RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 APOBP04114 4563 aaKnown RBP5.76□□□□□ -1.49
TRIM39-202ENST00000376659 WWC2-AS2Q96NR7 200 aa5.76□□□□□ -1.49
TRIM39-202ENST00000376659 RPL37AP61513 92 aaKnown RBP5.76□□□□□ -1.49
TRIM39-202ENST00000376659 IGLV5-52A0A0A0MRZ9 124 aa5.75□□□□□ -1.49
TRIM39-202ENST00000376659 DEFB116Q30KQ4 102 aa5.75□□□□□ -1.49
TRIM39-202ENST00000376659 MMP24-AS1A0A0U1RRL7 71 aa5.74□□□□□ -1.49
TRIM39-202ENST00000376659 A8MWP4 228 aa5.74□□□□□ -1.49
TRIM39-202ENST00000376659 RTL8CO15255 209 aa5.73□□□□□ -1.49
TRIM39-202ENST00000376659 PSORS1C2Q9UIG4 136 aa5.73□□□□□ -1.49
TRIM39-202ENST00000376659 MOBPQ13875 183 aa5.72□□□□□ -1.49
TRIM39-202ENST00000376659 LIMD2Q9BT23 127 aa5.72□□□□□ -1.49
TRIM39-202ENST00000376659 PRAC1Q96KF2 57 aa5.71□□□□□ -1.49
TRIM39-202ENST00000376659 TGP01266 2768 aa5.7□□□□□ -1.5
TRIM39-202ENST00000376659 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
TRIM39-202ENST00000376659 CYP4F30PQ9H0H9 118 aa5.7□□□□□ -1.5
TRIM39-202ENST00000376659 Q8N9P0 234 aaPredicted RBP5.69□□□□□ -1.5
TRIM39-202ENST00000376659 Q6ZSA8 131 aa5.68□□□□□ -1.5
TRIM39-202ENST00000376659 KRTAP13-3Q3SY46 172 aa5.67□□□□□ -1.5
TRIM39-202ENST00000376659 LINC00313P59037 77 aa5.66□□□□□ -1.5
TRIM39-202ENST00000376659 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
TRIM39-202ENST00000376659 ZNF861PO60384 105 aa5.66□□□□□ -1.5
TRIM39-202ENST00000376659 DYNC1H1Q14204 4646 aaKnown RBP5.66□□□□□ -1.5
TRIM39-202ENST00000376659 WFDC13Q8IUB5 93 aa5.65□□□□□ -1.5
TRIM39-202ENST00000376659 RYR2Q92736 4967 aa5.65□□□□□ -1.51
TRIM39-202ENST00000376659 CASC2Q6XLA1 102 aa5.65□□□□□ -1.51
TRIM39-202ENST00000376659 LINC00208Q96KT6 92 aa5.65□□□□□ -1.51
TRIM39-202ENST00000376659 KRTAP10-2P60368 255 aa5.64□□□□□ -1.51
TRIM39-202ENST00000376659 Q75L30 129 aa5.64□□□□□ -1.51
TRIM39-202ENST00000376659 ANAPC11Q9NYG5 84 aa5.63□□□□□ -1.51
TRIM39-202ENST00000376659 A0A087X002 238 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 H3BPC8 53 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 NDUFB1O75438 58 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 MP68P56378 58 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 NOTCH2NLQ7Z3S9 236 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 SPANXA2-OT1Q8N9U9 137 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 IGLV9-49A0A0B4J1Y8 123 aa5.62□□□□□ -1.51
TRIM39-202ENST00000376659 ZNF706Q9Y5V0 76 aaPredicted RBP5.61□□□□□ -1.51
TRIM39-202ENST00000376659 ADM2Q7Z4H4 148 aa5.61□□□□□ -1.51
TRIM39-202ENST00000376659 LOC101927531A0A1B0GV80 90 aa5.61□□□□□ -1.51
TRIM39-202ENST00000376659 C8orf17Q9NRJ1 99 aa5.6□□□□□ -1.51
TRIM39-202ENST00000376659 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
TRIM39-202ENST00000376659 C1orf134Q5TEV5 83 aa5.6□□□□□ -1.51
TRIM39-202ENST00000376659 H0Y9P7 68 aa5.59□□□□□ -1.51
TRIM39-202ENST00000376659 KRTAP13-2Q52LG2 175 aa5.58□□□□□ -1.52
TRIM39-202ENST00000376659 CIRBP-AS1Q8TBR5 109 aa5.58□□□□□ -1.52
TRIM39-202ENST00000376659 TNXBP22105 4242 aa5.57□□□□□ -1.52
TRIM39-202ENST00000376659 KRTAP1-4P0C5Y4 121 aa5.57□□□□□ -1.52
TRIM39-202ENST00000376659 HSPG2P98160 4391 aa5.57□□□□□ -1.52
TRIM39-202ENST00000376659 SPAG11AQ6PDA7 123 aa5.56□□□□□ -1.52
TRIM39-202ENST00000376659 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
TRIM39-202ENST00000376659 KRTAP10-1P60331 282 aa5.56□□□□□ -1.52
TRIM39-202ENST00000376659 SPINK7P58062 85 aa5.54□□□□□ -1.52
TRIM39-202ENST00000376659 KMT2CQ8NEZ4 4911 aaKnown RBP5.54□□□□□ -1.52
TRIM39-202ENST00000376659 IGLV7-46A0A075B6I9 117 aa5.54□□□□□ -1.52
TRIM39-202ENST00000376659 KRTAP16-1A8MUX0 517 aa5.53□□□□□ -1.52
TRIM39-202ENST00000376659 TP53AIP1Q9HCN2 124 aa5.53□□□□□ -1.52
TRIM39-202ENST00000376659 Q5W150 140 aa5.52□□□□□ -1.53
TRIM39-202ENST00000376659 COA5Q86WW8 74 aa5.52□□□□□ -1.53
TRIM39-202ENST00000376659 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
TRIM39-202ENST00000376659 LY6G6CO95867 125 aa5.49□□□□□ -1.53
TRIM39-202ENST00000376659 FAT3Q8TDW7 4589 aa5.49□□□□□ -1.53
TRIM39-202ENST00000376659 IGHV6-1A0A0B4J1U7 121 aa5.49□□□□□ -1.53
TRIM39-202ENST00000376659 FAT1Q14517 4588 aa5.49□□□□□ -1.53
TRIM39-202ENST00000376659 SSBP3-AS1Q7Z2R9 100 aa5.49□□□□□ -1.53
TRIM39-202ENST00000376659 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
TRIM39-202ENST00000376659 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
TRIM39-202ENST00000376659 LINC01558Q9Y6Z2 57 aa5.46□□□□□ -1.54
TRIM39-202ENST00000376659 CSAG1Q6PB30 78 aa5.44□□□□□ -1.54
TRIM39-202ENST00000376659 A0A1B0GVY2 172 aa5.44□□□□□ -1.54
TRIM39-202ENST00000376659 RYR3Q15413 4870 aa5.43□□□□□ -1.54
TRIM39-202ENST00000376659 A0A0A0MQY5 61 aa5.42□□□□□ -1.54
TRIM39-202ENST00000376659 HRES1P13985 223 aa5.41□□□□□ -1.54
TRIM39-202ENST00000376659 PCOTHQ58A44 107 aa5.41□□□□□ -1.54
TRIM39-202ENST00000376659 SPINK6Q6UWN8 80 aa5.39□□□□□ -1.55
TRIM39-202ENST00000376659 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
TRIM39-202ENST00000376659 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
TRIM39-202ENST00000376659 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
TRIM39-202ENST00000376659 LRP1Q07954 4544 aaKnown RBP5.34□□□□□ -1.56
TRIM39-202ENST00000376659 CDK2AP2O75956 126 aa5.34□□□□□ -1.56
TRIM39-202ENST00000376659 RYR1P21817 5038 aa5.32□□□□□ -1.56
TRIM39-202ENST00000376659 ROMO1P60602 79 aa5.31□□□□□ -1.56
TRIM39-202ENST00000376659 FAM229AH3BQW9 127 aa5.3□□□□□ -1.56
TRIM39-202ENST00000376659 SPINK1P00995 79 aa5.29□□□□□ -1.56
TRIM39-202ENST00000376659 MIR22HGQ0VDD5 57 aa5.28□□□□□ -1.56
TRIM39-202ENST00000376659 TYMSOSQ8TAI1 123 aa5.25□□□□□ -1.57
TRIM39-202ENST00000376659 KRTAP17-1Q9BYP8 105 aa5.24□□□□□ -1.57
TRIM39-202ENST00000376659 A0A1B0GU69 56 aa5.23□□□□□ -1.57
TRIM39-202ENST00000376659 C20orf166-AS1Q96NR2 134 aa5.23□□□□□ -1.57
TRIM39-202ENST00000376659 A8MUU9 505 aa5.22□□□□□ -1.57
TRIM39-202ENST00000376659 SPATA8Q6RVD6 105 aa5.22□□□□□ -1.57
TRIM39-202ENST00000376659 IGKV2D-30A0A075B6S6 120 aa5.22□□□□□ -1.57
TRIM39-202ENST00000376659 LINC00304Q8N9R0 145 aa5.21□□□□□ -1.58
TRIM39-202ENST00000376659 ACYP2P14621 99 aa5.2□□□□□ -1.58
TRIM39-202ENST00000376659 UQCR11O14957 56 aa5.19□□□□□ -1.58
TRIM39-202ENST00000376659 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
TRIM39-202ENST00000376659 MYCBP2O75592 4640 aa5.18□□□□□ -1.58
TRIM39-202ENST00000376659 EPPK1P58107 5090 aaKnown RBP5.18□□□□□ -1.58
TRIM39-202ENST00000376659 LPAP08519 4548 aa5.17□□□□□ -1.58
TRIM39-202ENST00000376659 SMR3BP02814 79 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms