RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 KRTAP21-3Q3LHN1 58 aa8.85□□□□□ -0.99
VPS9D1-201ENST00000389386 ALMS1Q8TCU4 4167 aa8.84□□□□□ -0.99
VPS9D1-201ENST00000389386 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
VPS9D1-201ENST00000389386 RTL8CO15255 209 aa8.82□□□□□ -1
VPS9D1-201ENST00000389386 IGHV6-1A0A0B4J1U7 121 aa8.81□□□□□ -1
VPS9D1-201ENST00000389386 A0A1B0GVX0 72 aa8.81□□□□□ -1
VPS9D1-201ENST00000389386 MRPL34Q9BQ48 92 aaKnown RBP8.81□□□□□ -1
VPS9D1-201ENST00000389386 A0A087X002 238 aa8.79□□□□□ -1
VPS9D1-201ENST00000389386 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
VPS9D1-201ENST00000389386 APLNQ9ULZ1 77 aa8.78□□□□□ -1
VPS9D1-201ENST00000389386 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
VPS9D1-201ENST00000389386 ACYP2P14621 99 aa8.77□□□□□ -1.01
VPS9D1-201ENST00000389386 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
VPS9D1-201ENST00000389386 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
VPS9D1-201ENST00000389386 DYNC2H1Q8NCM8 4307 aaKnown RBP8.74□□□□□ -1.01
VPS9D1-201ENST00000389386 Q5W150 140 aa8.74□□□□□ -1.01
VPS9D1-201ENST00000389386 KRTAP13-3Q3SY46 172 aa8.73□□□□□ -1.01
VPS9D1-201ENST00000389386 IGLV9-49A0A0B4J1Y8 123 aa8.72□□□□□ -1.01
VPS9D1-201ENST00000389386 CSAG1Q6PB30 78 aa8.72□□□□□ -1.01
VPS9D1-201ENST00000389386 A0A1B0GU69 56 aa8.71□□□□□ -1.01
VPS9D1-201ENST00000389386 CDK2AP2O75956 126 aa8.71□□□□□ -1.01
VPS9D1-201ENST00000389386 KRTAP13-1Q8IUC0 172 aa8.71□□□□□ -1.02
VPS9D1-201ENST00000389386 NUPR2A6NF83 97 aa8.7□□□□□ -1.02
VPS9D1-201ENST00000389386 KMT2AQ03164 3969 aa8.69□□□□□ -1.02
VPS9D1-201ENST00000389386 DMAC1Q96GE9 116 aa8.68□□□□□ -1.02
VPS9D1-201ENST00000389386 MIR22HGQ0VDD5 57 aa8.67□□□□□ -1.02
VPS9D1-201ENST00000389386 ZNF706Q9Y5V0 76 aaPredicted RBP8.67□□□□□ -1.02
VPS9D1-201ENST00000389386 NBDYA0A0U1RRE5 68 aa8.64□□□□□ -1.03
VPS9D1-201ENST00000389386 UQCR11O14957 56 aa8.64□□□□□ -1.03
VPS9D1-201ENST00000389386 PANO1I0J062 215 aa8.63□□□□□ -1.03
VPS9D1-201ENST00000389386 VPS13DQ5THJ4 4388 aa8.62□□□□□ -1.03
VPS9D1-201ENST00000389386 LINC00483Q53H64 154 aa8.61□□□□□ -1.03
VPS9D1-201ENST00000389386 C1orf134Q5TEV5 83 aa8.6□□□□□ -1.03
VPS9D1-201ENST00000389386 Q6ZRN7 208 aaPredicted RBP8.58□□□□□ -1.04
VPS9D1-201ENST00000389386 LY6G6CO95867 125 aa8.57□□□□□ -1.04
VPS9D1-201ENST00000389386 WWC2-AS2Q96NR7 200 aa8.57□□□□□ -1.04
VPS9D1-201ENST00000389386 C14orf177Q52M58 125 aa8.56□□□□□ -1.04
VPS9D1-201ENST00000389386 DNAH2Q9P225 4427 aa8.54□□□□□ -1.04
VPS9D1-201ENST00000389386 ZNF861PO60384 105 aa8.53□□□□□ -1.04
VPS9D1-201ENST00000389386 HYDINQ4G0P3 5121 aa8.53□□□□□ -1.04
VPS9D1-201ENST00000389386 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.53□□□□□ -1.04
VPS9D1-201ENST00000389386 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.04
VPS9D1-201ENST00000389386 ANAPC11Q9NYG5 84 aa8.51□□□□□ -1.05
VPS9D1-201ENST00000389386 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
VPS9D1-201ENST00000389386 ROMO1P60602 79 aa8.48□□□□□ -1.05
VPS9D1-201ENST00000389386 A0A087WTM6 91 aa8.48□□□□□ -1.05
VPS9D1-201ENST00000389386 IGKV2-30P06310 120 aa8.47□□□□□ -1.05
VPS9D1-201ENST00000389386 FRAS1Q86XX4 4008 aa8.46□□□□□ -1.06
VPS9D1-201ENST00000389386 FAM229AH3BQW9 127 aa8.45□□□□□ -1.06
VPS9D1-201ENST00000389386 IGLV7-43P04211 117 aa8.44□□□□□ -1.06
VPS9D1-201ENST00000389386 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
VPS9D1-201ENST00000389386 DNAH8Q96JB1 4490 aa8.4□□□□□ -1.06
VPS9D1-201ENST00000389386 DNAH6Q9C0G6 4158 aa8.38□□□□□ -1.07
VPS9D1-201ENST00000389386 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
VPS9D1-201ENST00000389386 SACSQ9NZJ4 4579 aa8.36□□□□□ -1.07
VPS9D1-201ENST00000389386 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
VPS9D1-201ENST00000389386 DNAH17Q9UFH2 4485 aa8.36□□□□□ -1.07
VPS9D1-201ENST00000389386 KRTAP25-1Q3LHN0 102 aa8.35□□□□□ -1.07
VPS9D1-201ENST00000389386 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
VPS9D1-201ENST00000389386 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
VPS9D1-201ENST00000389386 A8MUU9 505 aa8.32□□□□□ -1.08
VPS9D1-201ENST00000389386 IGKV2D-30A0A075B6S6 120 aa8.31□□□□□ -1.08
VPS9D1-201ENST00000389386 P0C880 135 aa8.3□□□□□ -1.08
VPS9D1-201ENST00000389386 DNAH11Q96DT5 4516 aa8.29□□□□□ -1.08
VPS9D1-201ENST00000389386 KRTAP10-2P60368 255 aa8.29□□□□□ -1.08
VPS9D1-201ENST00000389386 FAT2Q9NYQ8 4349 aa8.27□□□□□ -1.09
VPS9D1-201ENST00000389386 KRTAP16-1A8MUX0 517 aa8.27□□□□□ -1.09
VPS9D1-201ENST00000389386 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.09
VPS9D1-201ENST00000389386 DNAH5Q8TE73 4624 aa8.26□□□□□ -1.09
VPS9D1-201ENST00000389386 H0YAA0 97 aa8.26□□□□□ -1.09
VPS9D1-201ENST00000389386 Q6ZSA8 131 aa8.25□□□□□ -1.09
VPS9D1-201ENST00000389386 SPINK1P00995 79 aa8.24□□□□□ -1.09
VPS9D1-201ENST00000389386 SSBP3-AS1Q7Z2R9 100 aa8.24□□□□□ -1.09
VPS9D1-201ENST00000389386 PKD1P98161 4303 aa8.23□□□□□ -1.09
VPS9D1-201ENST00000389386 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
VPS9D1-201ENST00000389386 RYR2Q92736 4967 aa8.2□□□□□ -1.1
VPS9D1-201ENST00000389386 A0A0A0MQY5 61 aa8.2□□□□□ -1.1
VPS9D1-201ENST00000389386 Q8N1X5 172 aa8.16□□□□□ -1.1
VPS9D1-201ENST00000389386 LRP1BQ9NZR2 4599 aa8.15□□□□□ -1.1
VPS9D1-201ENST00000389386 KRTAP10-1P60331 282 aa8.15□□□□□ -1.1
VPS9D1-201ENST00000389386 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
VPS9D1-201ENST00000389386 RYR3Q15413 4870 aa8.13□□□□□ -1.11
VPS9D1-201ENST00000389386 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
VPS9D1-201ENST00000389386 A0A1B0GU33 70 aa8.11□□□□□ -1.11
VPS9D1-201ENST00000389386 CRIPTQ9P021 101 aa8.09□□□□□ -1.12
VPS9D1-201ENST00000389386 VPS13BQ7Z7G8 4022 aa8.07□□□□□ -1.12
VPS9D1-201ENST00000389386 KRTAP13-2Q52LG2 175 aa8.07□□□□□ -1.12
VPS9D1-201ENST00000389386 H1FX-AS1Q4G0G2 97 aa8.06□□□□□ -1.12
VPS9D1-201ENST00000389386 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
VPS9D1-201ENST00000389386 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
VPS9D1-201ENST00000389386 NDUFAF8A1L188 74 aa7.98□□□□□ -1.13
VPS9D1-201ENST00000389386 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
VPS9D1-201ENST00000389386 K7ERS5 55 aa7.96□□□□□ -1.14
VPS9D1-201ENST00000389386 FAT1Q14517 4588 aa7.95□□□□□ -1.14
VPS9D1-201ENST00000389386 C20orf166-AS1Q96NR2 134 aa7.94□□□□□ -1.14
VPS9D1-201ENST00000389386 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
VPS9D1-201ENST00000389386 KRTAP3-1Q9BYR8 98 aa7.93□□□□□ -1.14
VPS9D1-201ENST00000389386 KRTAP1-4P0C5Y4 121 aa7.92□□□□□ -1.14
VPS9D1-201ENST00000389386 APOBP04114 4563 aaKnown RBP7.91□□□□□ -1.14
VPS9D1-201ENST00000389386 COX6B2Q6YFQ2 88 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms