RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 Q6ZVQ6 151 aa6.06□□□□□ -1.44
PDPN-203ENST00000376061 FAT3Q8TDW7 4589 aa6.05□□□□□ -1.44
PDPN-203ENST00000376061 LINC00304Q8N9R0 145 aa6.05□□□□□ -1.44
PDPN-203ENST00000376061 UBL5Q9BZL1 73 aa6.05□□□□□ -1.44
PDPN-203ENST00000376061 MYCBP2O75592 4640 aa6.04□□□□□ -1.44
PDPN-203ENST00000376061 KRTAP10-8P60410 259 aa6.04□□□□□ -1.44
PDPN-203ENST00000376061 NREPQ16612 68 aa6.02□□□□□ -1.45
PDPN-203ENST00000376061 SPAG11AQ6PDA7 123 aa6.02□□□□□ -1.45
PDPN-203ENST00000376061 LINC00643Q86TS7 51 aa6.02□□□□□ -1.45
PDPN-203ENST00000376061 SS18L2Q9UHA2 77 aa6.02□□□□□ -1.45
PDPN-203ENST00000376061 TNXBP22105 4242 aa6.02□□□□□ -1.45
PDPN-203ENST00000376061 SPINK1P00995 79 aa6.01□□□□□ -1.45
PDPN-203ENST00000376061 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
PDPN-203ENST00000376061 SEC61BP60468 96 aaKnown RBP6□□□□□ -1.45
PDPN-203ENST00000376061 Q5XG85 94 aa6□□□□□ -1.45
PDPN-203ENST00000376061 LIMD2Q9BT23 127 aa6□□□□□ -1.45
PDPN-203ENST00000376061 OXTP01178 125 aa5.99□□□□□ -1.45
PDPN-203ENST00000376061 RPS29P62273 56 aaKnown RBP5.99□□□□□ -1.45
PDPN-203ENST00000376061 ASB16-AS1Q495Z4 193 aa5.99□□□□□ -1.45
PDPN-203ENST00000376061 Q96NJ1 140 aa5.99□□□□□ -1.45
PDPN-203ENST00000376061 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
PDPN-203ENST00000376061 ATP5EP2Q5VTU8 51 aa5.98□□□□□ -1.45
PDPN-203ENST00000376061 IGKV3D-7A0A0C4DH55 119 aa5.97□□□□□ -1.45
PDPN-203ENST00000376061 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
PDPN-203ENST00000376061 DEFB116Q30KQ4 102 aa5.97□□□□□ -1.45
PDPN-203ENST00000376061 BPY2O14599 106 aa5.96□□□□□ -1.45
PDPN-203ENST00000376061 CXCL6P80162 114 aa5.96□□□□□ -1.45
PDPN-203ENST00000376061 KRTAP29-1A8MX34 341 aaPredicted RBP5.95□□□□□ -1.46
PDPN-203ENST00000376061 SIGMAR1Q99720 223 aa5.95□□□□□ -1.46
PDPN-203ENST00000376061 DSCR10P59022 87 aa5.94□□□□□ -1.46
PDPN-203ENST00000376061 C1orf195Q5TG92 126 aa5.94□□□□□ -1.46
PDPN-203ENST00000376061 ABCA13Q86UQ4 5058 aa5.94□□□□□ -1.46
PDPN-203ENST00000376061 J3KT08 172 aa5.93□□□□□ -1.46
PDPN-203ENST00000376061 IGKV4-1P06312 121 aa5.93□□□□□ -1.46
PDPN-203ENST00000376061 Q8N9L7 120 aa5.93□□□□□ -1.46
PDPN-203ENST00000376061 DMBT1Q9UGM3 2413 aaPredicted RBP5.91□□□□□ -1.46
PDPN-203ENST00000376061 A8MWP4 228 aa5.91□□□□□ -1.46
PDPN-203ENST00000376061 K7EQZ3 153 aa5.91□□□□□ -1.46
PDPN-203ENST00000376061 HIST1H4AP62805 103 aaKnown RBP5.89□□□□□ -1.47
PDPN-203ENST00000376061 RETNLBQ9BQ08 111 aa5.89□□□□□ -1.47
PDPN-203ENST00000376061 PRR15Q8IV56 129 aa5.88□□□□□ -1.47
PDPN-203ENST00000376061 IMUPQ9GZP8 106 aa5.88□□□□□ -1.47
PDPN-203ENST00000376061 A0A087WVE0 104 aa5.87□□□□□ -1.47
PDPN-203ENST00000376061 A0A1B0GVX0 72 aa5.87□□□□□ -1.47
PDPN-203ENST00000376061 NDUFB1O75438 58 aa5.86□□□□□ -1.47
PDPN-203ENST00000376061 IGHV6-1A0A0B4J1U7 121 aa5.85□□□□□ -1.47
PDPN-203ENST00000376061 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
PDPN-203ENST00000376061 FP248Q71RG6 208 aaPredicted RBP5.82□□□□□ -1.48
PDPN-203ENST00000376061 NOTCH2NLQ7Z3S9 236 aa5.82□□□□□ -1.48
PDPN-203ENST00000376061 C8orf17Q9NRJ1 99 aa5.82□□□□□ -1.48
PDPN-203ENST00000376061 HCG22E2RYF7 251 aa5.81□□□□□ -1.48
PDPN-203ENST00000376061 FAM236AA0A1B0GUQ0 79 aa5.8□□□□□ -1.48
PDPN-203ENST00000376061 FAM236BA0A1B0GV22 79 aa5.8□□□□□ -1.48
PDPN-203ENST00000376061 C8orf87E5RJ46 101 aa5.8□□□□□ -1.48
PDPN-203ENST00000376061 SCGB1A1P11684 91 aa5.8□□□□□ -1.48
PDPN-203ENST00000376061 WFDC13Q8IUB5 93 aa5.8□□□□□ -1.48
PDPN-203ENST00000376061 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
PDPN-203ENST00000376061 CASC2Q6XLA1 102 aa5.79□□□□□ -1.48
PDPN-203ENST00000376061 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
PDPN-203ENST00000376061 C4orf26Q17RF5 130 aa5.78□□□□□ -1.48
PDPN-203ENST00000376061 IGLV7-46A0A075B6I9 117 aa5.77□□□□□ -1.49
PDPN-203ENST00000376061 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.49
PDPN-203ENST00000376061 LINC00313P59037 77 aa5.77□□□□□ -1.49
PDPN-203ENST00000376061 PCLOQ9Y6V0 5065 aa5.76□□□□□ -1.49
PDPN-203ENST00000376061 C9orf92A6NGG3 77 aa5.76□□□□□ -1.49
PDPN-203ENST00000376061 PRR4Q16378 134 aa5.76□□□□□ -1.49
PDPN-203ENST00000376061 TMEM254Q8TBM7 123 aa5.76□□□□□ -1.49
PDPN-203ENST00000376061 KRTAP13-3Q3SY46 172 aa5.74□□□□□ -1.49
PDPN-203ENST00000376061 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
PDPN-203ENST00000376061 ATOX1O00244 68 aa5.72□□□□□ -1.49
PDPN-203ENST00000376061 SMIM20Q8N5G0 67 aa5.72□□□□□ -1.49
PDPN-203ENST00000376061 TPRXLQ17RH7 258 aa5.7□□□□□ -1.5
PDPN-203ENST00000376061 Q8N9P0 234 aaPredicted RBP5.7□□□□□ -1.5
PDPN-203ENST00000376061 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
PDPN-203ENST00000376061 PRO0628Q9UI54 55 aa5.7□□□□□ -1.5
PDPN-203ENST00000376061 NDUFS5O43920 106 aa5.68□□□□□ -1.5
PDPN-203ENST00000376061 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
PDPN-203ENST00000376061 A8MUU9 505 aa5.67□□□□□ -1.5
PDPN-203ENST00000376061 TRAV7A0A075B6U4 112 aa5.66□□□□□ -1.5
PDPN-203ENST00000376061 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
PDPN-203ENST00000376061 TP53AIP1Q9HCN2 124 aa5.65□□□□□ -1.51
PDPN-203ENST00000376061 HERC1Q15751 4861 aa5.64□□□□□ -1.51
PDPN-203ENST00000376061 UQCRQO14949 82 aa5.64□□□□□ -1.51
PDPN-203ENST00000376061 SERP2Q8N6R1 65 aa5.64□□□□□ -1.51
PDPN-203ENST00000376061 LPAP08519 4548 aa5.63□□□□□ -1.51
PDPN-203ENST00000376061 RPL37P61927 97 aaKnown RBP5.62□□□□□ -1.51
PDPN-203ENST00000376061 Q5W150 140 aa5.61□□□□□ -1.51
PDPN-203ENST00000376061 TRAV22A0A0B4J277 110 aa5.6□□□□□ -1.51
PDPN-203ENST00000376061 ZCCHC13Q8WW36 166 aaKnown RBP5.6□□□□□ -1.51
PDPN-203ENST00000376061 H0Y9P7 68 aa5.59□□□□□ -1.51
PDPN-203ENST00000376061 COX7CP15954 63 aa5.59□□□□□ -1.51
PDPN-203ENST00000376061 LRP2P98164 4655 aa5.57□□□□□ -1.52
PDPN-203ENST00000376061 A0A0U1RQV1 116 aa5.56□□□□□ -1.52
PDPN-203ENST00000376061 MP68P56378 58 aa5.55□□□□□ -1.52
PDPN-203ENST00000376061 HMCN2Q8NDA2 5059 aa5.55□□□□□ -1.52
PDPN-203ENST00000376061 ATP11AUNQ6ZP68 121 aa5.55□□□□□ -1.52
PDPN-203ENST00000376061 C20orf197Q8N268 126 aa5.55□□□□□ -1.52
PDPN-203ENST00000376061 CCDC179H3BU77 68 aa5.54□□□□□ -1.52
PDPN-203ENST00000376061 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
PDPN-203ENST00000376061 H3BPC8 53 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms