RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 RBM12B-AS1Q9P1G2 102 aa7.21□□□□□ -1.25
GABPB1-203ENST00000380877 FLG2Q5D862 2391 aaPredicted RBP7.21□□□□□ -1.26
GABPB1-203ENST00000380877 CSMD1Q96PZ7 3565 aa7.2□□□□□ -1.26
GABPB1-203ENST00000380877 KRTAP13-1Q8IUC0 172 aa7.19□□□□□ -1.26
GABPB1-203ENST00000380877 Q5W150 140 aa7.18□□□□□ -1.26
GABPB1-203ENST00000380877 ZFHX3Q15911 3703 aa7.18□□□□□ -1.26
GABPB1-203ENST00000380877 Q6ZSA8 131 aa7.18□□□□□ -1.26
GABPB1-203ENST00000380877 TENM2Q9NT68 2774 aa7.16□□□□□ -1.26
GABPB1-203ENST00000380877 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.26
GABPB1-203ENST00000380877 SVEP1Q4LDE5 3571 aa7.14□□□□□ -1.27
GABPB1-203ENST00000380877 SPENQ96T58 3664 aaKnown RBP7.14□□□□□ -1.27
GABPB1-203ENST00000380877 MIR22HGQ0VDD5 57 aa7.14□□□□□ -1.27
GABPB1-203ENST00000380877 TGP01266 2768 aa7.11□□□□□ -1.27
GABPB1-203ENST00000380877 SPINK7P58062 85 aa7.11□□□□□ -1.27
GABPB1-203ENST00000380877 CSMD2Q7Z408 3487 aa7.1□□□□□ -1.27
GABPB1-203ENST00000380877 Q1T7F1 81 aa7.1□□□□□ -1.27
GABPB1-203ENST00000380877 NOTCH2NLQ7Z3S9 236 aa7.09□□□□□ -1.27
GABPB1-203ENST00000380877 KRTAP13-2Q52LG2 175 aa7.08□□□□□ -1.28
GABPB1-203ENST00000380877 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
GABPB1-203ENST00000380877 BSNQ9UPA5 3926 aa7.04□□□□□ -1.28
GABPB1-203ENST00000380877 FP248Q71RG6 208 aaPredicted RBP7.03□□□□□ -1.28
GABPB1-203ENST00000380877 RPS29P62273 56 aaKnown RBP7□□□□□ -1.29
GABPB1-203ENST00000380877 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
GABPB1-203ENST00000380877 LINC01558Q9Y6Z2 57 aa7□□□□□ -1.29
GABPB1-203ENST00000380877 CUBNO60494 3623 aa6.99□□□□□ -1.29
GABPB1-203ENST00000380877 Q5XG85 94 aa6.99□□□□□ -1.29
GABPB1-203ENST00000380877 A0A0D9SG42 100 aa6.98□□□□□ -1.29
GABPB1-203ENST00000380877 LINC01554Q52M75 96 aa6.98□□□□□ -1.29
GABPB1-203ENST00000380877 SEC61BP60468 96 aaKnown RBP6.97□□□□□ -1.29
GABPB1-203ENST00000380877 OXTP01178 125 aa6.97□□□□□ -1.29
GABPB1-203ENST00000380877 DMAC1Q96GE9 116 aa6.96□□□□□ -1.29
GABPB1-203ENST00000380877 Q75L30 129 aa6.96□□□□□ -1.3
GABPB1-203ENST00000380877 A0A1B0GU33 70 aa6.96□□□□□ -1.3
GABPB1-203ENST00000380877 CSAG1Q6PB30 78 aa6.94□□□□□ -1.3
GABPB1-203ENST00000380877 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
GABPB1-203ENST00000380877 S4R3F8 94 aa6.93□□□□□ -1.3
GABPB1-203ENST00000380877 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
GABPB1-203ENST00000380877 Q5VV11 94 aa6.89□□□□□ -1.31
GABPB1-203ENST00000380877 KRTAP1-4P0C5Y4 121 aa6.87□□□□□ -1.31
GABPB1-203ENST00000380877 TRRAPQ9Y4A5 3859 aa6.86□□□□□ -1.31
GABPB1-203ENST00000380877 M0R2T5 61 aa6.85□□□□□ -1.31
GABPB1-203ENST00000380877 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
GABPB1-203ENST00000380877 KTN1-AS1Q86SY8 53 aa6.83□□□□□ -1.32
GABPB1-203ENST00000380877 SRRM2Q9UQ35 2752 aaKnown RBP6.75□□□□□ -1.33
GABPB1-203ENST00000380877 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
GABPB1-203ENST00000380877 R4GN34 69 aa6.74□□□□□ -1.33
GABPB1-203ENST00000380877 CAMK2N1Q7Z7J9 78 aa6.73□□□□□ -1.33
GABPB1-203ENST00000380877 A8MUU9 505 aa6.73□□□□□ -1.33
GABPB1-203ENST00000380877 LCA10Q71F78 164 aa6.72□□□□□ -1.33
GABPB1-203ENST00000380877 C20orf166-AS1Q96NR2 134 aa6.71□□□□□ -1.33
GABPB1-203ENST00000380877 FBN3Q75N90 2809 aa6.71□□□□□ -1.34
GABPB1-203ENST00000380877 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
GABPB1-203ENST00000380877 A0A1B0GVY2 172 aa6.65□□□□□ -1.34
GABPB1-203ENST00000380877 ADM2Q7Z4H4 148 aa6.64□□□□□ -1.35
GABPB1-203ENST00000380877 MEGF8Q7Z7M0 2845 aa6.64□□□□□ -1.35
GABPB1-203ENST00000380877 M0QZ58 72 aa6.63□□□□□ -1.35
GABPB1-203ENST00000380877 SPATA8Q6RVD6 105 aa6.62□□□□□ -1.35
GABPB1-203ENST00000380877 XP32Q5T750 250 aa6.59□□□□□ -1.35
GABPB1-203ENST00000380877 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
GABPB1-203ENST00000380877 VPS13CQ709C8 3753 aa6.58□□□□□ -1.36
GABPB1-203ENST00000380877 KRTAP16-1A8MUX0 517 aa6.58□□□□□ -1.36
GABPB1-203ENST00000380877 ZNF469Q96JG9 3925 aaPredicted RBP6.56□□□□□ -1.36
GABPB1-203ENST00000380877 COL7A1Q02388 2944 aa6.55□□□□□ -1.36
GABPB1-203ENST00000380877 KRTAP10-8P60410 259 aa6.5□□□□□ -1.37
GABPB1-203ENST00000380877 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
GABPB1-203ENST00000380877 ROMO1P60602 79 aa6.48□□□□□ -1.37
GABPB1-203ENST00000380877 A8MU10 97 aa6.47□□□□□ -1.37
GABPB1-203ENST00000380877 KRTAP13-3Q3SY46 172 aa6.46□□□□□ -1.37
GABPB1-203ENST00000380877 AKAP9Q99996 3911 aa6.39□□□□□ -1.39
GABPB1-203ENST00000380877 HUWE1Q7Z6Z7 4374 aaKnown RBP6.38□□□□□ -1.39
GABPB1-203ENST00000380877 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
GABPB1-203ENST00000380877 A6NN06 94 aa6.36□□□□□ -1.39
GABPB1-203ENST00000380877 LUZP6Q538Z0 58 aa6.31□□□□□ -1.4
GABPB1-203ENST00000380877 DNAH9Q9NYC9 4486 aa6.2□□□□□ -1.42
GABPB1-203ENST00000380877 H0YAA0 97 aa6.2□□□□□ -1.42
GABPB1-203ENST00000380877 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
GABPB1-203ENST00000380877 P0C880 135 aa6.17□□□□□ -1.42
GABPB1-203ENST00000380877 DNHD1Q96M86 4753 aa6.15□□□□□ -1.42
GABPB1-203ENST00000380877 KRTAP10-4P60372 401 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-203ENST00000380877 CSMD3Q7Z407 3707 aa6.13□□□□□ -1.43
GABPB1-203ENST00000380877 MT1HL1P0DM35 61 aa6.12□□□□□ -1.43
GABPB1-203ENST00000380877 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.43
GABPB1-203ENST00000380877 TNP1P09430 55 aa6.07□□□□□ -1.44
GABPB1-203ENST00000380877 PLECQ15149 4684 aaKnown RBP6.05□□□□□ -1.44
GABPB1-203ENST00000380877 KRTAP10-10P60014 251 aa6.05□□□□□ -1.44
GABPB1-203ENST00000380877 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
GABPB1-203ENST00000380877 DNAH5Q8TE73 4624 aa5.99□□□□□ -1.45
GABPB1-203ENST00000380877 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.45
GABPB1-203ENST00000380877 ALMS1Q8TCU4 4167 aa5.96□□□□□ -1.45
GABPB1-203ENST00000380877 DNAH1Q9P2D7 4330 aa5.96□□□□□ -1.46
GABPB1-203ENST00000380877 DNAH11Q96DT5 4516 aa5.94□□□□□ -1.46
GABPB1-203ENST00000380877 A0A0A0MQY5 61 aa5.92□□□□□ -1.46
GABPB1-203ENST00000380877 VPS13DQ5THJ4 4388 aa5.91□□□□□ -1.46
GABPB1-203ENST00000380877 H3BS24 57 aa5.91□□□□□ -1.46
GABPB1-203ENST00000380877 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
GABPB1-203ENST00000380877 STARD9Q9P2P6 4700 aa5.88□□□□□ -1.47
GABPB1-203ENST00000380877 PRKDCP78527 4128 aaKnown RBP5.87□□□□□ -1.47
GABPB1-203ENST00000380877 DNAH10Q8IVF4 4471 aa5.86□□□□□ -1.47
GABPB1-203ENST00000380877 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
GABPB1-203ENST00000380877 KRTAP10-6P60371 365 aaPredicted RBP5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms