RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 C8orf87E5RJ46 101 aa11.27□□□□□ -0.61
U2AF1-202ENST00000380276 PSMB2P49721 201 aa11.27□□□□□ -0.61
U2AF1-202ENST00000380276 VPS25Q9BRG1 176 aa11.27□□□□□ -0.61
U2AF1-202ENST00000380276 H3BQ85 93 aa11.26□□□□□ -0.61
U2AF1-202ENST00000380276 FXYD2P54710 66 aa11.26□□□□□ -0.61
U2AF1-202ENST00000380276 A0A1B0GVX0 72 aa11.25□□□□□ -0.61
U2AF1-202ENST00000380276 TMEM256-PLSCR3K7ERE1 68 aa11.25□□□□□ -0.61
U2AF1-202ENST00000380276 S100A1P23297 94 aa11.25□□□□□ -0.61
U2AF1-202ENST00000380276 VAMP8Q9BV40 100 aa11.25□□□□□ -0.61
U2AF1-202ENST00000380276 ZCCHC13Q8WW36 166 aaKnown RBP11.23□□□□□ -0.61
U2AF1-202ENST00000380276 SPINK7P58062 85 aa11.22□□□□□ -0.61
U2AF1-202ENST00000380276 COX6CP09669 75 aa11.17□□□□□ -0.62
U2AF1-202ENST00000380276 K7ERJ3 54 aa11.16□□□□□ -0.62
U2AF1-202ENST00000380276 KRTAP19-6Q3LI70 58 aa11.16□□□□□ -0.62
U2AF1-202ENST00000380276 A8MWP4 228 aa11.15□□□□□ -0.62
U2AF1-202ENST00000380276 UBE2V1Q13404 147 aa11.14□□□□□ -0.63
U2AF1-202ENST00000380276 LYRM7Q5U5X0 104 aa11.13□□□□□ -0.63
U2AF1-202ENST00000380276 WFDC13Q8IUB5 93 aa11.12□□□□□ -0.63
U2AF1-202ENST00000380276 DSCR8Q96T75 97 aa11.11□□□□□ -0.63
U2AF1-202ENST00000380276 RBM3P98179 157 aaKnown RBP11.1□□□□□ -0.63
U2AF1-202ENST00000380276 J3KT08 172 aa11.09□□□□□ -0.63
U2AF1-202ENST00000380276 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
U2AF1-202ENST00000380276 HSD52Q0P140 79 aa11.07□□□□□ -0.64
U2AF1-202ENST00000380276 NDUFB1O75438 58 aa11.06□□□□□ -0.64
U2AF1-202ENST00000380276 SCGB1C2P0DMR2 95 aa11.01□□□□□ -0.65
U2AF1-202ENST00000380276 C9JAW5 83 aa11□□□□□ -0.65
U2AF1-202ENST00000380276 C21orf62-AS1Q17RA5 79 aa11□□□□□ -0.65
U2AF1-202ENST00000380276 C8orf17Q9NRJ1 99 aa10.99□□□□□ -0.65
U2AF1-202ENST00000380276 Q6ZQT0 140 aa10.98□□□□□ -0.65
U2AF1-202ENST00000380276 LOC100996750A0A140TA64 210 aa10.96□□□□□ -0.65
U2AF1-202ENST00000380276 KRTAP4-6Q9BYQ5 205 aa10.96□□□□□ -0.65
U2AF1-202ENST00000380276 BAALC-AS2P0C853 105 aa10.93□□□□□ -0.66
U2AF1-202ENST00000380276 KRTAP6-3Q3LI67 103 aa10.92□□□□□ -0.66
U2AF1-202ENST00000380276 Q6ZVQ6 151 aa10.9□□□□□ -0.66
U2AF1-202ENST00000380276 IGKV3D-7A0A0C4DH55 119 aa10.89□□□□□ -0.67
U2AF1-202ENST00000380276 H1FX-AS1Q4G0G2 97 aa10.87□□□□□ -0.67
U2AF1-202ENST00000380276 TMA7Q9Y2S6 64 aaKnown RBP10.85□□□□□ -0.67
U2AF1-202ENST00000380276 PYY3Q5JQD4 70 aa10.82□□□□□ -0.68
U2AF1-202ENST00000380276 UQCR10Q9UDW1 63 aa10.81□□□□□ -0.68
U2AF1-202ENST00000380276 JMJD7-PLA2G4BH0Y9G9 81 aa10.8□□□□□ -0.68
U2AF1-202ENST00000380276 NDUFS5O43920 106 aa10.79□□□□□ -0.68
U2AF1-202ENST00000380276 PRR15Q8IV56 129 aa10.78□□□□□ -0.68
U2AF1-202ENST00000380276 MRPL34Q9BQ48 92 aaKnown RBP10.78□□□□□ -0.68
U2AF1-202ENST00000380276 A0A1B0GW54 56 aa10.76□□□□□ -0.69
U2AF1-202ENST00000380276 TMEM254Q8TBM7 123 aa10.76□□□□□ -0.69
U2AF1-202ENST00000380276 LOC110117498A0A087WWA1 95 aa10.75□□□□□ -0.69
U2AF1-202ENST00000380276 ATXN8Q156A1 80 aa10.75□□□□□ -0.69
U2AF1-202ENST00000380276 MMP24-AS1A0A0U1RRL7 71 aa10.74□□□□□ -0.69
U2AF1-202ENST00000380276 NREPQ16612 68 aa10.74□□□□□ -0.69
U2AF1-202ENST00000380276 IGKV2D-30A0A075B6S6 120 aa10.73□□□□□ -0.69
U2AF1-202ENST00000380276 IGKV2-30P06310 120 aa10.73□□□□□ -0.69
U2AF1-202ENST00000380276 C14orf132Q9NPU4 83 aa10.73□□□□□ -0.69
U2AF1-202ENST00000380276 PDE6GP18545 87 aa10.71□□□□□ -0.69
U2AF1-202ENST00000380276 hDV103S1A0JD37 113 aa10.69□□□□□ -0.7
U2AF1-202ENST00000380276 NAA38Q9BRA0 125 aaKnown RBP10.69□□□□□ -0.7
U2AF1-202ENST00000380276 C7orf65Q6ZTY9 151 aa10.65□□□□□ -0.7
U2AF1-202ENST00000380276 K7EQZ3 153 aa10.64□□□□□ -0.71
U2AF1-202ENST00000380276 NEBP20929 6669 aa10.6□□□□□ -0.71
U2AF1-202ENST00000380276 FAM236AA0A1B0GUQ0 79 aa10.6□□□□□ -0.71
U2AF1-202ENST00000380276 FAM236BA0A1B0GV22 79 aa10.6□□□□□ -0.71
U2AF1-202ENST00000380276 A6NN06 94 aa10.59□□□□□ -0.71
U2AF1-202ENST00000380276 Q5W150 140 aa10.57□□□□□ -0.72
U2AF1-202ENST00000380276 C4orf26Q17RF5 130 aa10.56□□□□□ -0.72
U2AF1-202ENST00000380276 C5orf47Q569G3 176 aa10.55□□□□□ -0.72
U2AF1-202ENST00000380276 M0R143 59 aa10.53□□□□□ -0.72
U2AF1-202ENST00000380276 BPY2O14599 106 aa10.5□□□□□ -0.73
U2AF1-202ENST00000380276 Q5VV11 94 aa10.49□□□□□ -0.73
U2AF1-202ENST00000380276 HCG22E2RYF7 251 aa10.48□□□□□ -0.73
U2AF1-202ENST00000380276 MUC12Q9UKN1 5478 aa10.48□□□□□ -0.73
U2AF1-202ENST00000380276 MT1BP07438 61 aa10.45□□□□□ -0.74
U2AF1-202ENST00000380276 CASC2Q6XLA1 102 aa10.45□□□□□ -0.74
U2AF1-202ENST00000380276 Q8N9L7 120 aa10.42□□□□□ -0.74
U2AF1-202ENST00000380276 S4R3F8 94 aa10.41□□□□□ -0.74
U2AF1-202ENST00000380276 KRTAP20-1Q3LI63 56 aa10.39□□□□□ -0.75
U2AF1-202ENST00000380276 CXCL6P80162 114 aa10.36□□□□□ -0.75
U2AF1-202ENST00000380276 CSAG1Q6PB30 78 aa10.36□□□□□ -0.75
U2AF1-202ENST00000380276 TSTD3H0UI37 97 aa10.34□□□□□ -0.75
U2AF1-202ENST00000380276 KRTAP19-8Q3LI54 63 aa10.34□□□□□ -0.75
U2AF1-202ENST00000380276 SPRR2GQ9BYE4 73 aa10.33□□□□□ -0.76
U2AF1-202ENST00000380276 H3BT86 120 aa10.32□□□□□ -0.76
U2AF1-202ENST00000380276 KRTAP4-8Q9BYQ9 185 aa10.32□□□□□ -0.76
U2AF1-202ENST00000380276 KRTAP10-5P60370 271 aa10.31□□□□□ -0.76
U2AF1-202ENST00000380276 BATFQ16520 125 aa10.31□□□□□ -0.76
U2AF1-202ENST00000380276 LCA10Q71F78 164 aa10.3□□□□□ -0.76
U2AF1-202ENST00000380276 C1orf64Q8NEQ6 169 aa10.3□□□□□ -0.76
U2AF1-202ENST00000380276 KRTAP3-1Q9BYR8 98 aa10.3□□□□□ -0.76
U2AF1-202ENST00000380276 IMUPQ9GZP8 106 aa10.24□□□□□ -0.77
U2AF1-202ENST00000380276 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
U2AF1-202ENST00000380276 KRTAP5-9P26371 169 aa10.19□□□□□ -0.78
U2AF1-202ENST00000380276 C9orf118A6NHY6 69 aa10.16□□□□□ -0.78
U2AF1-202ENST00000380276 A0A1W2PPM0 123 aa10.15□□□□□ -0.78
U2AF1-202ENST00000380276 KRTAP4-12Q9BQ66 201 aa10.15□□□□□ -0.78
U2AF1-202ENST00000380276 MDN1Q9NU22 5596 aa10.12□□□□□ -0.79
U2AF1-202ENST00000380276 UBL5Q9BZL1 73 aa10.11□□□□□ -0.79
U2AF1-202ENST00000380276 KMT2DO14686 5537 aa10.11□□□□□ -0.79
U2AF1-202ENST00000380276 TAX1BP3O14907 124 aa10.07□□□□□ -0.8
U2AF1-202ENST00000380276 SMIM6P0DI80 62 aa10.05□□□□□ -0.8
U2AF1-202ENST00000380276 KRTAP19-4Q3LI73 84 aa10.05□□□□□ -0.8
U2AF1-202ENST00000380276 TP53AIP1Q9HCN2 124 aa10.02□□□□□ -0.81
U2AF1-202ENST00000380276 CRIPTQ9P021 101 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms