RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 DNAH17Q9UFH2 4485 aa4.82□□□□□ -1.64
CKAP2-203ENST00000378037 FAT1Q14517 4588 aa4.82□□□□□ -1.64
CKAP2-203ENST00000378037 TRAV22A0A0B4J277 110 aa4.81□□□□□ -1.64
CKAP2-203ENST00000378037 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
CKAP2-203ENST00000378037 H7BZZ5 65 aa4.8□□□□□ -1.64
CKAP2-203ENST00000378037 SPAG11AQ6PDA7 123 aa4.8□□□□□ -1.64
CKAP2-203ENST00000378037 LCE6AA0A183 80 aa4.79□□□□□ -1.64
CKAP2-203ENST00000378037 Q8N1X5 172 aa4.79□□□□□ -1.64
CKAP2-203ENST00000378037 A0A1B0GVX0 72 aa4.79□□□□□ -1.64
CKAP2-203ENST00000378037 FAT2Q9NYQ8 4349 aa4.78□□□□□ -1.64
CKAP2-203ENST00000378037 FRAS1Q86XX4 4008 aa4.78□□□□□ -1.64
CKAP2-203ENST00000378037 SERP1Q9Y6X1 66 aa4.78□□□□□ -1.64
CKAP2-203ENST00000378037 MRPL34Q9BQ48 92 aaKnown RBP4.78□□□□□ -1.64
CKAP2-203ENST00000378037 A8MU10 97 aa4.77□□□□□ -1.65
CKAP2-203ENST00000378037 OCR1Q9BZK8 76 aa4.77□□□□□ -1.65
CKAP2-203ENST00000378037 CD164Q04900 197 aa4.76□□□□□ -1.65
CKAP2-203ENST00000378037 Q8N9P0 234 aaPredicted RBP4.76□□□□□ -1.65
CKAP2-203ENST00000378037 SMIM26A0A096LP01 95 aa4.76□□□□□ -1.65
CKAP2-203ENST00000378037 PRR15LQ9BU68 103 aa4.76□□□□□ -1.65
CKAP2-203ENST00000378037 LINC00472Q9H8W2 130 aa4.75□□□□□ -1.65
CKAP2-203ENST00000378037 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 VPS13DQ5THJ4 4388 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 LIMD2Q9BT23 127 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 MYCBP2O75592 4640 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 H3BS24 57 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 Q5VSD8 79 aa4.74□□□□□ -1.65
CKAP2-203ENST00000378037 MMP24-AS1A0A0U1RRL7 71 aa4.73□□□□□ -1.65
CKAP2-203ENST00000378037 C7orf65Q6ZTY9 151 aa4.73□□□□□ -1.65
CKAP2-203ENST00000378037 RBM12B-AS1Q9P1G2 102 aa4.73□□□□□ -1.65
CKAP2-203ENST00000378037 PKHD1L1Q86WI1 4243 aa4.72□□□□□ -1.65
CKAP2-203ENST00000378037 SSBP3-AS1Q7Z2R9 100 aa4.72□□□□□ -1.65
CKAP2-203ENST00000378037 A6NED7 52 aa4.72□□□□□ -1.65
CKAP2-203ENST00000378037 HYDINQ4G0P3 5121 aa4.71□□□□□ -1.66
CKAP2-203ENST00000378037 NDUFC1O43677 76 aa4.71□□□□□ -1.66
CKAP2-203ENST00000378037 J3QL48 77 aa4.71□□□□□ -1.66
CKAP2-203ENST00000378037 DNAH5Q8TE73 4624 aa4.7□□□□□ -1.66
CKAP2-203ENST00000378037 A8MUN3 132 aa4.7□□□□□ -1.66
CKAP2-203ENST00000378037 KLKP1Q107X0 134 aa4.7□□□□□ -1.66
CKAP2-203ENST00000378037 Q5W150 140 aa4.7□□□□□ -1.66
CKAP2-203ENST00000378037 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
CKAP2-203ENST00000378037 KMT2CQ8NEZ4 4911 aaKnown RBP4.69□□□□□ -1.66
CKAP2-203ENST00000378037 FAT3Q8TDW7 4589 aa4.69□□□□□ -1.66
CKAP2-203ENST00000378037 KIAA1109Q2LD37 5005 aa4.68□□□□□ -1.66
CKAP2-203ENST00000378037 LRP1BQ9NZR2 4599 aa4.68□□□□□ -1.66
CKAP2-203ENST00000378037 SPRR1BP22528 89 aa4.68□□□□□ -1.66
CKAP2-203ENST00000378037 HECTD4Q9Y4D8 3996 aa4.68□□□□□ -1.66
CKAP2-203ENST00000378037 DNAH2Q9P225 4427 aa4.67□□□□□ -1.66
CKAP2-203ENST00000378037 COA5Q86WW8 74 aa4.66□□□□□ -1.66
CKAP2-203ENST00000378037 RYR2Q92736 4967 aa4.66□□□□□ -1.66
CKAP2-203ENST00000378037 PKHD1P08F94 4074 aa4.66□□□□□ -1.66
CKAP2-203ENST00000378037 A0A1B0GW54 56 aa4.64□□□□□ -1.67
CKAP2-203ENST00000378037 SACSQ9NZJ4 4579 aa4.63□□□□□ -1.67
CKAP2-203ENST00000378037 TP53AIP1Q9HCN2 124 aa4.63□□□□□ -1.67
CKAP2-203ENST00000378037 C8orf87E5RJ46 101 aa4.62□□□□□ -1.67
CKAP2-203ENST00000378037 HRES1P13985 223 aa4.62□□□□□ -1.67
CKAP2-203ENST00000378037 ATP11AUNQ6ZP68 121 aa4.62□□□□□ -1.67
CKAP2-203ENST00000378037 LINC00483Q53H64 154 aa4.61□□□□□ -1.67
CKAP2-203ENST00000378037 IGLV7-46A0A075B6I9 117 aa4.61□□□□□ -1.67
CKAP2-203ENST00000378037 KRTAP29-1A8MX34 341 aaPredicted RBP4.6□□□□□ -1.67
CKAP2-203ENST00000378037 KRTAP1-4P0C5Y4 121 aa4.6□□□□□ -1.67
CKAP2-203ENST00000378037 VPS13BQ7Z7G8 4022 aa4.6□□□□□ -1.67
CKAP2-203ENST00000378037 PKD1P98161 4303 aa4.59□□□□□ -1.67
CKAP2-203ENST00000378037 LRP1Q07954 4544 aaKnown RBP4.58□□□□□ -1.68
CKAP2-203ENST00000378037 RYR1P21817 5038 aa4.58□□□□□ -1.68
CKAP2-203ENST00000378037 KTN1-AS1Q86SY8 53 aa4.58□□□□□ -1.68
CKAP2-203ENST00000378037 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
CKAP2-203ENST00000378037 Q6ZSA8 131 aa4.57□□□□□ -1.68
CKAP2-203ENST00000378037 LOC101927531A0A1B0GV80 90 aa4.57□□□□□ -1.68
CKAP2-203ENST00000378037 ATP5EP56381 51 aaPredicted RBP4.57□□□□□ -1.68
CKAP2-203ENST00000378037 ACYP2P14621 99 aa4.55□□□□□ -1.68
CKAP2-203ENST00000378037 CYP4F30PQ9H0H9 118 aa4.55□□□□□ -1.68
CKAP2-203ENST00000378037 RYR3Q15413 4870 aa4.55□□□□□ -1.68
CKAP2-203ENST00000378037 A0A1B0GU69 56 aa4.55□□□□□ -1.68
CKAP2-203ENST00000378037 SPINK7P58062 85 aa4.54□□□□□ -1.68
CKAP2-203ENST00000378037 A0A0D9SG42 100 aa4.53□□□□□ -1.68
CKAP2-203ENST00000378037 LINC01554Q52M75 96 aa4.53□□□□□ -1.68
CKAP2-203ENST00000378037 Q1T7F1 81 aa4.51□□□□□ -1.69
CKAP2-203ENST00000378037 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
CKAP2-203ENST00000378037 A0A1B0GVY2 172 aa4.5□□□□□ -1.69
CKAP2-203ENST00000378037 ZCCHC13Q8WW36 166 aaKnown RBP4.5□□□□□ -1.69
CKAP2-203ENST00000378037 APOBP04114 4563 aaKnown RBP4.49□□□□□ -1.69
CKAP2-203ENST00000378037 A6NN06 94 aa4.49□□□□□ -1.69
CKAP2-203ENST00000378037 Q5VV11 94 aa4.48□□□□□ -1.69
CKAP2-203ENST00000378037 LCA10Q71F78 164 aa4.48□□□□□ -1.69
CKAP2-203ENST00000378037 H3BPC8 53 aa4.47□□□□□ -1.69
CKAP2-203ENST00000378037 KRTAP4-5Q9BYR2 181 aa4.46□□□□□ -1.7
CKAP2-203ENST00000378037 PRAC1Q96KF2 57 aa4.45□□□□□ -1.7
CKAP2-203ENST00000378037 CRIPTQ9P021 101 aa4.44□□□□□ -1.7
CKAP2-203ENST00000378037 ADM2Q7Z4H4 148 aa4.42□□□□□ -1.7
CKAP2-203ENST00000378037 BIRC6Q9NR09 4857 aa4.42□□□□□ -1.7
CKAP2-203ENST00000378037 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
CKAP2-203ENST00000378037 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
CKAP2-203ENST00000378037 SPATA8Q6RVD6 105 aa4.39□□□□□ -1.71
CKAP2-203ENST00000378037 HERC2O95714 4834 aa4.38□□□□□ -1.71
CKAP2-203ENST00000378037 KRTAP16-1A8MUX0 517 aa4.37□□□□□ -1.71
CKAP2-203ENST00000378037 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
CKAP2-203ENST00000378037 LRP2P98164 4655 aa4.36□□□□□ -1.71
CKAP2-203ENST00000378037 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
CKAP2-203ENST00000378037 M0R2T5 61 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms