RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TGP01266 2768 aa4.88□□□□□ -1.63
PTPRR-203ENST00000378778 APLNQ9ULZ1 77 aa4.88□□□□□ -1.63
PTPRR-203ENST00000378778 NOTCH1P46531 2555 aa4.87□□□□□ -1.63
PTPRR-203ENST00000378778 ANK2Q01484 3957 aa4.86□□□□□ -1.63
PTPRR-203ENST00000378778 ALMS1Q8TCU4 4167 aa4.86□□□□□ -1.63
PTPRR-203ENST00000378778 ZNF861PO60384 105 aa4.86□□□□□ -1.63
PTPRR-203ENST00000378778 A0A1B0GU69 56 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 LINC00313P59037 77 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 TENM2Q9NT68 2774 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 TENM1Q9UKZ4 2725 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 IGLV5-52A0A0A0MRZ9 124 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 NBDYA0A0U1RRE5 68 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 SSBP3-AS1Q7Z2R9 100 aa4.85□□□□□ -1.63
PTPRR-203ENST00000378778 UQCR11O14957 56 aa4.84□□□□□ -1.63
PTPRR-203ENST00000378778 KRTAP24-1Q3LI83 254 aa4.84□□□□□ -1.63
PTPRR-203ENST00000378778 Q6ZRN7 208 aaPredicted RBP4.84□□□□□ -1.63
PTPRR-203ENST00000378778 K7EIL1 84 aa4.83□□□□□ -1.64
PTPRR-203ENST00000378778 MEGF8Q7Z7M0 2845 aa4.83□□□□□ -1.64
PTPRR-203ENST00000378778 RTL8CO15255 209 aa4.83□□□□□ -1.64
PTPRR-203ENST00000378778 Q5W150 140 aa4.83□□□□□ -1.64
PTPRR-203ENST00000378778 TENM3Q9P273 2699 aa4.82□□□□□ -1.64
PTPRR-203ENST00000378778 IGKV2-30P06310 120 aa4.81□□□□□ -1.64
PTPRR-203ENST00000378778 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
PTPRR-203ENST00000378778 MIR22HGQ0VDD5 57 aa4.8□□□□□ -1.64
PTPRR-203ENST00000378778 LINC01554Q52M75 96 aa4.8□□□□□ -1.64
PTPRR-203ENST00000378778 PSORS1C2Q9UIG4 136 aa4.8□□□□□ -1.64
PTPRR-203ENST00000378778 PANO1I0J062 215 aa4.8□□□□□ -1.64
PTPRR-203ENST00000378778 NUPR2A6NF83 97 aa4.79□□□□□ -1.64
PTPRR-203ENST00000378778 RETNLBQ9BQ08 111 aa4.79□□□□□ -1.64
PTPRR-203ENST00000378778 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.79□□□□□ -1.64
PTPRR-203ENST00000378778 CMYA5Q8N3K9 4069 aa4.78□□□□□ -1.64
PTPRR-203ENST00000378778 MGAM2Q2M2H8 2515 aa4.78□□□□□ -1.64
PTPRR-203ENST00000378778 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
PTPRR-203ENST00000378778 SEC61BP60468 96 aaKnown RBP4.77□□□□□ -1.65
PTPRR-203ENST00000378778 A0A087WTM6 91 aa4.76□□□□□ -1.65
PTPRR-203ENST00000378778 IGLV7-43P04211 117 aa4.76□□□□□ -1.65
PTPRR-203ENST00000378778 TRRAPQ9Y4A5 3859 aa4.75□□□□□ -1.65
PTPRR-203ENST00000378778 DYNC2H1Q8NCM8 4307 aaKnown RBP4.75□□□□□ -1.65
PTPRR-203ENST00000378778 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
PTPRR-203ENST00000378778 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
PTPRR-203ENST00000378778 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
PTPRR-203ENST00000378778 RYR3Q15413 4870 aa4.73□□□□□ -1.65
PTPRR-203ENST00000378778 CIRBP-AS1Q8TBR5 109 aa4.72□□□□□ -1.65
PTPRR-203ENST00000378778 PRAC1Q96KF2 57 aa4.72□□□□□ -1.65
PTPRR-203ENST00000378778 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
PTPRR-203ENST00000378778 KRTAP16-1A8MUX0 517 aa4.71□□□□□ -1.66
PTPRR-203ENST00000378778 PRKDCP78527 4128 aaKnown RBP4.71□□□□□ -1.66
PTPRR-203ENST00000378778 ANAPC11Q9NYG5 84 aa4.69□□□□□ -1.66
PTPRR-203ENST00000378778 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
PTPRR-203ENST00000378778 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
PTPRR-203ENST00000378778 LY6G6CO95867 125 aa4.67□□□□□ -1.66
PTPRR-203ENST00000378778 ADM2Q7Z4H4 148 aa4.67□□□□□ -1.66
PTPRR-203ENST00000378778 DNAH10Q8IVF4 4471 aa4.65□□□□□ -1.66
PTPRR-203ENST00000378778 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.67
PTPRR-203ENST00000378778 LYSTQ99698 3801 aa4.64□□□□□ -1.67
PTPRR-203ENST00000378778 CSAG1Q6PB30 78 aa4.63□□□□□ -1.67
PTPRR-203ENST00000378778 DNAH9Q9NYC9 4486 aa4.63□□□□□ -1.67
PTPRR-203ENST00000378778 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
PTPRR-203ENST00000378778 C1orf134Q5TEV5 83 aa4.6□□□□□ -1.67
PTPRR-203ENST00000378778 KRTAP13-2Q52LG2 175 aa4.6□□□□□ -1.67
PTPRR-203ENST00000378778 A8MUU9 505 aa4.59□□□□□ -1.67
PTPRR-203ENST00000378778 SPINK1P00995 79 aa4.59□□□□□ -1.67
PTPRR-203ENST00000378778 EPPK1P58107 5090 aaKnown RBP4.58□□□□□ -1.68
PTPRR-203ENST00000378778 BIRC6Q9NR09 4857 aa4.58□□□□□ -1.68
PTPRR-203ENST00000378778 HECTD4Q9Y4D8 3996 aa4.58□□□□□ -1.68
PTPRR-203ENST00000378778 KRTAP25-1Q3LHN0 102 aa4.57□□□□□ -1.68
PTPRR-203ENST00000378778 DNAH17Q9UFH2 4485 aa4.57□□□□□ -1.68
PTPRR-203ENST00000378778 VPS13DQ5THJ4 4388 aa4.57□□□□□ -1.68
PTPRR-203ENST00000378778 DNAH8Q96JB1 4490 aa4.56□□□□□ -1.68
PTPRR-203ENST00000378778 K7ERS5 55 aa4.55□□□□□ -1.68
PTPRR-203ENST00000378778 Q6ZSA8 131 aa4.55□□□□□ -1.68
PTPRR-203ENST00000378778 A0A1B0GU33 70 aa4.54□□□□□ -1.68
PTPRR-203ENST00000378778 H0YAA0 97 aa4.53□□□□□ -1.68
PTPRR-203ENST00000378778 KRTAP1-4P0C5Y4 121 aa4.53□□□□□ -1.68
PTPRR-203ENST00000378778 H1FX-AS1Q4G0G2 97 aa4.53□□□□□ -1.68
PTPRR-203ENST00000378778 STAB2Q8WWQ8 2551 aa4.52□□□□□ -1.69
PTPRR-203ENST00000378778 DNAH7Q8WXX0 4024 aa4.52□□□□□ -1.69
PTPRR-203ENST00000378778 LINC00304Q8N9R0 145 aa4.52□□□□□ -1.69
PTPRR-203ENST00000378778 TYMSOSQ8TAI1 123 aa4.5□□□□□ -1.69
PTPRR-203ENST00000378778 DNAH6Q9C0G6 4158 aa4.49□□□□□ -1.69
PTPRR-203ENST00000378778 C20orf166-AS1Q96NR2 134 aa4.49□□□□□ -1.69
PTPRR-203ENST00000378778 ROMO1P60602 79 aa4.49□□□□□ -1.69
PTPRR-203ENST00000378778 Q8N1X5 172 aa4.49□□□□□ -1.69
PTPRR-203ENST00000378778 PLECQ15149 4684 aaKnown RBP4.49□□□□□ -1.69
PTPRR-203ENST00000378778 COL7A1Q02388 2944 aa4.47□□□□□ -1.69
PTPRR-203ENST00000378778 FRAS1Q86XX4 4008 aa4.45□□□□□ -1.7
PTPRR-203ENST00000378778 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
PTPRR-203ENST00000378778 RYR2Q92736 4967 aa4.44□□□□□ -1.7
PTPRR-203ENST00000378778 DNAH2Q9P225 4427 aa4.44□□□□□ -1.7
PTPRR-203ENST00000378778 CSMD3Q7Z407 3707 aa4.44□□□□□ -1.7
PTPRR-203ENST00000378778 RYR1P21817 5038 aa4.43□□□□□ -1.7
PTPRR-203ENST00000378778 KRTAP10-2P60368 255 aa4.42□□□□□ -1.7
PTPRR-203ENST00000378778 COX6B2Q6YFQ2 88 aa4.42□□□□□ -1.7
PTPRR-203ENST00000378778 KRTAP10-1P60331 282 aa4.41□□□□□ -1.7
PTPRR-203ENST00000378778 SACSQ9NZJ4 4579 aa4.41□□□□□ -1.7
PTPRR-203ENST00000378778 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
PTPRR-203ENST00000378778 PCLOQ9Y6V0 5065 aa4.41□□□□□ -1.7
PTPRR-203ENST00000378778 DNAH11Q96DT5 4516 aa4.38□□□□□ -1.71
PTPRR-203ENST00000378778 RPL37P61927 97 aaKnown RBP4.37□□□□□ -1.71
PTPRR-203ENST00000378778 STARD9Q9P2P6 4700 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms