53675 1640 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 ITPR3Q14573 2671 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 M0QY20 66 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 TNP1P09430 55 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 DEFB110Q30KQ9 67 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 KRTAP19-7Q3SYF9 63 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 A0A0C4DFX4 3053 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 COL6A5A8TX70 2615 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 IQGAP2Q13576 1575 aa-0.12□□□□□ -2.43
RNU11-3P-201ENST00000391111 SSPOA2VEC9 5147 aa-0.13□□□□□ -2.43
RNU11-3P-201ENST00000391111 SMIM27A0A1W2PRY6 76 aa-0.13□□□□□ -2.43
RNU11-3P-201ENST00000391111 PCLOQ9Y6V0 5065 aa-0.13□□□□□ -2.43
RNU11-3P-201ENST00000391111 DNAH8Q96JB1 4490 aa-0.13□□□□□ -2.43
RNU11-3P-201ENST00000391111 SPTAN1Q13813 2472 aaKnown RBP-0.13□□□□□ -2.43
RNU11-3P-201ENST00000391111 SPENQ96T58 3664 aaKnown RBP-0.14□□□□□ -2.43
RNU11-3P-201ENST00000391111 A8MTW9 85 aa-0.14□□□□□ -2.43
RNU11-3P-201ENST00000391111 CMYA5Q8N3K9 4069 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms