RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 Q5XG85 94 aa10.57□□□□□ -0.72
UBL3-201ENST00000380680 HRES1P13985 223 aa10.56□□□□□ -0.72
UBL3-201ENST00000380680 UQCR11O14957 56 aa10.55□□□□□ -0.72
UBL3-201ENST00000380680 TGP01266 2768 aa10.55□□□□□ -0.72
UBL3-201ENST00000380680 Q1T7F1 81 aa10.54□□□□□ -0.72
UBL3-201ENST00000380680 KRTAP29-1A8MX34 341 aaPredicted RBP10.54□□□□□ -0.72
UBL3-201ENST00000380680 TENM2Q9NT68 2774 aa10.51□□□□□ -0.73
UBL3-201ENST00000380680 A0A087X002 238 aa10.49□□□□□ -0.73
UBL3-201ENST00000380680 FLG2Q5D862 2391 aaPredicted RBP10.48□□□□□ -0.73
UBL3-201ENST00000380680 Q5W150 140 aa10.46□□□□□ -0.73
UBL3-201ENST00000380680 KRTAP13-1Q8IUC0 172 aa10.45□□□□□ -0.74
UBL3-201ENST00000380680 LCE6AA0A183 80 aa10.45□□□□□ -0.74
UBL3-201ENST00000380680 MIR22HGQ0VDD5 57 aa10.44□□□□□ -0.74
UBL3-201ENST00000380680 J3QL48 77 aa10.44□□□□□ -0.74
UBL3-201ENST00000380680 NOTCH2NLQ7Z3S9 236 aa10.44□□□□□ -0.74
UBL3-201ENST00000380680 ZCCHC13Q8WW36 166 aaKnown RBP10.41□□□□□ -0.74
UBL3-201ENST00000380680 CDC42SE1Q9NRR8 79 aa10.34□□□□□ -0.75
UBL3-201ENST00000380680 TRRAPQ9Y4A5 3859 aa10.34□□□□□ -0.75
UBL3-201ENST00000380680 LINC01558Q9Y6Z2 57 aa10.32□□□□□ -0.76
UBL3-201ENST00000380680 Q75L30 129 aa10.29□□□□□ -0.76
UBL3-201ENST00000380680 Q5VV11 94 aa10.28□□□□□ -0.76
UBL3-201ENST00000380680 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
UBL3-201ENST00000380680 SPINK7P58062 85 aa10.25□□□□□ -0.77
UBL3-201ENST00000380680 VPS13CQ709C8 3753 aa10.23□□□□□ -0.77
UBL3-201ENST00000380680 Q5VSD8 79 aa10.23□□□□□ -0.77
UBL3-201ENST00000380680 ANK3Q12955 4377 aaKnown RBP10.23□□□□□ -0.77
UBL3-201ENST00000380680 ASB16-AS1Q495Z4 193 aa10.2□□□□□ -0.78
UBL3-201ENST00000380680 RBM12B-AS1Q9P1G2 102 aa10.2□□□□□ -0.78
UBL3-201ENST00000380680 COX6B2Q6YFQ2 88 aa10.18□□□□□ -0.78
UBL3-201ENST00000380680 KTN1-AS1Q86SY8 53 aa10.18□□□□□ -0.78
UBL3-201ENST00000380680 DMAC1Q96GE9 116 aa10.18□□□□□ -0.78
UBL3-201ENST00000380680 Q6ZSA8 131 aa10.16□□□□□ -0.78
UBL3-201ENST00000380680 A0A0D9SG42 100 aa10.14□□□□□ -0.79
UBL3-201ENST00000380680 A0A1B0GU33 70 aa10.12□□□□□ -0.79
UBL3-201ENST00000380680 KRTAP21-3Q3LHN1 58 aa10.08□□□□□ -0.8
UBL3-201ENST00000380680 LINC01554Q52M75 96 aa10.03□□□□□ -0.8
UBL3-201ENST00000380680 ZNF469Q96JG9 3925 aaPredicted RBP10.01□□□□□ -0.81
UBL3-201ENST00000380680 FBN3Q75N90 2809 aa10.01□□□□□ -0.81
UBL3-201ENST00000380680 SRRM2Q9UQ35 2752 aaKnown RBP10.01□□□□□ -0.81
UBL3-201ENST00000380680 SPINT4Q6UDR6 99 aa10□□□□□ -0.81
UBL3-201ENST00000380680 RPS29P62273 56 aaKnown RBP9.98□□□□□ -0.81
UBL3-201ENST00000380680 LCA10Q71F78 164 aa9.98□□□□□ -0.81
UBL3-201ENST00000380680 KRTAP1-4P0C5Y4 121 aa9.94□□□□□ -0.82
UBL3-201ENST00000380680 S4R3F8 94 aa9.93□□□□□ -0.82
UBL3-201ENST00000380680 CSAG1Q6PB30 78 aa9.9□□□□□ -0.82
UBL3-201ENST00000380680 CRIPTQ9P021 101 aa9.9□□□□□ -0.82
UBL3-201ENST00000380680 PRAC1Q96KF2 57 aa9.86□□□□□ -0.83
UBL3-201ENST00000380680 MEGF8Q7Z7M0 2845 aa9.85□□□□□ -0.83
UBL3-201ENST00000380680 A8MU10 97 aa9.8□□□□□ -0.84
UBL3-201ENST00000380680 SEC61BP60468 96 aaKnown RBP9.78□□□□□ -0.84
UBL3-201ENST00000380680 H1FX-AS1Q4G0G2 97 aa9.75□□□□□ -0.85
UBL3-201ENST00000380680 COL7A1Q02388 2944 aa9.73□□□□□ -0.85
UBL3-201ENST00000380680 SPATA8Q6RVD6 105 aa9.73□□□□□ -0.85
UBL3-201ENST00000380680 A8MUU9 505 aa9.72□□□□□ -0.85
UBL3-201ENST00000380680 C20orf166-AS1Q96NR2 134 aa9.69□□□□□ -0.86
UBL3-201ENST00000380680 RPL37P61927 97 aaKnown RBP9.66□□□□□ -0.86
UBL3-201ENST00000380680 R4GN34 69 aa9.66□□□□□ -0.86
UBL3-201ENST00000380680 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
UBL3-201ENST00000380680 CAMK2N1Q7Z7J9 78 aa9.61□□□□□ -0.87
UBL3-201ENST00000380680 M0R2T5 61 aa9.58□□□□□ -0.88
UBL3-201ENST00000380680 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
UBL3-201ENST00000380680 AKAP9Q99996 3911 aa9.56□□□□□ -0.88
UBL3-201ENST00000380680 A6NN06 94 aa9.56□□□□□ -0.88
UBL3-201ENST00000380680 M0QZ58 72 aa9.53□□□□□ -0.88
UBL3-201ENST00000380680 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
UBL3-201ENST00000380680 ROMO1P60602 79 aa9.46□□□□□ -0.89
UBL3-201ENST00000380680 XP32Q5T750 250 aa9.46□□□□□ -0.9
UBL3-201ENST00000380680 A0A1B0GVY2 172 aa9.45□□□□□ -0.9
UBL3-201ENST00000380680 CSMD3Q7Z407 3707 aa9.44□□□□□ -0.9
UBL3-201ENST00000380680 HUWE1Q7Z6Z7 4374 aaKnown RBP9.42□□□□□ -0.9
UBL3-201ENST00000380680 KRTAP10-8P60410 259 aa9.3□□□□□ -0.92
UBL3-201ENST00000380680 TPRXLQ17RH7 258 aa9.2□□□□□ -0.94
UBL3-201ENST00000380680 H3BS24 57 aa9.2□□□□□ -0.94
UBL3-201ENST00000380680 H0YAA0 97 aa9.19□□□□□ -0.94
UBL3-201ENST00000380680 KRTAP25-1Q3LHN0 102 aa9.17□□□□□ -0.94
UBL3-201ENST00000380680 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
UBL3-201ENST00000380680 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
UBL3-201ENST00000380680 P0C880 135 aa9.05□□□□□ -0.96
UBL3-201ENST00000380680 PLECQ15149 4684 aaKnown RBP9.03□□□□□ -0.96
UBL3-201ENST00000380680 PLAC4Q8WY50 150 aa9.01□□□□□ -0.97
UBL3-201ENST00000380680 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
UBL3-201ENST00000380680 DNHD1Q96M86 4753 aa8.98□□□□□ -0.97
UBL3-201ENST00000380680 DNAH10Q8IVF4 4471 aa8.92□□□□□ -0.98
UBL3-201ENST00000380680 KRTAP10-4P60372 401 aaPredicted RBP8.87□□□□□ -0.99
UBL3-201ENST00000380680 C10orf95Q9H7T3 257 aa8.87□□□□□ -0.99
UBL3-201ENST00000380680 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
UBL3-201ENST00000380680 DNAH1Q9P2D7 4330 aa8.86□□□□□ -0.99
UBL3-201ENST00000380680 DNAH5Q8TE73 4624 aa8.79□□□□□ -1
UBL3-201ENST00000380680 MT1HL1P0DM35 61 aa8.77□□□□□ -1
UBL3-201ENST00000380680 STARD9Q9P2P6 4700 aa8.77□□□□□ -1.01
UBL3-201ENST00000380680 VPS13DQ5THJ4 4388 aa8.73□□□□□ -1.01
UBL3-201ENST00000380680 TNP1P09430 55 aa8.71□□□□□ -1.01
UBL3-201ENST00000380680 PRKDCP78527 4128 aaKnown RBP8.7□□□□□ -1.02
UBL3-201ENST00000380680 ANK2Q01484 3957 aa8.64□□□□□ -1.03
UBL3-201ENST00000380680 KRTAP12-2P59991 146 aa8.62□□□□□ -1.03
UBL3-201ENST00000380680 KRTAP10-6P60371 365 aaPredicted RBP8.62□□□□□ -1.03
UBL3-201ENST00000380680 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
UBL3-201ENST00000380680 NDUFAF8A1L188 74 aa8.59□□□□□ -1.03
UBL3-201ENST00000380680 KRTAP13-4Q3LI77 160 aa8.58□□□□□ -1.04
UBL3-201ENST00000380680 KRTAP4-5Q9BYR2 181 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms