RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 ASB16-AS1Q495Z4 193 aa6.24□□□□□ -1.41
HLA-DQA1-202ENST00000374949 J3KT08 172 aa6.23□□□□□ -1.41
HLA-DQA1-202ENST00000374949 DEFB116Q30KQ4 102 aa6.23□□□□□ -1.41
HLA-DQA1-202ENST00000374949 RPS29P62273 56 aaKnown RBP6.22□□□□□ -1.41
HLA-DQA1-202ENST00000374949 RETNLBQ9BQ08 111 aa6.22□□□□□ -1.41
HLA-DQA1-202ENST00000374949 IMUPQ9GZP8 106 aa6.22□□□□□ -1.41
HLA-DQA1-202ENST00000374949 Q96NJ1 140 aa6.21□□□□□ -1.42
HLA-DQA1-202ENST00000374949 IGKV4-1P06312 121 aa6.2□□□□□ -1.42
HLA-DQA1-202ENST00000374949 HIST1H4AP62805 103 aaKnown RBP6.2□□□□□ -1.42
HLA-DQA1-202ENST00000374949 DSCR10P59022 87 aa6.19□□□□□ -1.42
HLA-DQA1-202ENST00000374949 C1orf195Q5TG92 126 aa6.18□□□□□ -1.42
HLA-DQA1-202ENST00000374949 A8MWP4 228 aa6.17□□□□□ -1.42
HLA-DQA1-202ENST00000374949 NDUFB1O75438 58 aa6.17□□□□□ -1.42
HLA-DQA1-202ENST00000374949 Q8N9L7 120 aa6.16□□□□□ -1.42
HLA-DQA1-202ENST00000374949 MUC17Q685J3 4493 aa6.15□□□□□ -1.42
HLA-DQA1-202ENST00000374949 K7EQZ3 153 aa6.15□□□□□ -1.42
HLA-DQA1-202ENST00000374949 PRR15Q8IV56 129 aa6.15□□□□□ -1.42
HLA-DQA1-202ENST00000374949 A0A087WVE0 104 aa6.13□□□□□ -1.43
HLA-DQA1-202ENST00000374949 TPRXLQ17RH7 258 aa6.13□□□□□ -1.43
HLA-DQA1-202ENST00000374949 FSIP2Q5CZC0 6907 aa6.13□□□□□ -1.43
HLA-DQA1-202ENST00000374949 IGLV7-46A0A075B6I9 117 aa6.12□□□□□ -1.43
HLA-DQA1-202ENST00000374949 SCGB1A1P11684 91 aa6.12□□□□□ -1.43
HLA-DQA1-202ENST00000374949 IGHV6-1A0A0B4J1U7 121 aa6.11□□□□□ -1.43
HLA-DQA1-202ENST00000374949 A0A1B0GVX0 72 aa6.11□□□□□ -1.43
HLA-DQA1-202ENST00000374949 FAM236AA0A1B0GUQ0 79 aa6.08□□□□□ -1.44
HLA-DQA1-202ENST00000374949 FAM236BA0A1B0GV22 79 aa6.08□□□□□ -1.44
HLA-DQA1-202ENST00000374949 HCG22E2RYF7 251 aa6.08□□□□□ -1.44
HLA-DQA1-202ENST00000374949 C8orf17Q9NRJ1 99 aa6.08□□□□□ -1.44
HLA-DQA1-202ENST00000374949 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
HLA-DQA1-202ENST00000374949 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
HLA-DQA1-202ENST00000374949 LINC00313P59037 77 aa6.06□□□□□ -1.44
HLA-DQA1-202ENST00000374949 CASC2Q6XLA1 102 aa6.06□□□□□ -1.44
HLA-DQA1-202ENST00000374949 WFDC13Q8IUB5 93 aa6.05□□□□□ -1.44
HLA-DQA1-202ENST00000374949 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
HLA-DQA1-202ENST00000374949 FP248Q71RG6 208 aaPredicted RBP6.04□□□□□ -1.44
HLA-DQA1-202ENST00000374949 NOTCH2NLQ7Z3S9 236 aa6.04□□□□□ -1.44
HLA-DQA1-202ENST00000374949 ATOX1O00244 68 aa6.03□□□□□ -1.44
HLA-DQA1-202ENST00000374949 TMEM254Q8TBM7 123 aa6.02□□□□□ -1.45
HLA-DQA1-202ENST00000374949 LCE2DQ5TA82 110 aaPredicted RBP6.01□□□□□ -1.45
HLA-DQA1-202ENST00000374949 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
HLA-DQA1-202ENST00000374949 KRTAP13-3Q3SY46 172 aa6□□□□□ -1.45
HLA-DQA1-202ENST00000374949 SMIM20Q8N5G0 67 aa6□□□□□ -1.45
HLA-DQA1-202ENST00000374949 MRPL34Q9BQ48 92 aaKnown RBP6□□□□□ -1.45
HLA-DQA1-202ENST00000374949 CRCT1Q9UGL9 99 aa5.99□□□□□ -1.45
HLA-DQA1-202ENST00000374949 ANAPC13Q9BS18 74 aa5.98□□□□□ -1.45
HLA-DQA1-202ENST00000374949 TRAV7A0A075B6U4 112 aa5.97□□□□□ -1.45
HLA-DQA1-202ENST00000374949 C9orf92A6NGG3 77 aa5.97□□□□□ -1.45
HLA-DQA1-202ENST00000374949 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.46
HLA-DQA1-202ENST00000374949 NDUFS5O43920 106 aa5.96□□□□□ -1.46
HLA-DQA1-202ENST00000374949 OCR1Q9BZK8 76 aa5.96□□□□□ -1.46
HLA-DQA1-202ENST00000374949 SERP2Q8N6R1 65 aa5.95□□□□□ -1.46
HLA-DQA1-202ENST00000374949 TP53AIP1Q9HCN2 124 aa5.95□□□□□ -1.46
HLA-DQA1-202ENST00000374949 UQCRQO14949 82 aa5.94□□□□□ -1.46
HLA-DQA1-202ENST00000374949 SEC61BP60468 96 aaKnown RBP5.94□□□□□ -1.46
HLA-DQA1-202ENST00000374949 Q8N9P0 234 aaPredicted RBP5.94□□□□□ -1.46
HLA-DQA1-202ENST00000374949 COX7CP15954 63 aa5.91□□□□□ -1.46
HLA-DQA1-202ENST00000374949 PCP4P48539 62 aa5.91□□□□□ -1.46
HLA-DQA1-202ENST00000374949 C5orf47Q569G3 176 aa5.9□□□□□ -1.46
HLA-DQA1-202ENST00000374949 A8MUU9 505 aa5.89□□□□□ -1.47
HLA-DQA1-202ENST00000374949 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
HLA-DQA1-202ENST00000374949 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
HLA-DQA1-202ENST00000374949 XP32Q5T750 250 aa5.87□□□□□ -1.47
HLA-DQA1-202ENST00000374949 MP68P56378 58 aa5.86□□□□□ -1.47
HLA-DQA1-202ENST00000374949 Q75L30 129 aa5.86□□□□□ -1.47
HLA-DQA1-202ENST00000374949 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
HLA-DQA1-202ENST00000374949 H0Y9P7 68 aa5.85□□□□□ -1.47
HLA-DQA1-202ENST00000374949 MT1HP80294 61 aa5.85□□□□□ -1.47
HLA-DQA1-202ENST00000374949 KRTAP19-2Q3LHN2 52 aa5.85□□□□□ -1.47
HLA-DQA1-202ENST00000374949 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
HLA-DQA1-202ENST00000374949 Q5W150 140 aa5.84□□□□□ -1.47
HLA-DQA1-202ENST00000374949 H3BPC8 53 aa5.83□□□□□ -1.48
HLA-DQA1-202ENST00000374949 C20orf197Q8N268 126 aa5.83□□□□□ -1.48
HLA-DQA1-202ENST00000374949 ZCCHC13Q8WW36 166 aaKnown RBP5.83□□□□□ -1.48
HLA-DQA1-202ENST00000374949 LINC00208Q96KT6 92 aa5.82□□□□□ -1.48
HLA-DQA1-202ENST00000374949 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
HLA-DQA1-202ENST00000374949 ATP11AUNQ6ZP68 121 aa5.81□□□□□ -1.48
HLA-DQA1-202ENST00000374949 C1orf64Q8NEQ6 169 aa5.81□□□□□ -1.48
HLA-DQA1-202ENST00000374949 SNURFQ9Y675 71 aa5.8□□□□□ -1.48
HLA-DQA1-202ENST00000374949 KLKP1Q107X0 134 aa5.79□□□□□ -1.48
HLA-DQA1-202ENST00000374949 PCOTHQ58A44 107 aa5.79□□□□□ -1.48
HLA-DQA1-202ENST00000374949 LOC101927531A0A1B0GV80 90 aa5.77□□□□□ -1.49
HLA-DQA1-202ENST00000374949 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
HLA-DQA1-202ENST00000374949 KRTAP10-6P60371 365 aaPredicted RBP5.77□□□□□ -1.49
HLA-DQA1-202ENST00000374949 NDUFC1O43677 76 aa5.74□□□□□ -1.49
HLA-DQA1-202ENST00000374949 IGKV2-30P06310 120 aa5.74□□□□□ -1.49
HLA-DQA1-202ENST00000374949 CYP4F30PQ9H0H9 118 aa5.74□□□□□ -1.49
HLA-DQA1-202ENST00000374949 IGKV2D-30A0A075B6S6 120 aa5.72□□□□□ -1.49
HLA-DQA1-202ENST00000374949 M0R2T5 61 aa5.71□□□□□ -1.5
HLA-DQA1-202ENST00000374949 CYSTM1Q9H1C7 97 aa5.71□□□□□ -1.5
HLA-DQA1-202ENST00000374949 C7orf65Q6ZTY9 151 aa5.7□□□□□ -1.5
HLA-DQA1-202ENST00000374949 H7BZZ5 65 aa5.69□□□□□ -1.5
HLA-DQA1-202ENST00000374949 SPINK7P58062 85 aa5.69□□□□□ -1.5
HLA-DQA1-202ENST00000374949 COX6B2Q6YFQ2 88 aa5.67□□□□□ -1.5
HLA-DQA1-202ENST00000374949 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.5
HLA-DQA1-202ENST00000374949 HRES1P13985 223 aa5.64□□□□□ -1.51
HLA-DQA1-202ENST00000374949 TMEM258P61165 79 aa5.64□□□□□ -1.51
HLA-DQA1-202ENST00000374949 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
HLA-DQA1-202ENST00000374949 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
HLA-DQA1-202ENST00000374949 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.61□□□□□ -1.51
HLA-DQA1-202ENST00000374949 SVIPQ8NHG7 77 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms