RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 SPACA4Q8TDM5 124 aa9.42□□□□□ -0.9
SSH3-203ENST00000376757 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
SSH3-203ENST00000376757 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
SSH3-203ENST00000376757 PRR26Q8N8Z3 221 aa9.4□□□□□ -0.9
SSH3-203ENST00000376757 HRES1P13985 223 aa9.4□□□□□ -0.9
SSH3-203ENST00000376757 CIRBP-AS1Q8TBR5 109 aa9.39□□□□□ -0.91
SSH3-203ENST00000376757 Q5W150 140 aa9.39□□□□□ -0.91
SSH3-203ENST00000376757 MRPL34Q9BQ48 92 aaKnown RBP9.38□□□□□ -0.91
SSH3-203ENST00000376757 VPS13DQ5THJ4 4388 aa9.38□□□□□ -0.91
SSH3-203ENST00000376757 DYNC2H1Q8NCM8 4307 aaKnown RBP9.37□□□□□ -0.91
SSH3-203ENST00000376757 SPINK7P58062 85 aa9.37□□□□□ -0.91
SSH3-203ENST00000376757 TP53AIP1Q9HCN2 124 aa9.35□□□□□ -0.91
SSH3-203ENST00000376757 A0A087WTM6 91 aa9.35□□□□□ -0.91
SSH3-203ENST00000376757 RTL8CO15255 209 aa9.35□□□□□ -0.91
SSH3-203ENST00000376757 Q75L30 129 aa9.34□□□□□ -0.91
SSH3-203ENST00000376757 LOC101927531A0A1B0GV80 90 aa9.34□□□□□ -0.91
SSH3-203ENST00000376757 ASB16-AS1Q495Z4 193 aa9.34□□□□□ -0.91
SSH3-203ENST00000376757 Q6ZR54 194 aa9.33□□□□□ -0.92
SSH3-203ENST00000376757 IGLV5-52A0A0A0MRZ9 124 aa9.33□□□□□ -0.92
SSH3-203ENST00000376757 LINC00483Q53H64 154 aa9.3□□□□□ -0.92
SSH3-203ENST00000376757 DNAH11Q96DT5 4516 aa9.3□□□□□ -0.92
SSH3-203ENST00000376757 ZNF861PO60384 105 aa9.29□□□□□ -0.92
SSH3-203ENST00000376757 ZNF706Q9Y5V0 76 aaPredicted RBP9.26□□□□□ -0.93
SSH3-203ENST00000376757 LINC01558Q9Y6Z2 57 aa9.26□□□□□ -0.93
SSH3-203ENST00000376757 ALMS1Q8TCU4 4167 aa9.25□□□□□ -0.93
SSH3-203ENST00000376757 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
SSH3-203ENST00000376757 CDC42SE1Q9NRR8 79 aa9.24□□□□□ -0.93
SSH3-203ENST00000376757 NUPR2A6NF83 97 aa9.23□□□□□ -0.93
SSH3-203ENST00000376757 KTN1-AS1Q86SY8 53 aa9.22□□□□□ -0.93
SSH3-203ENST00000376757 A6NN06 94 aa9.2□□□□□ -0.94
SSH3-203ENST00000376757 PLAC8Q9NZF1 115 aa9.18□□□□□ -0.94
SSH3-203ENST00000376757 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
SSH3-203ENST00000376757 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
SSH3-203ENST00000376757 IGLV7-43P04211 117 aa9.17□□□□□ -0.94
SSH3-203ENST00000376757 DNAH5Q8TE73 4624 aa9.16□□□□□ -0.94
SSH3-203ENST00000376757 DNHD1Q96M86 4753 aa9.14□□□□□ -0.95
SSH3-203ENST00000376757 KRTAP13-3Q3SY46 172 aa9.14□□□□□ -0.95
SSH3-203ENST00000376757 LY6G6CO95867 125 aa9.12□□□□□ -0.95
SSH3-203ENST00000376757 PRAC1Q96KF2 57 aa9.11□□□□□ -0.95
SSH3-203ENST00000376757 LINC00313P59037 77 aa9.11□□□□□ -0.95
SSH3-203ENST00000376757 IGKV2D-30A0A075B6S6 120 aa9.1□□□□□ -0.95
SSH3-203ENST00000376757 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
SSH3-203ENST00000376757 ACYP2P14621 99 aa9.1□□□□□ -0.95
SSH3-203ENST00000376757 KRTAP10-2P60368 255 aa9.09□□□□□ -0.95
SSH3-203ENST00000376757 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
SSH3-203ENST00000376757 C1orf134Q5TEV5 83 aa9.08□□□□□ -0.96
SSH3-203ENST00000376757 VPS13BQ7Z7G8 4022 aa9.06□□□□□ -0.96
SSH3-203ENST00000376757 FAT2Q9NYQ8 4349 aa9.05□□□□□ -0.96
SSH3-203ENST00000376757 KRTAP13-2Q52LG2 175 aa9.04□□□□□ -0.96
SSH3-203ENST00000376757 HYDINQ4G0P3 5121 aa9.04□□□□□ -0.96
SSH3-203ENST00000376757 C7orf65Q6ZTY9 151 aa9.04□□□□□ -0.96
SSH3-203ENST00000376757 A0A1B0GU69 56 aa9.03□□□□□ -0.96
SSH3-203ENST00000376757 SPINK1P00995 79 aa9.03□□□□□ -0.96
SSH3-203ENST00000376757 DMAC1Q96GE9 116 aa9□□□□□ -0.97
SSH3-203ENST00000376757 FAM229AH3BQW9 127 aa8.98□□□□□ -0.97
SSH3-203ENST00000376757 SSBP3-AS1Q7Z2R9 100 aa8.97□□□□□ -0.97
SSH3-203ENST00000376757 C8orf87E5RJ46 101 aa8.97□□□□□ -0.97
SSH3-203ENST00000376757 Q8N1X5 172 aa8.94□□□□□ -0.98
SSH3-203ENST00000376757 PKHD1P08F94 4074 aa8.93□□□□□ -0.98
SSH3-203ENST00000376757 KRTAP10-1P60331 282 aa8.93□□□□□ -0.98
SSH3-203ENST00000376757 KRTAP16-1A8MUX0 517 aa8.9□□□□□ -0.98
SSH3-203ENST00000376757 PKD1P98161 4303 aa8.89□□□□□ -0.99
SSH3-203ENST00000376757 MIR22HGQ0VDD5 57 aa8.88□□□□□ -0.99
SSH3-203ENST00000376757 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
SSH3-203ENST00000376757 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
SSH3-203ENST00000376757 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
SSH3-203ENST00000376757 UQCR11O14957 56 aa8.82□□□□□ -1
SSH3-203ENST00000376757 C4orf48Q5BLP8 95 aa8.82□□□□□ -1
SSH3-203ENST00000376757 TYMSOSQ8TAI1 123 aa8.8□□□□□ -1
SSH3-203ENST00000376757 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
SSH3-203ENST00000376757 FAT1Q14517 4588 aa8.79□□□□□ -1
SSH3-203ENST00000376757 C9orf92A6NGG3 77 aa8.78□□□□□ -1
SSH3-203ENST00000376757 SMR3BP02814 79 aaPredicted RBP8.75□□□□□ -1.01
SSH3-203ENST00000376757 DMBT1Q9UGM3 2413 aaPredicted RBP8.74□□□□□ -1.01
SSH3-203ENST00000376757 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
SSH3-203ENST00000376757 Q6ZSA8 131 aa8.7□□□□□ -1.02
SSH3-203ENST00000376757 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
SSH3-203ENST00000376757 LINC00304Q8N9R0 145 aa8.63□□□□□ -1.03
SSH3-203ENST00000376757 DYNC1H1Q14204 4646 aaKnown RBP8.59□□□□□ -1.03
SSH3-203ENST00000376757 H0YAA0 97 aa8.58□□□□□ -1.04
SSH3-203ENST00000376757 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
SSH3-203ENST00000376757 MYCBP2O75592 4640 aa8.55□□□□□ -1.04
SSH3-203ENST00000376757 KRTAP3-1Q9BYR8 98 aa8.54□□□□□ -1.04
SSH3-203ENST00000376757 SACSQ9NZJ4 4579 aa8.53□□□□□ -1.04
SSH3-203ENST00000376757 LRP1Q07954 4544 aaKnown RBP8.48□□□□□ -1.05
SSH3-203ENST00000376757 A0A1B0GU33 70 aa8.47□□□□□ -1.05
SSH3-203ENST00000376757 A8MUU9 505 aa8.41□□□□□ -1.06
SSH3-203ENST00000376757 APOBP04114 4563 aaKnown RBP8.41□□□□□ -1.06
SSH3-203ENST00000376757 HSPG2P98160 4391 aa8.4□□□□□ -1.07
SSH3-203ENST00000376757 H1FX-AS1Q4G0G2 97 aa8.38□□□□□ -1.07
SSH3-203ENST00000376757 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
SSH3-203ENST00000376757 PKHD1L1Q86WI1 4243 aa8.36□□□□□ -1.07
SSH3-203ENST00000376757 A0A0D9SG42 100 aa8.32□□□□□ -1.08
SSH3-203ENST00000376757 COX6B2Q6YFQ2 88 aa8.31□□□□□ -1.08
SSH3-203ENST00000376757 KMT2CQ8NEZ4 4911 aaKnown RBP8.31□□□□□ -1.08
SSH3-203ENST00000376757 KRTAP25-1Q3LHN0 102 aa8.28□□□□□ -1.08
SSH3-203ENST00000376757 H3BS24 57 aa8.28□□□□□ -1.08
SSH3-203ENST00000376757 RPS29P62273 56 aaKnown RBP8.25□□□□□ -1.09
SSH3-203ENST00000376757 FAT3Q8TDW7 4589 aa8.23□□□□□ -1.09
SSH3-203ENST00000376757 KRTAP10-4P60372 401 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms