RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 Q5VV11 94 aa10.26□□□□□ -0.77
SGCB-201ENST00000381431 KRTAP10-2P60368 255 aa10.25□□□□□ -0.77
SGCB-201ENST00000381431 CRIPTQ9P021 101 aa10.23□□□□□ -0.77
SGCB-201ENST00000381431 KRTAP11-1Q8IUC1 163 aa10.23□□□□□ -0.77
SGCB-201ENST00000381431 KRTAP10-1P60331 282 aa10.21□□□□□ -0.77
SGCB-201ENST00000381431 ZCCHC13Q8WW36 166 aaKnown RBP10.21□□□□□ -0.78
SGCB-201ENST00000381431 KRTAP7-1Q8IUC3 87 aa10.2□□□□□ -0.78
SGCB-201ENST00000381431 SPINK7P58062 85 aa10.2□□□□□ -0.78
SGCB-201ENST00000381431 KRTAP29-1A8MX34 341 aaPredicted RBP10.19□□□□□ -0.78
SGCB-201ENST00000381431 A0A1B0GU33 70 aa10.18□□□□□ -0.78
SGCB-201ENST00000381431 RBM12B-AS1Q9P1G2 102 aa10.17□□□□□ -0.78
SGCB-201ENST00000381431 A0A087X002 238 aa10.14□□□□□ -0.79
SGCB-201ENST00000381431 NOTCH2NLQ7Z3S9 236 aa10.14□□□□□ -0.79
SGCB-201ENST00000381431 TENM1Q9UKZ4 2725 aa10.13□□□□□ -0.79
SGCB-201ENST00000381431 PRAC1Q96KF2 57 aa10.12□□□□□ -0.79
SGCB-201ENST00000381431 LINC00483Q53H64 154 aa10.12□□□□□ -0.79
SGCB-201ENST00000381431 PKD1L1Q8TDX9 2849 aa10.12□□□□□ -0.79
SGCB-201ENST00000381431 Q6ZR54 194 aa10.08□□□□□ -0.8
SGCB-201ENST00000381431 Q6ZSA8 131 aa10.08□□□□□ -0.8
SGCB-201ENST00000381431 H3BS24 57 aa10.05□□□□□ -0.8
SGCB-201ENST00000381431 Q6ZRN7 208 aaPredicted RBP10.02□□□□□ -0.81
SGCB-201ENST00000381431 PDZD2O15018 2839 aa10.02□□□□□ -0.81
SGCB-201ENST00000381431 DMAC1Q96GE9 116 aa10□□□□□ -0.81
SGCB-201ENST00000381431 FBN1P35555 2871 aaKnown RBP9.98□□□□□ -0.81
SGCB-201ENST00000381431 CSMD2Q7Z408 3487 aa9.96□□□□□ -0.81
SGCB-201ENST00000381431 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
SGCB-201ENST00000381431 VWFP04275 2813 aa9.9□□□□□ -0.82
SGCB-201ENST00000381431 CSAG1Q6PB30 78 aa9.89□□□□□ -0.83
SGCB-201ENST00000381431 LCE6AA0A183 80 aa9.89□□□□□ -0.83
SGCB-201ENST00000381431 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
SGCB-201ENST00000381431 Q5VSD8 79 aa9.87□□□□□ -0.83
SGCB-201ENST00000381431 ZFHX3Q15911 3703 aa9.87□□□□□ -0.83
SGCB-201ENST00000381431 S4R3F8 94 aa9.85□□□□□ -0.83
SGCB-201ENST00000381431 TGP01266 2768 aa9.84□□□□□ -0.83
SGCB-201ENST00000381431 CAMK2N1Q7Z7J9 78 aa9.83□□□□□ -0.84
SGCB-201ENST00000381431 TENM2Q9NT68 2774 aa9.81□□□□□ -0.84
SGCB-201ENST00000381431 KRTAP13-2Q52LG2 175 aa9.8□□□□□ -0.84
SGCB-201ENST00000381431 A8MU10 97 aa9.79□□□□□ -0.84
SGCB-201ENST00000381431 SPATA8Q6RVD6 105 aa9.76□□□□□ -0.85
SGCB-201ENST00000381431 OTOGQ6ZRI0 2925 aa9.74□□□□□ -0.85
SGCB-201ENST00000381431 ASB16-AS1Q495Z4 193 aa9.73□□□□□ -0.85
SGCB-201ENST00000381431 SRRM2Q9UQ35 2752 aaKnown RBP9.73□□□□□ -0.85
SGCB-201ENST00000381431 R4GN34 69 aa9.72□□□□□ -0.85
SGCB-201ENST00000381431 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
SGCB-201ENST00000381431 H1FX-AS1Q4G0G2 97 aa9.71□□□□□ -0.86
SGCB-201ENST00000381431 M0R2T5 61 aa9.67□□□□□ -0.86
SGCB-201ENST00000381431 LUZP6Q538Z0 58 aa9.62□□□□□ -0.87
SGCB-201ENST00000381431 VPS13CQ709C8 3753 aa9.61□□□□□ -0.87
SGCB-201ENST00000381431 SEC61BP60468 96 aaKnown RBP9.6□□□□□ -0.87
SGCB-201ENST00000381431 ROMO1P60602 79 aa9.57□□□□□ -0.88
SGCB-201ENST00000381431 M0QZ58 72 aa9.57□□□□□ -0.88
SGCB-201ENST00000381431 A6NN06 94 aa9.55□□□□□ -0.88
SGCB-201ENST00000381431 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
SGCB-201ENST00000381431 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
SGCB-201ENST00000381431 NBPF19A0A087WUL8 3843 aa9.49□□□□□ -0.89
SGCB-201ENST00000381431 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
SGCB-201ENST00000381431 FBN3Q75N90 2809 aa9.37□□□□□ -0.91
SGCB-201ENST00000381431 A8MUU9 505 aa9.33□□□□□ -0.92
SGCB-201ENST00000381431 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
SGCB-201ENST00000381431 KRTAP25-1Q3LHN0 102 aa9.28□□□□□ -0.92
SGCB-201ENST00000381431 COL7A1Q02388 2944 aa9.21□□□□□ -0.94
SGCB-201ENST00000381431 KRTAP16-1A8MUX0 517 aa9.15□□□□□ -0.95
SGCB-201ENST00000381431 TRRAPQ9Y4A5 3859 aa9.12□□□□□ -0.95
SGCB-201ENST00000381431 MEGF8Q7Z7M0 2845 aa9.11□□□□□ -0.95
SGCB-201ENST00000381431 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
SGCB-201ENST00000381431 AKAP9Q99996 3911 aa9.09□□□□□ -0.95
SGCB-201ENST00000381431 XP32Q5T750 250 aa9.08□□□□□ -0.96
SGCB-201ENST00000381431 PLAC4Q8WY50 150 aa9.07□□□□□ -0.96
SGCB-201ENST00000381431 A0A0A0MQY5 61 aa9.07□□□□□ -0.96
SGCB-201ENST00000381431 H0YAA0 97 aa9.04□□□□□ -0.96
SGCB-201ENST00000381431 CSMD3Q7Z407 3707 aa9.03□□□□□ -0.96
SGCB-201ENST00000381431 ZNF469Q96JG9 3925 aaPredicted RBP9.01□□□□□ -0.97
SGCB-201ENST00000381431 NDUFAF8A1L188 74 aa8.97□□□□□ -0.97
SGCB-201ENST00000381431 KRTAP13-3Q3SY46 172 aa8.97□□□□□ -0.97
SGCB-201ENST00000381431 C10orf95Q9H7T3 257 aa8.97□□□□□ -0.97
SGCB-201ENST00000381431 P0C880 135 aa8.87□□□□□ -0.99
SGCB-201ENST00000381431 ANK3Q12955 4377 aaKnown RBP8.79□□□□□ -1
SGCB-201ENST00000381431 A0A1B0GVY2 172 aa8.78□□□□□ -1
SGCB-201ENST00000381431 TNP1P09430 55 aa8.78□□□□□ -1
SGCB-201ENST00000381431 TPRXLQ17RH7 258 aa8.76□□□□□ -1.01
SGCB-201ENST00000381431 KRTAP10-8P60410 259 aa8.72□□□□□ -1.01
SGCB-201ENST00000381431 KRTAP3-1Q9BYR8 98 aa8.59□□□□□ -1.03
SGCB-201ENST00000381431 PP632Q6XCG6 107 aa8.51□□□□□ -1.05
SGCB-201ENST00000381431 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
SGCB-201ENST00000381431 KRTAP10-10P60014 251 aa8.44□□□□□ -1.06
SGCB-201ENST00000381431 KRTAP12-1P59990 96 aa8.34□□□□□ -1.07
SGCB-201ENST00000381431 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
SGCB-201ENST00000381431 KRTAP10-6P60371 365 aaPredicted RBP8.29□□□□□ -1.08
SGCB-201ENST00000381431 HUWE1Q7Z6Z7 4374 aaKnown RBP8.19□□□□□ -1.1
SGCB-201ENST00000381431 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
SGCB-201ENST00000381431 DNAH10Q8IVF4 4471 aa8.11□□□□□ -1.11
SGCB-201ENST00000381431 ANK2Q01484 3957 aa8.11□□□□□ -1.11
SGCB-201ENST00000381431 CMYA5Q8N3K9 4069 aa8.11□□□□□ -1.11
SGCB-201ENST00000381431 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
SGCB-201ENST00000381431 KRTAP3-3Q9BYR6 98 aa8.05□□□□□ -1.12
SGCB-201ENST00000381431 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
SGCB-201ENST00000381431 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
SGCB-201ENST00000381431 LYSTQ99698 3801 aa7.97□□□□□ -1.13
SGCB-201ENST00000381431 DNAH3Q8TD57 4116 aa7.93□□□□□ -1.14
SGCB-201ENST00000381431 DNHD1Q96M86 4753 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms