RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 SPAG11AQ6PDA7 123 aa8.46□□□□□ -1.06
CLCNKA-202ENST00000375692 SPTSSBQ8NFR3 76 aa8.46□□□□□ -1.06
CLCNKA-202ENST00000375692 A0A1B0GVX0 72 aa8.44□□□□□ -1.06
CLCNKA-202ENST00000375692 A6NED7 52 aa8.44□□□□□ -1.06
CLCNKA-202ENST00000375692 Q75L30 129 aa8.44□□□□□ -1.06
CLCNKA-202ENST00000375692 SPACA4Q8TDM5 124 aa8.44□□□□□ -1.06
CLCNKA-202ENST00000375692 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
CLCNKA-202ENST00000375692 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
CLCNKA-202ENST00000375692 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
CLCNKA-202ENST00000375692 CDK2AP2O75956 126 aa8.4□□□□□ -1.06
CLCNKA-202ENST00000375692 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.06
CLCNKA-202ENST00000375692 HRES1P13985 223 aa8.4□□□□□ -1.07
CLCNKA-202ENST00000375692 HECTD4Q9Y4D8 3996 aa8.39□□□□□ -1.07
CLCNKA-202ENST00000375692 C1orf134Q5TEV5 83 aa8.39□□□□□ -1.07
CLCNKA-202ENST00000375692 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
CLCNKA-202ENST00000375692 A0A087WTM6 91 aa8.39□□□□□ -1.07
CLCNKA-202ENST00000375692 SPINK6Q6UWN8 80 aa8.36□□□□□ -1.07
CLCNKA-202ENST00000375692 LINC01558Q9Y6Z2 57 aa8.36□□□□□ -1.07
CLCNKA-202ENST00000375692 Q5W150 140 aa8.35□□□□□ -1.07
CLCNKA-202ENST00000375692 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
CLCNKA-202ENST00000375692 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
CLCNKA-202ENST00000375692 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
CLCNKA-202ENST00000375692 IGLV5-52A0A0A0MRZ9 124 aa8.34□□□□□ -1.07
CLCNKA-202ENST00000375692 ALMS1Q8TCU4 4167 aa8.33□□□□□ -1.08
CLCNKA-202ENST00000375692 RTL8CO15255 209 aa8.33□□□□□ -1.08
CLCNKA-202ENST00000375692 SPINK7P58062 85 aa8.32□□□□□ -1.08
CLCNKA-202ENST00000375692 CDC42SE1Q9NRR8 79 aa8.32□□□□□ -1.08
CLCNKA-202ENST00000375692 DNAH17Q9UFH2 4485 aa8.31□□□□□ -1.08
CLCNKA-202ENST00000375692 ZNF861PO60384 105 aa8.31□□□□□ -1.08
CLCNKA-202ENST00000375692 PRR26Q8N8Z3 221 aa8.31□□□□□ -1.08
CLCNKA-202ENST00000375692 SACSQ9NZJ4 4579 aa8.31□□□□□ -1.08
CLCNKA-202ENST00000375692 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
CLCNKA-202ENST00000375692 KTN1-AS1Q86SY8 53 aa8.29□□□□□ -1.08
CLCNKA-202ENST00000375692 KMT2CQ8NEZ4 4911 aaKnown RBP8.28□□□□□ -1.08
CLCNKA-202ENST00000375692 A6NN06 94 aa8.28□□□□□ -1.08
CLCNKA-202ENST00000375692 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
CLCNKA-202ENST00000375692 CIRBP-AS1Q8TBR5 109 aa8.27□□□□□ -1.08
CLCNKA-202ENST00000375692 KRTAP13-3Q3SY46 172 aa8.26□□□□□ -1.09
CLCNKA-202ENST00000375692 FAT2Q9NYQ8 4349 aa8.26□□□□□ -1.09
CLCNKA-202ENST00000375692 DNAH11Q96DT5 4516 aa8.23□□□□□ -1.09
CLCNKA-202ENST00000375692 RETNLBQ9BQ08 111 aa8.22□□□□□ -1.09
CLCNKA-202ENST00000375692 PKD1P98161 4303 aa8.2□□□□□ -1.1
CLCNKA-202ENST00000375692 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
CLCNKA-202ENST00000375692 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
CLCNKA-202ENST00000375692 DNAH5Q8TE73 4624 aa8.18□□□□□ -1.1
CLCNKA-202ENST00000375692 RYR2Q92736 4967 aa8.18□□□□□ -1.1
CLCNKA-202ENST00000375692 ACYP2P14621 99 aa8.17□□□□□ -1.1
CLCNKA-202ENST00000375692 PKHD1P08F94 4074 aa8.17□□□□□ -1.1
CLCNKA-202ENST00000375692 KRTAP10-1P60331 282 aa8.15□□□□□ -1.11
CLCNKA-202ENST00000375692 LINC00313P59037 77 aa8.13□□□□□ -1.11
CLCNKA-202ENST00000375692 C7orf65Q6ZTY9 151 aa8.13□□□□□ -1.11
CLCNKA-202ENST00000375692 C8orf87E5RJ46 101 aa8.12□□□□□ -1.11
CLCNKA-202ENST00000375692 DMAC1Q96GE9 116 aa8.12□□□□□ -1.11
CLCNKA-202ENST00000375692 SSBP3-AS1Q7Z2R9 100 aa8.1□□□□□ -1.11
CLCNKA-202ENST00000375692 RYR3Q15413 4870 aa8.08□□□□□ -1.12
CLCNKA-202ENST00000375692 FAM229AH3BQW9 127 aa8.07□□□□□ -1.12
CLCNKA-202ENST00000375692 IGKV2-30P06310 120 aa8.06□□□□□ -1.12
CLCNKA-202ENST00000375692 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
CLCNKA-202ENST00000375692 LRP1BQ9NZR2 4599 aa8.05□□□□□ -1.12
CLCNKA-202ENST00000375692 A0A1B0GU69 56 aa8.05□□□□□ -1.12
CLCNKA-202ENST00000375692 Q6ZSA8 131 aa8.04□□□□□ -1.12
CLCNKA-202ENST00000375692 A0A1B0GVY2 172 aa8.03□□□□□ -1.12
CLCNKA-202ENST00000375692 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
CLCNKA-202ENST00000375692 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
CLCNKA-202ENST00000375692 IGKV2D-30A0A075B6S6 120 aa8.01□□□□□ -1.13
CLCNKA-202ENST00000375692 ADM2Q7Z4H4 148 aa8□□□□□ -1.13
CLCNKA-202ENST00000375692 DYNC1H1Q14204 4646 aaKnown RBP7.99□□□□□ -1.13
CLCNKA-202ENST00000375692 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
CLCNKA-202ENST00000375692 VPS13BQ7Z7G8 4022 aa7.94□□□□□ -1.14
CLCNKA-202ENST00000375692 SMR3BP02814 79 aaPredicted RBP7.93□□□□□ -1.14
CLCNKA-202ENST00000375692 MIR22HGQ0VDD5 57 aa7.93□□□□□ -1.14
CLCNKA-202ENST00000375692 UQCR11O14957 56 aa7.9□□□□□ -1.14
CLCNKA-202ENST00000375692 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
CLCNKA-202ENST00000375692 SPINK1P00995 79 aa7.88□□□□□ -1.15
CLCNKA-202ENST00000375692 PLA2G1BP04054 148 aaKnown RBP7.88□□□□□ -1.15
CLCNKA-202ENST00000375692 APOBP04114 4563 aaKnown RBP7.87□□□□□ -1.15
CLCNKA-202ENST00000375692 FAT1Q14517 4588 aa7.87□□□□□ -1.15
CLCNKA-202ENST00000375692 Q8N1X5 172 aa7.85□□□□□ -1.15
CLCNKA-202ENST00000375692 C4orf48Q5BLP8 95 aa7.83□□□□□ -1.16
CLCNKA-202ENST00000375692 EPPK1P58107 5090 aaKnown RBP7.81□□□□□ -1.16
CLCNKA-202ENST00000375692 TYMSOSQ8TAI1 123 aa7.81□□□□□ -1.16
CLCNKA-202ENST00000375692 KIAA1109Q2LD37 5005 aa7.76□□□□□ -1.17
CLCNKA-202ENST00000375692 KRTAP10-4P60372 401 aaPredicted RBP7.75□□□□□ -1.17
CLCNKA-202ENST00000375692 KRTAP17-1Q9BYP8 105 aa7.75□□□□□ -1.17
CLCNKA-202ENST00000375692 HSPG2P98160 4391 aa7.73□□□□□ -1.17
CLCNKA-202ENST00000375692 LINC01554Q52M75 96 aa7.73□□□□□ -1.17
CLCNKA-202ENST00000375692 CSAG1Q6PB30 78 aa7.72□□□□□ -1.17
CLCNKA-202ENST00000375692 RYR1P21817 5038 aa7.68□□□□□ -1.18
CLCNKA-202ENST00000375692 LINC00304Q8N9R0 145 aa7.68□□□□□ -1.18
CLCNKA-202ENST00000375692 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
CLCNKA-202ENST00000375692 H0YAA0 97 aa7.65□□□□□ -1.18
CLCNKA-202ENST00000375692 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
CLCNKA-202ENST00000375692 Q5VSD8 79 aa7.63□□□□□ -1.19
CLCNKA-202ENST00000375692 FLG2Q5D862 2391 aaPredicted RBP7.63□□□□□ -1.19
CLCNKA-202ENST00000375692 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
CLCNKA-202ENST00000375692 A0A1B0GU33 70 aa7.57□□□□□ -1.2
CLCNKA-202ENST00000375692 A8MUU9 505 aa7.56□□□□□ -1.2
CLCNKA-202ENST00000375692 RPS29P62273 56 aaKnown RBP7.56□□□□□ -1.2
CLCNKA-202ENST00000375692 C20orf166-AS1Q96NR2 134 aa7.56□□□□□ -1.2
CLCNKA-202ENST00000375692 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms