RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 HSPG2P98160 4391 aa11.19□□□□□ -0.62
GMDS-201ENST00000380805 SPINK6Q6UWN8 80 aa11.18□□□□□ -0.62
GMDS-201ENST00000380805 BIRC6Q9NR09 4857 aa11.17□□□□□ -0.62
GMDS-201ENST00000380805 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
GMDS-201ENST00000380805 ATP5EP56381 51 aaPredicted RBP11.15□□□□□ -0.62
GMDS-201ENST00000380805 KIAA1109Q2LD37 5005 aa11.14□□□□□ -0.63
GMDS-201ENST00000380805 IGHV6-1A0A0B4J1U7 121 aa11.13□□□□□ -0.63
GMDS-201ENST00000380805 H3BPC8 53 aa11.12□□□□□ -0.63
GMDS-201ENST00000380805 MP68P56378 58 aa11.12□□□□□ -0.63
GMDS-201ENST00000380805 RYR1P21817 5038 aa11.11□□□□□ -0.63
GMDS-201ENST00000380805 PLA2G1BP04054 148 aaKnown RBP11.11□□□□□ -0.63
GMDS-201ENST00000380805 TP53AIP1Q9HCN2 124 aa11.1□□□□□ -0.63
GMDS-201ENST00000380805 FAT1Q14517 4588 aa11.09□□□□□ -0.63
GMDS-201ENST00000380805 KRTAP10-4P60372 401 aaPredicted RBP11.09□□□□□ -0.63
GMDS-201ENST00000380805 SMR3BP02814 79 aaPredicted RBP11.08□□□□□ -0.64
GMDS-201ENST00000380805 MRPL34Q9BQ48 92 aaKnown RBP11.08□□□□□ -0.64
GMDS-201ENST00000380805 LIMD2Q9BT23 127 aa11.07□□□□□ -0.64
GMDS-201ENST00000380805 KRTAP17-1Q9BYP8 105 aa11.07□□□□□ -0.64
GMDS-201ENST00000380805 H0Y9P7 68 aa11.06□□□□□ -0.64
GMDS-201ENST00000380805 C1orf195Q5TG92 126 aa11.06□□□□□ -0.64
GMDS-201ENST00000380805 NOTCH2NLQ7Z3S9 236 aa11.06□□□□□ -0.64
GMDS-201ENST00000380805 C8orf87E5RJ46 101 aa11.06□□□□□ -0.64
GMDS-201ENST00000380805 SERP1Q9Y6X1 66 aa11.06□□□□□ -0.64
GMDS-201ENST00000380805 TRAV22A0A0B4J277 110 aa11.05□□□□□ -0.64
GMDS-201ENST00000380805 TYMSOSQ8TAI1 123 aa11.05□□□□□ -0.64
GMDS-201ENST00000380805 OXTP01178 125 aa11.04□□□□□ -0.64
GMDS-201ENST00000380805 SPINK1P00995 79 aa11.02□□□□□ -0.65
GMDS-201ENST00000380805 LINC00208Q96KT6 92 aa11.02□□□□□ -0.65
GMDS-201ENST00000380805 RPS29P62273 56 aaKnown RBP11.01□□□□□ -0.65
GMDS-201ENST00000380805 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
GMDS-201ENST00000380805 PRR26Q8N8Z3 221 aa10.96□□□□□ -0.65
GMDS-201ENST00000380805 C1orf64Q8NEQ6 169 aa10.96□□□□□ -0.65
GMDS-201ENST00000380805 SPAG11AQ6PDA7 123 aa10.95□□□□□ -0.66
GMDS-201ENST00000380805 HERC2O95714 4834 aa10.94□□□□□ -0.66
GMDS-201ENST00000380805 NDUFS5O43920 106 aa10.93□□□□□ -0.66
GMDS-201ENST00000380805 LINC00304Q8N9R0 145 aa10.93□□□□□ -0.66
GMDS-201ENST00000380805 LINC00313P59037 77 aa10.92□□□□□ -0.66
GMDS-201ENST00000380805 Q8N1X5 172 aa10.92□□□□□ -0.66
GMDS-201ENST00000380805 CYP4F30PQ9H0H9 118 aa10.92□□□□□ -0.66
GMDS-201ENST00000380805 SPANXA2-OT1Q8N9U9 137 aa10.92□□□□□ -0.66
GMDS-201ENST00000380805 PKHD1L1Q86WI1 4243 aa10.92□□□□□ -0.66
GMDS-201ENST00000380805 KRTAP13-3Q3SY46 172 aa10.9□□□□□ -0.66
GMDS-201ENST00000380805 Q5VSD8 79 aa10.9□□□□□ -0.66
GMDS-201ENST00000380805 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
GMDS-201ENST00000380805 FAM229AH3BQW9 127 aa10.89□□□□□ -0.67
GMDS-201ENST00000380805 KRTAP4-5Q9BYR2 181 aa10.89□□□□□ -0.67
GMDS-201ENST00000380805 KRTAP16-1A8MUX0 517 aa10.88□□□□□ -0.67
GMDS-201ENST00000380805 Q5W150 140 aa10.83□□□□□ -0.68
GMDS-201ENST00000380805 SMIM26A0A096LP01 95 aa10.81□□□□□ -0.68
GMDS-201ENST00000380805 LOC101927531A0A1B0GV80 90 aa10.81□□□□□ -0.68
GMDS-201ENST00000380805 SVIPQ8NHG7 77 aa10.8□□□□□ -0.68
GMDS-201ENST00000380805 IGLV7-46A0A075B6I9 117 aa10.78□□□□□ -0.68
GMDS-201ENST00000380805 PRR4Q16378 134 aa10.74□□□□□ -0.69
GMDS-201ENST00000380805 FP248Q71RG6 208 aaPredicted RBP10.74□□□□□ -0.69
GMDS-201ENST00000380805 ABCA13Q86UQ4 5058 aa10.72□□□□□ -0.69
GMDS-201ENST00000380805 PCOTHQ58A44 107 aa10.72□□□□□ -0.69
GMDS-201ENST00000380805 FLG2Q5D862 2391 aaPredicted RBP10.68□□□□□ -0.7
GMDS-201ENST00000380805 MYCBP2O75592 4640 aa10.67□□□□□ -0.7
GMDS-201ENST00000380805 LRP1Q07954 4544 aaKnown RBP10.66□□□□□ -0.7
GMDS-201ENST00000380805 IGKV2-30P06310 120 aa10.64□□□□□ -0.71
GMDS-201ENST00000380805 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
GMDS-201ENST00000380805 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
GMDS-201ENST00000380805 C4orf26Q17RF5 130 aa10.61□□□□□ -0.71
GMDS-201ENST00000380805 TNXBP22105 4242 aa10.6□□□□□ -0.71
GMDS-201ENST00000380805 PCLOQ9Y6V0 5065 aa10.56□□□□□ -0.72
GMDS-201ENST00000380805 C20orf166-AS1Q96NR2 134 aa10.55□□□□□ -0.72
GMDS-201ENST00000380805 RETNLBQ9BQ08 111 aa10.55□□□□□ -0.72
GMDS-201ENST00000380805 Q1T7F1 81 aa10.55□□□□□ -0.72
GMDS-201ENST00000380805 COA5Q86WW8 74 aa10.55□□□□□ -0.72
GMDS-201ENST00000380805 A8MUU9 505 aa10.54□□□□□ -0.72
GMDS-201ENST00000380805 HRES1P13985 223 aa10.53□□□□□ -0.72
GMDS-201ENST00000380805 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
GMDS-201ENST00000380805 DMAC1Q96GE9 116 aa10.48□□□□□ -0.73
GMDS-201ENST00000380805 C9orf92A6NGG3 77 aa10.47□□□□□ -0.73
GMDS-201ENST00000380805 IGKV2D-30A0A075B6S6 120 aa10.44□□□□□ -0.74
GMDS-201ENST00000380805 V9GYY9 64 aa10.44□□□□□ -0.74
GMDS-201ENST00000380805 MT1HL1P0DM35 61 aa10.43□□□□□ -0.74
GMDS-201ENST00000380805 C7orf65Q6ZTY9 151 aa10.43□□□□□ -0.74
GMDS-201ENST00000380805 ACYP2P14621 99 aa10.41□□□□□ -0.74
GMDS-201ENST00000380805 Q75L30 129 aa10.4□□□□□ -0.74
GMDS-201ENST00000380805 J3QL48 77 aa10.35□□□□□ -0.75
GMDS-201ENST00000380805 DMBT1Q9UGM3 2413 aaPredicted RBP10.32□□□□□ -0.76
GMDS-201ENST00000380805 LINC01558Q9Y6Z2 57 aa10.27□□□□□ -0.76
GMDS-201ENST00000380805 A8MUN3 132 aa10.26□□□□□ -0.77
GMDS-201ENST00000380805 PSPHP1O15172 72 aa10.25□□□□□ -0.77
GMDS-201ENST00000380805 HERC1Q15751 4861 aa10.24□□□□□ -0.77
GMDS-201ENST00000380805 Q5VV11 94 aa10.23□□□□□ -0.77
GMDS-201ENST00000380805 CHKB-CPT1BH3BT56 60 aa10.21□□□□□ -0.77
GMDS-201ENST00000380805 SPINK7P58062 85 aa10.21□□□□□ -0.78
GMDS-201ENST00000380805 RPL37P61927 97 aaKnown RBP10.21□□□□□ -0.78
GMDS-201ENST00000380805 XP32Q5T750 250 aa10.19□□□□□ -0.78
GMDS-201ENST00000380805 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
GMDS-201ENST00000380805 PRO0628Q9UI54 55 aa10.19□□□□□ -0.78
GMDS-201ENST00000380805 ATP11AUNQ6ZP68 121 aa10.16□□□□□ -0.78
GMDS-201ENST00000380805 BRK1Q8WUW1 75 aa10.1□□□□□ -0.79
GMDS-201ENST00000380805 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
GMDS-201ENST00000380805 TPRXLQ17RH7 258 aa10.07□□□□□ -0.8
GMDS-201ENST00000380805 COX6B2Q6YFQ2 88 aa10.04□□□□□ -0.8
GMDS-201ENST00000380805 SPTSSBQ8NFR3 76 aa9.96□□□□□ -0.81
GMDS-201ENST00000380805 HMCN2Q8NDA2 5059 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms