RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 Q96NJ1 140 aa13.71□□□□□ -0.21
NPHP3-202ENST00000383282 GTF2H5Q6ZYL4 71 aa13.69□□□□□ -0.22
NPHP3-202ENST00000383282 C14orf132Q9NPU4 83 aa13.66□□□□□ -0.22
NPHP3-202ENST00000383282 PDE6GP18545 87 aa13.65□□□□□ -0.22
NPHP3-202ENST00000383282 LOC110117498A0A087WWA1 95 aa13.63□□□□□ -0.23
NPHP3-202ENST00000383282 Q6ZQT0 140 aa13.62□□□□□ -0.23
NPHP3-202ENST00000383282 C20orf166-AS1Q96NR2 134 aa13.61□□□□□ -0.23
NPHP3-202ENST00000383282 C21orf62-AS1Q17RA5 79 aa13.6□□□□□ -0.23
NPHP3-202ENST00000383282 A8MUU9 505 aa13.55□□□□□ -0.24
NPHP3-202ENST00000383282 SMCPP49901 116 aaPredicted RBP13.55□□□□□ -0.24
NPHP3-202ENST00000383282 PRO0461Q9UI25 63 aa13.55□□□□□ -0.24
NPHP3-202ENST00000383282 A0A1B0GW54 56 aa13.52□□□□□ -0.25
NPHP3-202ENST00000383282 SIGMAR1Q99720 223 aa13.51□□□□□ -0.25
NPHP3-202ENST00000383282 F8W1H4 67 aa13.49□□□□□ -0.25
NPHP3-202ENST00000383282 IGKV4-1P06312 121 aa13.47□□□□□ -0.25
NPHP3-202ENST00000383282 DSCR10P59022 87 aa13.45□□□□□ -0.26
NPHP3-202ENST00000383282 DEFB116Q30KQ4 102 aa13.43□□□□□ -0.26
NPHP3-202ENST00000383282 LINC00472Q9H8W2 130 aa13.43□□□□□ -0.26
NPHP3-202ENST00000383282 KRTAP9-8Q9BYQ0 159 aa13.42□□□□□ -0.26
NPHP3-202ENST00000383282 J3KT08 172 aa13.37□□□□□ -0.27
NPHP3-202ENST00000383282 LINC00313P59037 77 aa13.37□□□□□ -0.27
NPHP3-202ENST00000383282 NREPQ16612 68 aa13.37□□□□□ -0.27
NPHP3-202ENST00000383282 FAM236DA0A1B0GTK5 79 aa13.35□□□□□ -0.27
NPHP3-202ENST00000383282 FAM236CP0DP71 79 aa13.35□□□□□ -0.27
NPHP3-202ENST00000383282 ETDBQ3ZM63 59 aa13.35□□□□□ -0.27
NPHP3-202ENST00000383282 A0A1B0GV90 55 aa13.34□□□□□ -0.27
NPHP3-202ENST00000383282 USH2AO75445 5202 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 IGHV6-1A0A0B4J1U7 121 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 NDUFB1O75438 58 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 RBM12B-AS1Q9P1G2 102 aa13.28□□□□□ -0.28
NPHP3-202ENST00000383282 SSPOA2VEC9 5147 aa13.26□□□□□ -0.29
NPHP3-202ENST00000383282 KRTAP16-1A8MUX0 517 aa13.26□□□□□ -0.29
NPHP3-202ENST00000383282 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.26□□□□□ -0.29
NPHP3-202ENST00000383282 A0A1B0GVX0 72 aa13.25□□□□□ -0.29
NPHP3-202ENST00000383282 KRTAP9-7A8MTY7 169 aa13.22□□□□□ -0.29
NPHP3-202ENST00000383282 C8orf87E5RJ46 101 aa13.21□□□□□ -0.29
NPHP3-202ENST00000383282 Q6ZVQ6 151 aa13.21□□□□□ -0.29
NPHP3-202ENST00000383282 A8MWP4 228 aa13.2□□□□□ -0.3
NPHP3-202ENST00000383282 MT2AP02795 61 aa13.2□□□□□ -0.3
NPHP3-202ENST00000383282 UBL5Q9BZL1 73 aa13.2□□□□□ -0.3
NPHP3-202ENST00000383282 NOTCH2NLQ7Z3S9 236 aa13.19□□□□□ -0.3
NPHP3-202ENST00000383282 BPY2O14599 106 aa13.18□□□□□ -0.3
NPHP3-202ENST00000383282 HRES1P13985 223 aa13.18□□□□□ -0.3
NPHP3-202ENST00000383282 MPLKIPQ8TAP9 179 aa13.17□□□□□ -0.3
NPHP3-202ENST00000383282 LINC00846Q9NV44 126 aa13.17□□□□□ -0.3
NPHP3-202ENST00000383282 IGKV3D-7A0A0C4DH55 119 aa13.13□□□□□ -0.31
NPHP3-202ENST00000383282 MT1FP04733 61 aa13.1□□□□□ -0.31
NPHP3-202ENST00000383282 PRR15Q8IV56 129 aa13.1□□□□□ -0.31
NPHP3-202ENST00000383282 C8orf17Q9NRJ1 99 aa13.09□□□□□ -0.31
NPHP3-202ENST00000383282 KRTAP10-10P60014 251 aa13.08□□□□□ -0.32
NPHP3-202ENST00000383282 K7EQZ3 153 aa13.05□□□□□ -0.32
NPHP3-202ENST00000383282 ACYP1P07311 99 aa13.04□□□□□ -0.32
NPHP3-202ENST00000383282 LCE2BO14633 110 aa13.02□□□□□ -0.33
NPHP3-202ENST00000383282 KRTAP9-3Q9BYQ3 159 aa13.01□□□□□ -0.33
NPHP3-202ENST00000383282 FCGBPQ9Y6R7 5405 aaPredicted RBP12.99□□□□□ -0.33
NPHP3-202ENST00000383282 FAM240AA0A1B0GVK7 77 aa12.99□□□□□ -0.33
NPHP3-202ENST00000383282 KRTAP19-1Q8IUB9 90 aa12.98□□□□□ -0.33
NPHP3-202ENST00000383282 Q8N9L7 120 aa12.98□□□□□ -0.33
NPHP3-202ENST00000383282 ZCCHC13Q8WW36 166 aaKnown RBP12.97□□□□□ -0.33
NPHP3-202ENST00000383282 MMP24-AS1A0A0U1RRL7 71 aa12.96□□□□□ -0.33
NPHP3-202ENST00000383282 hDV103S1A0JD37 113 aa12.93□□□□□ -0.34
NPHP3-202ENST00000383282 SPINK7P58062 85 aa12.92□□□□□ -0.34
NPHP3-202ENST00000383282 TMEM254Q8TBM7 123 aa12.92□□□□□ -0.34
NPHP3-202ENST00000383282 CXCL6P80162 114 aa12.91□□□□□ -0.34
NPHP3-202ENST00000383282 MRPL34Q9BQ48 92 aaKnown RBP12.9□□□□□ -0.34
NPHP3-202ENST00000383282 Q8N9P0 234 aaPredicted RBP12.89□□□□□ -0.35
NPHP3-202ENST00000383282 J3QR89 54 aa12.88□□□□□ -0.35
NPHP3-202ENST00000383282 WFDC13Q8IUB5 93 aa12.88□□□□□ -0.35
NPHP3-202ENST00000383282 CASC2Q6XLA1 102 aa12.86□□□□□ -0.35
NPHP3-202ENST00000383282 NDUFS5O43920 106 aa12.85□□□□□ -0.35
NPHP3-202ENST00000383282 ATP5EP2Q5VTU8 51 aa12.82□□□□□ -0.36
NPHP3-202ENST00000383282 HCG22E2RYF7 251 aa12.81□□□□□ -0.36
NPHP3-202ENST00000383282 LINC00643Q86TS7 51 aa12.75□□□□□ -0.37
NPHP3-202ENST00000383282 MACF1Q9UPN3 7388 aaKnown RBP12.71□□□□□ -0.37
NPHP3-202ENST00000383282 HIST1H4AP62805 103 aaKnown RBP12.7□□□□□ -0.38
NPHP3-202ENST00000383282 KRTAP19-6Q3LI70 58 aa12.66□□□□□ -0.38
NPHP3-202ENST00000383282 SYNE2Q8WXH0 6885 aaKnown RBP12.63□□□□□ -0.39
NPHP3-202ENST00000383282 K7ERU9 68 aa12.62□□□□□ -0.39
NPHP3-202ENST00000383282 TP53AIP1Q9HCN2 124 aa12.54□□□□□ -0.4
NPHP3-202ENST00000383282 Q5W150 140 aa12.53□□□□□ -0.4
NPHP3-202ENST00000383282 A0A087WVE0 104 aa12.51□□□□□ -0.41
NPHP3-202ENST00000383282 H1FX-AS1Q4G0G2 97 aa12.51□□□□□ -0.41
NPHP3-202ENST00000383282 IGKV2D-30A0A075B6S6 120 aa12.48□□□□□ -0.41
NPHP3-202ENST00000383282 IGKV2-30P06310 120 aa12.48□□□□□ -0.41
NPHP3-202ENST00000383282 C7orf65Q6ZTY9 151 aa12.46□□□□□ -0.41
NPHP3-202ENST00000383282 TRAV22A0A0B4J277 110 aa12.34□□□□□ -0.43
NPHP3-202ENST00000383282 UQCRQO14949 82 aa12.33□□□□□ -0.44
NPHP3-202ENST00000383282 MT-ATP8P03928 68 aa12.31□□□□□ -0.44
NPHP3-202ENST00000383282 IMUPQ9GZP8 106 aa12.3□□□□□ -0.44
NPHP3-202ENST00000383282 KRTAP6-3Q3LI67 103 aa12.29□□□□□ -0.44
NPHP3-202ENST00000383282 SCGB1A1P11684 91 aa12.27□□□□□ -0.45
NPHP3-202ENST00000383282 H0Y9P7 68 aa12.24□□□□□ -0.45
NPHP3-202ENST00000383282 ATOX1O00244 68 aa12.23□□□□□ -0.45
NPHP3-202ENST00000383282 LOC101927531A0A1B0GV80 90 aa12.21□□□□□ -0.45
NPHP3-202ENST00000383282 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
NPHP3-202ENST00000383282 C4orf26Q17RF5 130 aa12.17□□□□□ -0.46
NPHP3-202ENST00000383282 MP68P56378 58 aa12.15□□□□□ -0.46
NPHP3-202ENST00000383282 CYP4F30PQ9H0H9 118 aa12.15□□□□□ -0.46
NPHP3-202ENST00000383282 FAM236AA0A1B0GUQ0 79 aa12.12□□□□□ -0.47
NPHP3-202ENST00000383282 FAM236BA0A1B0GV22 79 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms