RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 ZNF292O60281 2723 aa2.08□□□□□ -2.08
PKHD1L1-201ENST00000378402 PRAC1Q96KF2 57 aa2.08□□□□□ -2.08
PKHD1L1-201ENST00000378402 KRTAP26-1Q6PEX3 210 aa2.07□□□□□ -2.08
PKHD1L1-201ENST00000378402 KRTAP24-1Q3LI83 254 aa2.07□□□□□ -2.08
PKHD1L1-201ENST00000378402 FBN2P35556 2912 aa2.07□□□□□ -2.08
PKHD1L1-201ENST00000378402 COL6A5A8TX70 2615 aa2.07□□□□□ -2.08
PKHD1L1-201ENST00000378402 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
PKHD1L1-201ENST00000378402 INE1O15225 51 aa2.07□□□□□ -2.08
PKHD1L1-201ENST00000378402 AKAP9Q99996 3911 aa2.06□□□□□ -2.08
PKHD1L1-201ENST00000378402 FAM168BA1KXE4 195 aa2.06□□□□□ -2.08
PKHD1L1-201ENST00000378402 SPINK6Q6UWN8 80 aa2.06□□□□□ -2.08
PKHD1L1-201ENST00000378402 SVEP1Q4LDE5 3571 aa2.06□□□□□ -2.08
PKHD1L1-201ENST00000378402 ITPR3Q14573 2671 aa2.05□□□□□ -2.08
PKHD1L1-201ENST00000378402 KRTAP23-1A1A580 65 aa2.05□□□□□ -2.08
PKHD1L1-201ENST00000378402 FLNAP21333 2647 aaKnown RBP2.04□□□□□ -2.08
PKHD1L1-201ENST00000378402 GIG44P09565 113 aaPredicted RBP2.04□□□□□ -2.08
PKHD1L1-201ENST00000378402 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
PKHD1L1-201ENST00000378402 OTOGQ6ZRI0 2925 aa2.04□□□□□ -2.08
PKHD1L1-201ENST00000378402 NIPBLQ6KC79 2804 aaeCLIP2.03□□□□□ -2.08
PKHD1L1-201ENST00000378402 NF1P21359 2839 aa2.03□□□□□ -2.08
PKHD1L1-201ENST00000378402 DNAH2Q9P225 4427 aa2.03□□□□□ -2.08
PKHD1L1-201ENST00000378402 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
PKHD1L1-201ENST00000378402 J3QL48 77 aa2.02□□□□□ -2.09
PKHD1L1-201ENST00000378402 VPS13DQ5THJ4 4388 aa2.02□□□□□ -2.09
PKHD1L1-201ENST00000378402 FBN1P35555 2871 aaKnown RBP2.01□□□□□ -2.09
PKHD1L1-201ENST00000378402 APCP25054 2843 aa2.01□□□□□ -2.09
PKHD1L1-201ENST00000378402 A0A096LNI7 61 aa2.01□□□□□ -2.09
PKHD1L1-201ENST00000378402 ITPR2Q14571 2701 aa2.01□□□□□ -2.09
PKHD1L1-201ENST00000378402 DNAH1Q9P2D7 4330 aa2.01□□□□□ -2.09
PKHD1L1-201ENST00000378402 WWC2-AS2Q96NR7 200 aa2□□□□□ -2.09
PKHD1L1-201ENST00000378402 SPENQ96T58 3664 aaKnown RBP2□□□□□ -2.09
PKHD1L1-201ENST00000378402 ZANQ9Y493 2812 aa2□□□□□ -2.09
PKHD1L1-201ENST00000378402 APLNQ9ULZ1 77 aa2□□□□□ -2.09
PKHD1L1-201ENST00000378402 ITPR1Q14643 2758 aa2□□□□□ -2.09
PKHD1L1-201ENST00000378402 Q96NJ1 140 aa2□□□□□ -2.09
PKHD1L1-201ENST00000378402 DNAH10Q8IVF4 4471 aa2□□□□□ -2.09
PKHD1L1-201ENST00000378402 NBDYA0A0U1RRE5 68 aa1.99□□□□□ -2.09
PKHD1L1-201ENST00000378402 VPS13CQ709C8 3753 aa1.99□□□□□ -2.09
PKHD1L1-201ENST00000378402 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
PKHD1L1-201ENST00000378402 C9orf92A6NGG3 77 aa1.99□□□□□ -2.09
PKHD1L1-201ENST00000378402 P0C880 135 aa1.98□□□□□ -2.09
PKHD1L1-201ENST00000378402 TENM4Q6N022 2769 aa1.98□□□□□ -2.09
PKHD1L1-201ENST00000378402 TEX15Q9BXT5 2789 aa1.98□□□□□ -2.09
PKHD1L1-201ENST00000378402 SPACA4Q8TDM5 124 aa1.97□□□□□ -2.09
PKHD1L1-201ENST00000378402 TYMSOSQ8TAI1 123 aa1.97□□□□□ -2.09
PKHD1L1-201ENST00000378402 NSD1Q96L73 2696 aaPredicted RBP1.97□□□□□ -2.09
PKHD1L1-201ENST00000378402 IGSF10Q6WRI0 2623 aa1.97□□□□□ -2.09
PKHD1L1-201ENST00000378402 K7EIL1 84 aa1.97□□□□□ -2.09
PKHD1L1-201ENST00000378402 DNAH5Q8TE73 4624 aa1.97□□□□□ -2.09
PKHD1L1-201ENST00000378402 DYNC2H1Q8NCM8 4307 aaKnown RBP1.96□□□□□ -2.1
PKHD1L1-201ENST00000378402 FLNCQ14315 2725 aa1.96□□□□□ -2.1
PKHD1L1-201ENST00000378402 HIVEP1P15822 2718 aa1.96□□□□□ -2.1
PKHD1L1-201ENST00000378402 A0A087WTM6 91 aa1.95□□□□□ -2.1
PKHD1L1-201ENST00000378402 ZNF469Q96JG9 3925 aaPredicted RBP1.95□□□□□ -2.1
PKHD1L1-201ENST00000378402 LRP1BQ9NZR2 4599 aa1.95□□□□□ -2.1
PKHD1L1-201ENST00000378402 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
PKHD1L1-201ENST00000378402 PDZD2O15018 2839 aa1.94□□□□□ -2.1
PKHD1L1-201ENST00000378402 Q5VSD8 79 aa1.94□□□□□ -2.1
PKHD1L1-201ENST00000378402 H0YAA0 97 aa1.94□□□□□ -2.1
PKHD1L1-201ENST00000378402 KRTAP13-3Q3SY46 172 aa1.94□□□□□ -2.1
PKHD1L1-201ENST00000378402 DNAH8Q96JB1 4490 aa1.94□□□□□ -2.1
PKHD1L1-201ENST00000378402 Q6ZSA8 131 aa1.93□□□□□ -2.1
PKHD1L1-201ENST00000378402 TRRAPQ9Y4A5 3859 aa1.93□□□□□ -2.1
PKHD1L1-201ENST00000378402 R4GN34 69 aa1.93□□□□□ -2.1
PKHD1L1-201ENST00000378402 TNP1P09430 55 aa1.93□□□□□ -2.1
PKHD1L1-201ENST00000378402 S4R3F8 94 aa1.93□□□□□ -2.1
PKHD1L1-201ENST00000378402 FAT3Q8TDW7 4589 aa1.92□□□□□ -2.1
PKHD1L1-201ENST00000378402 RYR3Q15413 4870 aa1.92□□□□□ -2.1
PKHD1L1-201ENST00000378402 PKD1L1Q8TDX9 2849 aa1.92□□□□□ -2.1
PKHD1L1-201ENST00000378402 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
PKHD1L1-201ENST00000378402 CMYA5Q8N3K9 4069 aa1.91□□□□□ -2.1
PKHD1L1-201ENST00000378402 KRTAP15-1Q3LI76 137 aa1.91□□□□□ -2.1
PKHD1L1-201ENST00000378402 MXRA5Q9NR99 2828 aa1.91□□□□□ -2.1
PKHD1L1-201ENST00000378402 A8MU10 97 aa1.9□□□□□ -2.11
PKHD1L1-201ENST00000378402 SRRM2Q9UQ35 2752 aaKnown RBP1.9□□□□□ -2.11
PKHD1L1-201ENST00000378402 APOBP04114 4563 aaKnown RBP1.89□□□□□ -2.11
PKHD1L1-201ENST00000378402 Q6ZRN7 208 aaPredicted RBP1.89□□□□□ -2.11
PKHD1L1-201ENST00000378402 KRTAP1-3Q8IUG1 177 aa1.89□□□□□ -2.11
PKHD1L1-201ENST00000378402 RYR1P21817 5038 aa1.89□□□□□ -2.11
PKHD1L1-201ENST00000378402 NBEAL2Q6ZNJ1 2754 aa1.89□□□□□ -2.11
PKHD1L1-201ENST00000378402 Q8N1X5 172 aa1.88□□□□□ -2.11
PKHD1L1-201ENST00000378402 MYCBP2O75592 4640 aa1.88□□□□□ -2.11
PKHD1L1-201ENST00000378402 PRKDCP78527 4128 aaKnown RBP1.87□□□□□ -2.11
PKHD1L1-201ENST00000378402 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
PKHD1L1-201ENST00000378402 TENM3Q9P273 2699 aa1.86□□□□□ -2.11
PKHD1L1-201ENST00000378402 KRTAP12-2P59991 146 aa1.86□□□□□ -2.11
PKHD1L1-201ENST00000378402 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
PKHD1L1-201ENST00000378402 KMT2CQ8NEZ4 4911 aaKnown RBP1.85□□□□□ -2.11
PKHD1L1-201ENST00000378402 KRTAP10-3P60369 221 aa1.85□□□□□ -2.11
PKHD1L1-201ENST00000378402 A0A0D9SG42 100 aa1.85□□□□□ -2.11
PKHD1L1-201ENST00000378402 KIAA1109Q2LD37 5005 aa1.83□□□□□ -2.12
PKHD1L1-201ENST00000378402 KRTAP1-1Q07627 177 aa1.83□□□□□ -2.12
PKHD1L1-201ENST00000378402 XP32Q5T750 250 aa1.83□□□□□ -2.12
PKHD1L1-201ENST00000378402 FAT2Q9NYQ8 4349 aa1.83□□□□□ -2.12
PKHD1L1-201ENST00000378402 KRTAP19-4Q3LI73 84 aa1.83□□□□□ -2.12
PKHD1L1-201ENST00000378402 HRNRQ86YZ3 2850 aaPredicted RBP1.82□□□□□ -2.12
PKHD1L1-201ENST00000378402 EPPK1P58107 5090 aaKnown RBP1.82□□□□□ -2.12
PKHD1L1-201ENST00000378402 HSPG2P98160 4391 aa1.81□□□□□ -2.12
PKHD1L1-201ENST00000378402 TENM1Q9UKZ4 2725 aa1.81□□□□□ -2.12
PKHD1L1-201ENST00000378402 KRTAP13-4Q3LI77 160 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms