RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 KRTAP10-4P60372 401 aaPredicted RBP4.64□□□□□ -1.67
CDKL5-202ENST00000379996 ASB16-AS1Q495Z4 193 aa4.64□□□□□ -1.67
CDKL5-202ENST00000379996 HRCT1Q6UXD1 115 aa4.64□□□□□ -1.67
CDKL5-202ENST00000379996 HCG22E2RYF7 251 aa4.64□□□□□ -1.67
CDKL5-202ENST00000379996 SMIM26A0A096LP01 95 aa4.63□□□□□ -1.67
CDKL5-202ENST00000379996 Q96NJ1 140 aa4.63□□□□□ -1.67
CDKL5-202ENST00000379996 PSORS1C2Q9UIG4 136 aa4.63□□□□□ -1.67
CDKL5-202ENST00000379996 HSPG2P98160 4391 aa4.62□□□□□ -1.67
CDKL5-202ENST00000379996 EPPK1P58107 5090 aaKnown RBP4.62□□□□□ -1.67
CDKL5-202ENST00000379996 RYR1P21817 5038 aa4.62□□□□□ -1.67
CDKL5-202ENST00000379996 LINC00483Q53H64 154 aa4.62□□□□□ -1.67
CDKL5-202ENST00000379996 hDV103S1A0JD37 113 aa4.62□□□□□ -1.67
CDKL5-202ENST00000379996 IGLV7-43P04211 117 aa4.62□□□□□ -1.67
CDKL5-202ENST00000379996 CYP4F30PQ9H0H9 118 aa4.62□□□□□ -1.67
CDKL5-202ENST00000379996 ZNF861PO60384 105 aa4.61□□□□□ -1.67
CDKL5-202ENST00000379996 SEC61GP60059 68 aa4.6□□□□□ -1.67
CDKL5-202ENST00000379996 A0A087WSZ3 146 aa4.6□□□□□ -1.67
CDKL5-202ENST00000379996 RPL37AP61513 92 aaKnown RBP4.59□□□□□ -1.67
CDKL5-202ENST00000379996 PRR15Q8IV56 129 aa4.59□□□□□ -1.67
CDKL5-202ENST00000379996 A8MWP4 228 aa4.59□□□□□ -1.68
CDKL5-202ENST00000379996 SPINK6Q6UWN8 80 aa4.59□□□□□ -1.68
CDKL5-202ENST00000379996 DEFB116Q30KQ4 102 aa4.58□□□□□ -1.68
CDKL5-202ENST00000379996 BIRC6Q9NR09 4857 aa4.58□□□□□ -1.68
CDKL5-202ENST00000379996 MMP24-AS1A0A0U1RRL7 71 aa4.58□□□□□ -1.68
CDKL5-202ENST00000379996 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
CDKL5-202ENST00000379996 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
CDKL5-202ENST00000379996 UBE2AP49459 152 aa4.58□□□□□ -1.68
CDKL5-202ENST00000379996 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
CDKL5-202ENST00000379996 TRAV22A0A0B4J277 110 aa4.57□□□□□ -1.68
CDKL5-202ENST00000379996 C1orf64Q8NEQ6 169 aa4.57□□□□□ -1.68
CDKL5-202ENST00000379996 Q1T7F1 81 aa4.55□□□□□ -1.68
CDKL5-202ENST00000379996 H3BPC8 53 aa4.54□□□□□ -1.68
CDKL5-202ENST00000379996 SPANXA2-OT1Q8N9U9 137 aa4.54□□□□□ -1.68
CDKL5-202ENST00000379996 Q5VSD8 79 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 MOBPQ13875 183 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 WFDC13Q8IUB5 93 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 KRTAP17-1Q9BYP8 105 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 PRO0628Q9UI54 55 aa4.53□□□□□ -1.68
CDKL5-202ENST00000379996 KRTAP1-4P0C5Y4 121 aa4.52□□□□□ -1.69
CDKL5-202ENST00000379996 CASC2Q6XLA1 102 aa4.52□□□□□ -1.69
CDKL5-202ENST00000379996 HERC2O95714 4834 aa4.52□□□□□ -1.69
CDKL5-202ENST00000379996 SMR3BP02814 79 aaPredicted RBP4.51□□□□□ -1.69
CDKL5-202ENST00000379996 KRTAP19-4Q3LI73 84 aa4.51□□□□□ -1.69
CDKL5-202ENST00000379996 NDUFB1O75438 58 aa4.5□□□□□ -1.69
CDKL5-202ENST00000379996 KRTAP13-3Q3SY46 172 aa4.5□□□□□ -1.69
CDKL5-202ENST00000379996 FAT1Q14517 4588 aa4.5□□□□□ -1.69
CDKL5-202ENST00000379996 H0Y9P7 68 aa4.49□□□□□ -1.69
CDKL5-202ENST00000379996 IGKV2-30P06310 120 aa4.49□□□□□ -1.69
CDKL5-202ENST00000379996 V9GYY9 64 aa4.49□□□□□ -1.69
CDKL5-202ENST00000379996 KIAA1109Q2LD37 5005 aa4.49□□□□□ -1.69
CDKL5-202ENST00000379996 LINC00208Q96KT6 92 aa4.47□□□□□ -1.69
CDKL5-202ENST00000379996 C8orf17Q9NRJ1 99 aa4.47□□□□□ -1.69
CDKL5-202ENST00000379996 IGLV7-46A0A075B6I9 117 aa4.46□□□□□ -1.69
CDKL5-202ENST00000379996 MP68P56378 58 aa4.46□□□□□ -1.69
CDKL5-202ENST00000379996 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.69
CDKL5-202ENST00000379996 A0A087X002 238 aa4.46□□□□□ -1.7
CDKL5-202ENST00000379996 NOTCH2NLQ7Z3S9 236 aa4.46□□□□□ -1.7
CDKL5-202ENST00000379996 A0A1B0GVX0 72 aa4.46□□□□□ -1.7
CDKL5-202ENST00000379996 CD164Q04900 197 aa4.45□□□□□ -1.7
CDKL5-202ENST00000379996 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
CDKL5-202ENST00000379996 RPS29P62273 56 aaKnown RBP4.45□□□□□ -1.7
CDKL5-202ENST00000379996 KRTAP13-2Q52LG2 175 aa4.44□□□□□ -1.7
CDKL5-202ENST00000379996 KRTAP9-4Q9BYQ2 154 aa4.44□□□□□ -1.7
CDKL5-202ENST00000379996 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
CDKL5-202ENST00000379996 TP53AIP1Q9HCN2 124 aa4.44□□□□□ -1.7
CDKL5-202ENST00000379996 TNXBP22105 4242 aa4.44□□□□□ -1.7
CDKL5-202ENST00000379996 Q5VV11 94 aa4.43□□□□□ -1.7
CDKL5-202ENST00000379996 Q8N9P0 234 aaPredicted RBP4.43□□□□□ -1.7
CDKL5-202ENST00000379996 ANAPC11Q9NYG5 84 aa4.43□□□□□ -1.7
CDKL5-202ENST00000379996 PRR4Q16378 134 aa4.43□□□□□ -1.7
CDKL5-202ENST00000379996 SPAG11AQ6PDA7 123 aa4.41□□□□□ -1.7
CDKL5-202ENST00000379996 KRTAP4-5Q9BYR2 181 aa4.4□□□□□ -1.7
CDKL5-202ENST00000379996 C1orf195Q5TG92 126 aa4.4□□□□□ -1.71
CDKL5-202ENST00000379996 MRPL34Q9BQ48 92 aaKnown RBP4.4□□□□□ -1.71
CDKL5-202ENST00000379996 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
CDKL5-202ENST00000379996 LOC101927531A0A1B0GV80 90 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 IGKV2D-30A0A075B6S6 120 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 MT1HL1P0DM35 61 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 Q5W150 140 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 COA5Q86WW8 74 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 TYMSOSQ8TAI1 123 aa4.39□□□□□ -1.71
CDKL5-202ENST00000379996 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 SPINK1P00995 79 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 IGHV6-1A0A0B4J1U7 121 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 A8MUN3 132 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 KRTAP4-6Q9BYQ5 205 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 A8MU10 97 aa4.37□□□□□ -1.71
CDKL5-202ENST00000379996 PSPHP1O15172 72 aa4.36□□□□□ -1.71
CDKL5-202ENST00000379996 HRES1P13985 223 aa4.36□□□□□ -1.71
CDKL5-202ENST00000379996 LINC00304Q8N9R0 145 aa4.36□□□□□ -1.71
CDKL5-202ENST00000379996 ABCA13Q86UQ4 5058 aa4.35□□□□□ -1.71
CDKL5-202ENST00000379996 LIMD2Q9BT23 127 aa4.34□□□□□ -1.71
CDKL5-202ENST00000379996 LINC01558Q9Y6Z2 57 aa4.34□□□□□ -1.72
CDKL5-202ENST00000379996 PCOTHQ58A44 107 aa4.33□□□□□ -1.72
CDKL5-202ENST00000379996 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
CDKL5-202ENST00000379996 LRP1Q07954 4544 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms