RNA–Protein interactions for RNA: ENST00000380799.1

SNAPC3-201, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 3 BASIC

Gene SNAPC3, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-201ENST00000380799 DMXL1Q9Y485 3027 aa-0.64□□□□□ -2.51
SNAPC3-201ENST00000380799 PKHD1L1Q86WI1 4243 aa-0.65□□□□□ -2.51
SNAPC3-201ENST00000380799 C6orf48Q9UBA6 75 aa-0.65□□□□□ -2.51
SNAPC3-201ENST00000380799 SPG11Q96JI7 2443 aa-0.65□□□□□ -2.51
SNAPC3-201ENST00000380799 VPS13BQ7Z7G8 4022 aa-0.65□□□□□ -2.51
SNAPC3-201ENST00000380799 ANK3Q12955 4377 aaKnown RBP-0.65□□□□□ -2.51
SNAPC3-201ENST00000380799 BPTFQ12830 3046 aa-0.65□□□□□ -2.51
SNAPC3-201ENST00000380799 ZZEF1O43149 2961 aa-0.66□□□□□ -2.51
SNAPC3-201ENST00000380799 TOGARAM1Q9Y4F4 1720 aa-0.66□□□□□ -2.51
SNAPC3-201ENST00000380799 HIVEP1P15822 2718 aa-0.66□□□□□ -2.52
SNAPC3-201ENST00000380799 LINC01549A6NIU2 74 aa-0.66□□□□□ -2.52
SNAPC3-201ENST00000380799 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.67□□□□□ -2.52
SNAPC3-201ENST00000380799 EFCAB5A4FU69 1503 aa-0.67□□□□□ -2.52
SNAPC3-201ENST00000380799 MT4P47944 62 aa-0.67□□□□□ -2.52
SNAPC3-201ENST00000380799 FCER1GP30273 86 aa-0.68□□□□□ -2.52
SNAPC3-201ENST00000380799 NCBP2-AS2Q69YL0 99 aa-0.68□□□□□ -2.52
SNAPC3-201ENST00000380799 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.68□□□□□ -2.52
SNAPC3-201ENST00000380799 FASNP49327 2511 aaKnown RBP-0.68□□□□□ -2.52
SNAPC3-201ENST00000380799 USP9YO00507 2555 aaPredicted RBP-0.68□□□□□ -2.52
SNAPC3-201ENST00000380799 APOBP04114 4563 aaKnown RBP-0.69□□□□□ -2.52
SNAPC3-201ENST00000380799 DNAH6Q9C0G6 4158 aa-0.69□□□□□ -2.52
SNAPC3-201ENST00000380799 DEFB110Q30KQ9 67 aa-0.7□□□□□ -2.52
SNAPC3-201ENST00000380799 ITPR3Q14573 2671 aa-0.7□□□□□ -2.52
SNAPC3-201ENST00000380799 AKAP9Q99996 3911 aa-0.71□□□□□ -2.52
SNAPC3-201ENST00000380799 SFTA3P0C7M3 94 aa-0.72□□□□□ -2.52
SNAPC3-201ENST00000380799 RYR3Q15413 4870 aa-0.73□□□□□ -2.53
SNAPC3-201ENST00000380799 MYO18BQ8IUG5 2567 aa-0.73□□□□□ -2.53
SNAPC3-201ENST00000380799 CLASP1Q7Z460 1538 aa-0.74□□□□□ -2.53
SNAPC3-201ENST00000380799 USH2AO75445 5202 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 STARD9Q9P2P6 4700 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 SACSQ9NZJ4 4579 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 IGLV5-48A0A075B6I7 105 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 NBPF19A0A087WUL8 3843 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 H3BUA1 57 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 GCN1Q92616 2671 aaKnown RBP-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 CCDC180Q9P1Z9 1646 aa-0.75□□□□□ -2.53
SNAPC3-201ENST00000380799 TEP1Q99973 2627 aaKnown RBP-0.76□□□□□ -2.53
SNAPC3-201ENST00000380799 K7EMI3 77 aa-0.76□□□□□ -2.53
SNAPC3-201ENST00000380799 ABCA6Q8N139 1617 aa-0.76□□□□□ -2.53
SNAPC3-201ENST00000380799 VPS13DQ5THJ4 4388 aa-0.76□□□□□ -2.53
SNAPC3-201ENST00000380799 KIAA1109Q2LD37 5005 aa-0.77□□□□□ -2.53
SNAPC3-201ENST00000380799 ANKRD11Q6UB99 2663 aaPredicted RBP-0.77□□□□□ -2.53
SNAPC3-201ENST00000380799 HYDINQ4G0P3 5121 aa-0.77□□□□□ -2.53
SNAPC3-201ENST00000380799 TACC2O95359 2948 aa-0.78□□□□□ -2.53
SNAPC3-201ENST00000380799 RYR1P21817 5038 aa-0.78□□□□□ -2.53
SNAPC3-201ENST00000380799 CROCC2H7BZ55 1655 aa-0.78□□□□□ -2.53
SNAPC3-201ENST00000380799 KALRNO60229 2985 aa-0.78□□□□□ -2.53
SNAPC3-201ENST00000380799 DNAH3Q8TD57 4116 aa-0.79□□□□□ -2.54
SNAPC3-201ENST00000380799 ACACAQ13085 2346 aa-0.79□□□□□ -2.54
SNAPC3-201ENST00000380799 A0A087WWC5 75 aa-0.79□□□□□ -2.54
SNAPC3-201ENST00000380799 M0R1W7 72 aa-0.79□□□□□ -2.54
SNAPC3-201ENST00000380799 CDC42BPAQ5VT25 1732 aa-0.79□□□□□ -2.54
SNAPC3-201ENST00000380799 TIAM1Q13009 1591 aa-0.79□□□□□ -2.54
SNAPC3-201ENST00000380799 TRIOO75962 3097 aa-0.8□□□□□ -2.54
SNAPC3-201ENST00000380799 LAMA1P25391 3075 aa-0.8□□□□□ -2.54
SNAPC3-201ENST00000380799 CEP290O15078 2479 aa-0.8□□□□□ -2.54
SNAPC3-201ENST00000380799 PKD1L2Q7Z442 2459 aa-0.8□□□□□ -2.54
SNAPC3-201ENST00000380799 EPPK1P58107 5090 aaKnown RBP-0.8□□□□□ -2.54
SNAPC3-201ENST00000380799 LY75O60449 1722 aa-0.81□□□□□ -2.54
SNAPC3-201ENST00000380799 MTORP42345 2549 aa-0.81□□□□□ -2.54
SNAPC3-201ENST00000380799 BIRC6Q9NR09 4857 aa-0.81□□□□□ -2.54
SNAPC3-201ENST00000380799 UBR4Q5T4S7 5183 aa-0.82□□□□□ -2.54
SNAPC3-201ENST00000380799 DNAH11Q96DT5 4516 aa-0.82□□□□□ -2.54
SNAPC3-201ENST00000380799 MMP24-AS1A0A0U1RRL7 71 aa-0.83□□□□□ -2.54
SNAPC3-201ENST00000380799 NOP10Q9NPE3 64 aaKnown RBP-0.83□□□□□ -2.54
SNAPC3-201ENST00000380799 GLI2P10070 1586 aa-0.83□□□□□ -2.54
SNAPC3-201ENST00000380799 SERF2P84101 59 aa-0.85□□□□□ -2.55
SNAPC3-201ENST00000380799 NMES1Q9C002 83 aa-0.85□□□□□ -2.55
SNAPC3-201ENST00000380799 MUC17Q685J3 4493 aa-0.85□□□□□ -2.55
SNAPC3-201ENST00000380799 RANBP2P49792 3224 aaKnown RBP-0.86□□□□□ -2.55
SNAPC3-201ENST00000380799 DNAH2Q9P225 4427 aa-0.88□□□□□ -2.55
SNAPC3-201ENST00000380799 TNP1P09430 55 aa-0.88□□□□□ -2.55
SNAPC3-201ENST00000380799 MGAM2Q2M2H8 2515 aa-0.88□□□□□ -2.55
SNAPC3-201ENST00000380799 LAMA2P24043 3122 aaKnown RBP-0.89□□□□□ -2.55
SNAPC3-201ENST00000380799 EEA1Q15075 1411 aa-0.89□□□□□ -2.55
SNAPC3-201ENST00000380799 FAM186AA6NE01 2351 aa-0.89□□□□□ -2.55
SNAPC3-201ENST00000380799 LRRK2Q5S007 2527 aa-0.9□□□□□ -2.55
SNAPC3-201ENST00000380799 USP9XQ93008 2570 aaPredicted RBP-0.9□□□□□ -2.55
SNAPC3-201ENST00000380799 RIF1Q5UIP0 2472 aaKnown RBP-0.9□□□□□ -2.55
SNAPC3-201ENST00000380799 NBEAQ8NFP9 2946 aa-0.91□□□□□ -2.55
SNAPC3-201ENST00000380799 IGIPA6NJ69 53 aa-0.91□□□□□ -2.56
SNAPC3-201ENST00000380799 S100ZQ8WXG8 99 aa-0.91□□□□□ -2.56
SNAPC3-201ENST00000380799 TMEM167BQ9NRX6 74 aa-0.91□□□□□ -2.56
SNAPC3-201ENST00000380799 ABCA10Q8WWZ4 1543 aa-0.91□□□□□ -2.56
SNAPC3-201ENST00000380799 RYR2Q92736 4967 aa-0.91□□□□□ -2.56
SNAPC3-201ENST00000380799 ALS2Q96Q42 1657 aa-0.91□□□□□ -2.56
SNAPC3-201ENST00000380799 KRTAP19-5Q3LI72 72 aa-0.92□□□□□ -2.56
SNAPC3-201ENST00000380799 NIPBLQ6KC79 2804 aaeCLIP-0.93□□□□□ -2.56
SNAPC3-201ENST00000380799 UTP20O75691 2785 aaKnown RBP-0.93□□□□□ -2.56
SNAPC3-201ENST00000380799 LINC00308Q8TCZ7 52 aa-0.93□□□□□ -2.56
SNAPC3-201ENST00000380799 UGGT1Q9NYU2 1555 aa-0.93□□□□□ -2.56
SNAPC3-201ENST00000380799 NBEAL2Q6ZNJ1 2754 aa-0.94□□□□□ -2.56
SNAPC3-201ENST00000380799 ACACBO00763 2458 aa-0.94□□□□□ -2.56
SNAPC3-201ENST00000380799 RNF213Q63HN8 5207 aa-0.94□□□□□ -2.56
SNAPC3-201ENST00000380799 CCDC168Q8NDH2 2452 aa-0.94□□□□□ -2.56
SNAPC3-201ENST00000380799 CPS1P31327 1500 aa-0.95□□□□□ -2.56
SNAPC3-201ENST00000380799 A0A1B0GUL6 1792 aa-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 TEX15Q9BXT5 2789 aa-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 DNAH1Q9P2D7 4330 aa-0.96□□□□□ -2.56
SNAPC3-201ENST00000380799 SMIM31A0A1B0GVY4 71 aa-0.96□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms