RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 KALRNO60229 2985 aa0.2□□□□□ -2.38
SNORA40.19-201ENST00000390846 FLNBO75369 2602 aaKnown RBP0.19□□□□□ -2.38
SNORA40.19-201ENST00000390846 TENM2Q9NT68 2774 aa0.19□□□□□ -2.38
SNORA40.19-201ENST00000390846 PLNP26678 52 aa0.19□□□□□ -2.38
SNORA40.19-201ENST00000390846 CMC2Q9NRP2 79 aa0.19□□□□□ -2.38
SNORA40.19-201ENST00000390846 COL6A3P12111 3177 aa0.18□□□□□ -2.38
SNORA40.19-201ENST00000390846 NBEAL2Q6ZNJ1 2754 aa0.18□□□□□ -2.38
SNORA40.19-201ENST00000390846 LPAP08519 4548 aa0.18□□□□□ -2.38
SNORA40.19-201ENST00000390846 SMIM27A0A1W2PRY6 76 aa0.18□□□□□ -2.38
SNORA40.19-201ENST00000390846 TIMM8BQ9Y5J9 83 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.19-201ENST00000390846 MUC5BQ9HC84 5762 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.19-201ENST00000390846 HECTD4Q9Y4D8 3996 aa0.17□□□□□ -2.38
SNORA40.19-201ENST00000390846 LINC01546A6NGU7 62 aa0.17□□□□□ -2.38
SNORA40.19-201ENST00000390846 PRLHP81277 87 aa0.17□□□□□ -2.38
SNORA40.19-201ENST00000390846 SERF2P84101 59 aa0.17□□□□□ -2.38
SNORA40.19-201ENST00000390846 MDN1Q9NU22 5596 aa0.17□□□□□ -2.38
SNORA40.19-201ENST00000390846 HSPG2P98160 4391 aa0.17□□□□□ -2.38
SNORA40.19-201ENST00000390846 SPTBN4Q9H254 2564 aa0.16□□□□□ -2.38
SNORA40.19-201ENST00000390846 H0YGX0 51 aa0.16□□□□□ -2.38
SNORA40.19-201ENST00000390846 SETD2Q9BYW2 2564 aaPredicted RBP0.16□□□□□ -2.38
SNORA40.19-201ENST00000390846 SVEP1Q4LDE5 3571 aa0.15□□□□□ -2.38
SNORA40.19-201ENST00000390846 CUBNO60494 3623 aa0.15□□□□□ -2.39
SNORA40.19-201ENST00000390846 SACSQ9NZJ4 4579 aa0.15□□□□□ -2.39
SNORA40.19-201ENST00000390846 KRTAP6-2Q3LI66 62 aa0.15□□□□□ -2.39
SNORA40.19-201ENST00000390846 TMEM167BQ9NRX6 74 aa0.15□□□□□ -2.39
SNORA40.19-201ENST00000390846 ABRACLQ9P1F3 81 aa0.15□□□□□ -2.39
SNORA40.19-201ENST00000390846 KAAG1Q9UBP8 84 aa0.15□□□□□ -2.39
SNORA40.19-201ENST00000390846 DNAH11Q96DT5 4516 aa0.14□□□□□ -2.39
SNORA40.19-201ENST00000390846 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 HTTP42858 3142 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 RANBP2P49792 3224 aaKnown RBP0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 SPRR2BP35325 72 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 WFDC10BQ8IUB3 73 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 ZANQ9Y493 2812 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 SONP18583 2426 aaKnown RBP0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 CLTCL1P53675 1640 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 ATP7AQ04656 1500 aa0.13□□□□□ -2.39
SNORA40.19-201ENST00000390846 HIVEP1P15822 2718 aa0.12□□□□□ -2.39
SNORA40.19-201ENST00000390846 SPG11Q96JI7 2443 aa0.12□□□□□ -2.39
SNORA40.19-201ENST00000390846 PKHD1L1Q86WI1 4243 aa0.12□□□□□ -2.39
SNORA40.19-201ENST00000390846 FLGP20930 4061 aaPredicted RBP0.12□□□□□ -2.39
SNORA40.19-201ENST00000390846 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
SNORA40.19-201ENST00000390846 TGP01266 2768 aa0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 FLNAP21333 2647 aaKnown RBP0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 CHD7Q9P2D1 2997 aa0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 LRRK2Q5S007 2527 aa0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 ANKHD1Q8IWZ3 2542 aaKnown RBP0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 IGLV5-48A0A075B6I7 105 aa0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 TOMM5Q8N4H5 51 aa0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 COL12A1Q99715 3063 aa0.11□□□□□ -2.39
SNORA40.19-201ENST00000390846 ANKRD11Q6UB99 2663 aaPredicted RBP0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 LRP2P98164 4655 aa0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 TEP1Q99973 2627 aaKnown RBP0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 MMP24-AS1A0A0U1RRL7 71 aa0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 H0YGG7 62 aa0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 DNAH3Q8TD57 4116 aa0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 FASNP49327 2511 aaKnown RBP0.1□□□□□ -2.39
SNORA40.19-201ENST00000390846 ANK3Q12955 4377 aaKnown RBP0.09□□□□□ -2.39
SNORA40.19-201ENST00000390846 DNAH2Q9P225 4427 aa0.09□□□□□ -2.39
SNORA40.19-201ENST00000390846 TRPM2O94759 1503 aa0.09□□□□□ -2.39
SNORA40.19-201ENST00000390846 AKAP9Q99996 3911 aa0.09□□□□□ -2.39
SNORA40.19-201ENST00000390846 SPENQ96T58 3664 aaKnown RBP0.09□□□□□ -2.39
SNORA40.19-201ENST00000390846 MYO18BQ8IUG5 2567 aa0.09□□□□□ -2.4
SNORA40.19-201ENST00000390846 COL6A5A8TX70 2615 aa0.09□□□□□ -2.4
SNORA40.19-201ENST00000390846 APOBP04114 4563 aaKnown RBP0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 FRYQ5TBA9 3013 aa0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 H3BNG1 76 aa0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 WDR87Q6ZQQ6 2873 aa0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 KMT2DO14686 5537 aa0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 NBEAQ8NFP9 2946 aa0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 RIF1Q5UIP0 2472 aaKnown RBP0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 DNAH9Q9NYC9 4486 aa0.08□□□□□ -2.4
SNORA40.19-201ENST00000390846 ACACAQ13085 2346 aa0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 MTORP42345 2549 aa0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 LAMA1P25391 3075 aa0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 SMIM2Q9BVW6 85 aa0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 UTP20O75691 2785 aaKnown RBP0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 CRYBG3Q68DQ2 2970 aa0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 CELSR3Q9NYQ7 3312 aa0.07□□□□□ -2.4
SNORA40.19-201ENST00000390846 FAM186AA6NE01 2351 aa0.06□□□□□ -2.4
SNORA40.19-201ENST00000390846 TRIOO75962 3097 aa0.06□□□□□ -2.4
SNORA40.19-201ENST00000390846 ACACBO00763 2458 aa0.06□□□□□ -2.4
SNORA40.19-201ENST00000390846 H3BUA1 57 aa0.06□□□□□ -2.4
SNORA40.19-201ENST00000390846 FAT3Q8TDW7 4589 aa0.06□□□□□ -2.4
SNORA40.19-201ENST00000390846 MUC5ACP98088 5654 aa0.06□□□□□ -2.4
SNORA40.19-201ENST00000390846 DNAH6Q9C0G6 4158 aa0.05□□□□□ -2.4
SNORA40.19-201ENST00000390846 NDUFA1O15239 70 aa0.05□□□□□ -2.4
SNORA40.19-201ENST00000390846 EPG5Q9HCE0 2579 aa0.05□□□□□ -2.4
SNORA40.19-201ENST00000390846 SAMD9LQ8IVG5 1584 aa0.05□□□□□ -2.4
SNORA40.19-201ENST00000390846 USP9YO00507 2555 aaPredicted RBP0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 CCDC168Q8NDH2 2452 aa0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 DNAH7Q8WXX0 4024 aa0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 SPRR2AP35326 72 aa0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 LAMA5O15230 3695 aa0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 NBEAL1Q6ZS30 2694 aa0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 NBPF19A0A087WUL8 3843 aa0.04□□□□□ -2.4
SNORA40.19-201ENST00000390846 SPTBN5Q9NRC6 3674 aaKnown RBP0.03□□□□□ -2.4
SNORA40.19-201ENST00000390846 SPRR2EP22531 72 aa0.03□□□□□ -2.4
SNORA40.19-201ENST00000390846 DYNC2H1Q8NCM8 4307 aaKnown RBP0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms