RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
SMN1-202ENST00000380707 ASB16-AS1Q495Z4 193 aa7.1□□□□□ -1.27
SMN1-202ENST00000380707 A0A1B0GV90 55 aa7.08□□□□□ -1.28
SMN1-202ENST00000380707 F8W1H4 67 aa7.08□□□□□ -1.28
SMN1-202ENST00000380707 PDE6GP18545 87 aa7.08□□□□□ -1.28
SMN1-202ENST00000380707 SS18L2Q9UHA2 77 aa7.08□□□□□ -1.28
SMN1-202ENST00000380707 TPRXLQ17RH7 258 aa7.04□□□□□ -1.28
SMN1-202ENST00000380707 Q96NJ1 140 aa7.04□□□□□ -1.28
SMN1-202ENST00000380707 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
SMN1-202ENST00000380707 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
SMN1-202ENST00000380707 A0A1B0GW54 56 aa7.01□□□□□ -1.29
SMN1-202ENST00000380707 C21orf62-AS1Q17RA5 79 aa7.01□□□□□ -1.29
SMN1-202ENST00000380707 LINC00472Q9H8W2 130 aa7.01□□□□□ -1.29
SMN1-202ENST00000380707 DEFB116Q30KQ4 102 aa7□□□□□ -1.29
SMN1-202ENST00000380707 CDIP1Q9H305 208 aa6.98□□□□□ -1.29
SMN1-202ENST00000380707 C9orf92A6NGG3 77 aa6.97□□□□□ -1.29
SMN1-202ENST00000380707 RNF213Q63HN8 5207 aa6.97□□□□□ -1.29
SMN1-202ENST00000380707 IGKV4-1P06312 121 aa6.96□□□□□ -1.29
SMN1-202ENST00000380707 SIGMAR1Q99720 223 aa6.95□□□□□ -1.3
SMN1-202ENST00000380707 NREPQ16612 68 aa6.94□□□□□ -1.3
SMN1-202ENST00000380707 H3BS24 57 aa6.93□□□□□ -1.3
SMN1-202ENST00000380707 MUC17Q685J3 4493 aa6.93□□□□□ -1.3
SMN1-202ENST00000380707 MUC2Q02817 5179 aa6.93□□□□□ -1.3
SMN1-202ENST00000380707 LINC00846Q9NV44 126 aa6.91□□□□□ -1.3
SMN1-202ENST00000380707 J3KT08 172 aa6.9□□□□□ -1.31
SMN1-202ENST00000380707 Q6ZVQ6 151 aa6.88□□□□□ -1.31
SMN1-202ENST00000380707 IGHV6-1A0A0B4J1U7 121 aa6.87□□□□□ -1.31
SMN1-202ENST00000380707 DSCR10P59022 87 aa6.87□□□□□ -1.31
SMN1-202ENST00000380707 A0A1B0GVX0 72 aa6.86□□□□□ -1.31
SMN1-202ENST00000380707 NOTCH2NLQ7Z3S9 236 aa6.86□□□□□ -1.31
SMN1-202ENST00000380707 IGKV3D-7A0A0C4DH55 119 aa6.85□□□□□ -1.31
SMN1-202ENST00000380707 A8MWP4 228 aa6.85□□□□□ -1.31
SMN1-202ENST00000380707 LINC00313P59037 77 aa6.85□□□□□ -1.31
SMN1-202ENST00000380707 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
SMN1-202ENST00000380707 BPY2O14599 106 aa6.84□□□□□ -1.31
SMN1-202ENST00000380707 NDUFB1O75438 58 aa6.83□□□□□ -1.32
SMN1-202ENST00000380707 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
SMN1-202ENST00000380707 PRR15Q8IV56 129 aa6.81□□□□□ -1.32
SMN1-202ENST00000380707 KRTAP16-1A8MUX0 517 aa6.81□□□□□ -1.32
SMN1-202ENST00000380707 K7EQZ3 153 aa6.81□□□□□ -1.32
SMN1-202ENST00000380707 ACYP1P07311 99 aa6.81□□□□□ -1.32
SMN1-202ENST00000380707 RPL37P61927 97 aaKnown RBP6.81□□□□□ -1.32
SMN1-202ENST00000380707 C8orf87E5RJ46 101 aa6.8□□□□□ -1.32
SMN1-202ENST00000380707 SEC61BP60468 96 aaKnown RBP6.8□□□□□ -1.32
SMN1-202ENST00000380707 Q75L30 129 aa6.79□□□□□ -1.32
SMN1-202ENST00000380707 Q8N9L7 120 aa6.79□□□□□ -1.32
SMN1-202ENST00000380707 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
SMN1-202ENST00000380707 C8orf17Q9NRJ1 99 aa6.78□□□□□ -1.32
SMN1-202ENST00000380707 A8MUU9 505 aa6.77□□□□□ -1.33
SMN1-202ENST00000380707 PCOTHQ58A44 107 aa6.76□□□□□ -1.33
SMN1-202ENST00000380707 MMP24-AS1A0A0U1RRL7 71 aa6.75□□□□□ -1.33
SMN1-202ENST00000380707 CXCL6P80162 114 aa6.74□□□□□ -1.33
SMN1-202ENST00000380707 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
SMN1-202ENST00000380707 J3QR89 54 aa6.72□□□□□ -1.33
SMN1-202ENST00000380707 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.33
SMN1-202ENST00000380707 hDV103S1A0JD37 113 aa6.71□□□□□ -1.34
SMN1-202ENST00000380707 Q8N9P0 234 aaPredicted RBP6.7□□□□□ -1.34
SMN1-202ENST00000380707 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
SMN1-202ENST00000380707 WFDC13Q8IUB5 93 aa6.68□□□□□ -1.34
SMN1-202ENST00000380707 ATP5EP2Q5VTU8 51 aa6.67□□□□□ -1.34
SMN1-202ENST00000380707 LINC00643Q86TS7 51 aa6.67□□□□□ -1.34
SMN1-202ENST00000380707 MRPL34Q9BQ48 92 aaKnown RBP6.67□□□□□ -1.34
SMN1-202ENST00000380707 CASC2Q6XLA1 102 aa6.66□□□□□ -1.34
SMN1-202ENST00000380707 HCG22E2RYF7 251 aa6.66□□□□□ -1.34
SMN1-202ENST00000380707 FAT4Q6V0I7 4981 aa6.64□□□□□ -1.35
SMN1-202ENST00000380707 K7ERU9 68 aa6.64□□□□□ -1.35
SMN1-202ENST00000380707 ZCCHC13Q8WW36 166 aaKnown RBP6.62□□□□□ -1.35
SMN1-202ENST00000380707 NDUFS5O43920 106 aa6.61□□□□□ -1.35
SMN1-202ENST00000380707 HIST1H4AP62805 103 aaKnown RBP6.61□□□□□ -1.35
SMN1-202ENST00000380707 A0A087WVE0 104 aa6.57□□□□□ -1.36
SMN1-202ENST00000380707 Q5W150 140 aa6.55□□□□□ -1.36
SMN1-202ENST00000380707 LCE5AQ5TCM9 118 aa6.53□□□□□ -1.36
SMN1-202ENST00000380707 A0A0U1RQV1 116 aa6.51□□□□□ -1.37
SMN1-202ENST00000380707 MT-ATP8P03928 68 aa6.51□□□□□ -1.37
SMN1-202ENST00000380707 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SMN1-202ENST00000380707 SPINK7P58062 85 aa6.5□□□□□ -1.37
SMN1-202ENST00000380707 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
SMN1-202ENST00000380707 FLGP20930 4061 aaPredicted RBP6.49□□□□□ -1.37
SMN1-202ENST00000380707 HRES1P13985 223 aa6.47□□□□□ -1.37
SMN1-202ENST00000380707 IMUPQ9GZP8 106 aa6.46□□□□□ -1.37
SMN1-202ENST00000380707 IGKV2D-30A0A075B6S6 120 aa6.45□□□□□ -1.38
SMN1-202ENST00000380707 IGKV2-30P06310 120 aa6.45□□□□□ -1.38
SMN1-202ENST00000380707 MPLKIPQ8TAP9 179 aa6.44□□□□□ -1.38
SMN1-202ENST00000380707 COX6B2Q6YFQ2 88 aa6.42□□□□□ -1.38
SMN1-202ENST00000380707 C7orf65Q6ZTY9 151 aa6.41□□□□□ -1.38
SMN1-202ENST00000380707 TRAV22A0A0B4J277 110 aa6.4□□□□□ -1.38
SMN1-202ENST00000380707 UQCRQO14949 82 aa6.4□□□□□ -1.38
SMN1-202ENST00000380707 LCE4AQ5TA78 99 aa6.4□□□□□ -1.38
SMN1-202ENST00000380707 OCR1Q9BZK8 76 aa6.4□□□□□ -1.38
SMN1-202ENST00000380707 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
SMN1-202ENST00000380707 SCGB1A1P11684 91 aa6.38□□□□□ -1.39
SMN1-202ENST00000380707 FAM236AA0A1B0GUQ0 79 aa6.36□□□□□ -1.39
SMN1-202ENST00000380707 FAM236BA0A1B0GV22 79 aa6.36□□□□□ -1.39
SMN1-202ENST00000380707 MT1HP80294 61 aa6.36□□□□□ -1.39
SMN1-202ENST00000380707 FAM236DA0A1B0GTK5 79 aa6.35□□□□□ -1.39
SMN1-202ENST00000380707 H0Y9P7 68 aa6.35□□□□□ -1.39
SMN1-202ENST00000380707 FAM236CP0DP71 79 aa6.35□□□□□ -1.39
SMN1-202ENST00000380707 ATOX1O00244 68 aa6.33□□□□□ -1.4
SMN1-202ENST00000380707 CYP4F30PQ9H0H9 118 aa6.33□□□□□ -1.4
SMN1-202ENST00000380707 LOC101927531A0A1B0GV80 90 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms