RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 KRTAP26-1Q6PEX3 210 aa4.22□□□□□ -1.73
CSMD2-206ENST00000373388 Q8NDZ9 215 aa4.22□□□□□ -1.73
CSMD2-206ENST00000373388 LAMA3Q16787 3333 aa4.2□□□□□ -1.74
CSMD2-206ENST00000373388 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
CSMD2-206ENST00000373388 FBN2P35556 2912 aa4.2□□□□□ -1.74
CSMD2-206ENST00000373388 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
CSMD2-206ENST00000373388 WWC2-AS2Q96NR7 200 aa4.18□□□□□ -1.74
CSMD2-206ENST00000373388 CELSR3Q9NYQ7 3312 aa4.18□□□□□ -1.74
CSMD2-206ENST00000373388 HTTP42858 3142 aa4.18□□□□□ -1.74
CSMD2-206ENST00000373388 BOD1L1Q8NFC6 3051 aa4.16□□□□□ -1.74
CSMD2-206ENST00000373388 TENM2Q9NT68 2774 aa4.16□□□□□ -1.74
CSMD2-206ENST00000373388 PLAC8Q9NZF1 115 aa4.15□□□□□ -1.74
CSMD2-206ENST00000373388 ATMQ13315 3056 aa4.15□□□□□ -1.75
CSMD2-206ENST00000373388 UNC80Q8N2C7 3258 aa4.13□□□□□ -1.75
CSMD2-206ENST00000373388 KRTAP4-16G5E9R7 235 aaPredicted RBP4.13□□□□□ -1.75
CSMD2-206ENST00000373388 M0R2T5 61 aa4.12□□□□□ -1.75
CSMD2-206ENST00000373388 A8MU10 97 aa4.11□□□□□ -1.75
CSMD2-206ENST00000373388 ADGRG4Q8IZF6 3080 aa4.11□□□□□ -1.75
CSMD2-206ENST00000373388 DNAH14Q0VDD8 3507 aa4.1□□□□□ -1.75
CSMD2-206ENST00000373388 COL7A1Q02388 2944 aa4.09□□□□□ -1.75
CSMD2-206ENST00000373388 RPS29P62273 56 aaKnown RBP4.09□□□□□ -1.75
CSMD2-206ENST00000373388 FBN1P35555 2871 aaKnown RBP4.09□□□□□ -1.75
CSMD2-206ENST00000373388 CELSR1Q9NYQ6 3014 aa4.08□□□□□ -1.76
CSMD2-206ENST00000373388 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
CSMD2-206ENST00000373388 P0C880 135 aa4.07□□□□□ -1.76
CSMD2-206ENST00000373388 TNP1P09430 55 aa4.07□□□□□ -1.76
CSMD2-206ENST00000373388 KRTAP1-3Q8IUG1 177 aa4.06□□□□□ -1.76
CSMD2-206ENST00000373388 COL6A3P12111 3177 aa4.05□□□□□ -1.76
CSMD2-206ENST00000373388 CDH23Q9H251 3354 aa4.05□□□□□ -1.76
CSMD2-206ENST00000373388 KRTAP1-1Q07627 177 aa4.04□□□□□ -1.76
CSMD2-206ENST00000373388 CFAP47Q6ZTR5 3102 aa3.98□□□□□ -1.77
CSMD2-206ENST00000373388 H0YAA0 97 aa3.95□□□□□ -1.78
CSMD2-206ENST00000373388 SZT2Q5T011 3432 aa3.95□□□□□ -1.78
CSMD2-206ENST00000373388 VCANP13611 3396 aa3.95□□□□□ -1.78
CSMD2-206ENST00000373388 KRTAP1-5Q9BYS1 174 aa3.95□□□□□ -1.78
CSMD2-206ENST00000373388 SPTBN5Q9NRC6 3674 aaKnown RBP3.92□□□□□ -1.78
CSMD2-206ENST00000373388 SPEGQ15772 3267 aa3.9□□□□□ -1.79
CSMD2-206ENST00000373388 USP34Q70CQ2 3546 aa3.88□□□□□ -1.79
CSMD2-206ENST00000373388 KRTAP10-1P60331 282 aa3.88□□□□□ -1.79
CSMD2-206ENST00000373388 EYSQ5T1H1 3165 aa3.87□□□□□ -1.79
CSMD2-206ENST00000373388 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
CSMD2-206ENST00000373388 HRNRQ86YZ3 2850 aaPredicted RBP3.86□□□□□ -1.79
CSMD2-206ENST00000373388 AKAP9Q99996 3911 aa3.86□□□□□ -1.79
CSMD2-206ENST00000373388 Q5VSD8 79 aa3.86□□□□□ -1.79
CSMD2-206ENST00000373388 WDFY3Q8IZQ1 3526 aa3.86□□□□□ -1.79
CSMD2-206ENST00000373388 Q6ZRN7 208 aaPredicted RBP3.85□□□□□ -1.79
CSMD2-206ENST00000373388 KRTAP13-1Q8IUC0 172 aa3.84□□□□□ -1.79
CSMD2-206ENST00000373388 INE1O15225 51 aa3.82□□□□□ -1.8
CSMD2-206ENST00000373388 MYO15AQ9UKN7 3530 aa3.81□□□□□ -1.8
CSMD2-206ENST00000373388 OTOGQ6ZRI0 2925 aa3.8□□□□□ -1.8
CSMD2-206ENST00000373388 MEGF8Q7Z7M0 2845 aa3.78□□□□□ -1.8
CSMD2-206ENST00000373388 FBN3Q75N90 2809 aa3.73□□□□□ -1.81
CSMD2-206ENST00000373388 KRTAP10-8P60410 259 aa3.73□□□□□ -1.81
CSMD2-206ENST00000373388 KRTAP7-1Q8IUC3 87 aa3.72□□□□□ -1.81
CSMD2-206ENST00000373388 KRTAP13-2Q52LG2 175 aa3.72□□□□□ -1.81
CSMD2-206ENST00000373388 LOC400499M0QZD8 3231 aa3.7□□□□□ -1.82
CSMD2-206ENST00000373388 PRO2289Q9P1D8 64 aa3.68□□□□□ -1.82
CSMD2-206ENST00000373388 LAMA5O15230 3695 aa3.67□□□□□ -1.82
CSMD2-206ENST00000373388 KRTAP13-4Q3LI77 160 aa3.66□□□□□ -1.82
CSMD2-206ENST00000373388 ZFHX3Q15911 3703 aa3.65□□□□□ -1.82
CSMD2-206ENST00000373388 ASPMQ8IZT6 3477 aa3.62□□□□□ -1.83
CSMD2-206ENST00000373388 BSNQ9UPA5 3926 aa3.62□□□□□ -1.83
CSMD2-206ENST00000373388 KRTAP13-3Q3SY46 172 aa3.62□□□□□ -1.83
CSMD2-206ENST00000373388 SMG1Q96Q15 3661 aaKnown RBP3.62□□□□□ -1.83
CSMD2-206ENST00000373388 NBPF19A0A087WUL8 3843 aa3.61□□□□□ -1.83
CSMD2-206ENST00000373388 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
CSMD2-206ENST00000373388 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
CSMD2-206ENST00000373388 CMYA5Q8N3K9 4069 aa3.6□□□□□ -1.83
CSMD2-206ENST00000373388 TRRAPQ9Y4A5 3859 aa3.59□□□□□ -1.83
CSMD2-206ENST00000373388 CSMD1Q96PZ7 3565 aa3.59□□□□□ -1.83
CSMD2-206ENST00000373388 DCHS1Q96JQ0 3298 aa3.58□□□□□ -1.84
CSMD2-206ENST00000373388 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
CSMD2-206ENST00000373388 SPENQ96T58 3664 aaKnown RBP3.58□□□□□ -1.84
CSMD2-206ENST00000373388 KRTAP12-2P59991 146 aa3.56□□□□□ -1.84
CSMD2-206ENST00000373388 DMDP11532 3685 aa3.55□□□□□ -1.84
CSMD2-206ENST00000373388 XP32Q5T750 250 aa3.55□□□□□ -1.84
CSMD2-206ENST00000373388 RELNP78509 3460 aa3.54□□□□□ -1.84
CSMD2-206ENST00000373388 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
CSMD2-206ENST00000373388 ZFHX4Q86UP3 3567 aa3.53□□□□□ -1.84
CSMD2-206ENST00000373388 ANK2Q01484 3957 aa3.52□□□□□ -1.85
CSMD2-206ENST00000373388 DNAH1Q9P2D7 4330 aa3.52□□□□□ -1.85
CSMD2-206ENST00000373388 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
CSMD2-206ENST00000373388 KRTAP21-3Q3LHN1 58 aa3.52□□□□□ -1.85
CSMD2-206ENST00000373388 DNAH3Q8TD57 4116 aa3.5□□□□□ -1.85
CSMD2-206ENST00000373388 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
CSMD2-206ENST00000373388 DNAH7Q8WXX0 4024 aa3.46□□□□□ -1.86
CSMD2-206ENST00000373388 CUBNO60494 3623 aa3.44□□□□□ -1.86
CSMD2-206ENST00000373388 ZNF469Q96JG9 3925 aaPredicted RBP3.44□□□□□ -1.86
CSMD2-206ENST00000373388 VPS13CQ709C8 3753 aa3.44□□□□□ -1.86
CSMD2-206ENST00000373388 SVEP1Q4LDE5 3571 aa3.43□□□□□ -1.86
CSMD2-206ENST00000373388 FRAS1Q86XX4 4008 aa3.43□□□□□ -1.86
CSMD2-206ENST00000373388 HECTD4Q9Y4D8 3996 aa3.37□□□□□ -1.87
CSMD2-206ENST00000373388 KRTAP10-10P60014 251 aa3.36□□□□□ -1.87
CSMD2-206ENST00000373388 DNAH6Q9C0G6 4158 aa3.34□□□□□ -1.87
CSMD2-206ENST00000373388 LYSTQ99698 3801 aa3.34□□□□□ -1.87
CSMD2-206ENST00000373388 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
CSMD2-206ENST00000373388 DNAH10Q8IVF4 4471 aa3.26□□□□□ -1.89
CSMD2-206ENST00000373388 VPS13BQ7Z7G8 4022 aa3.25□□□□□ -1.89
CSMD2-206ENST00000373388 CSMD3Q7Z407 3707 aa3.25□□□□□ -1.89
CSMD2-206ENST00000373388 KRTAP3-1Q9BYR8 98 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms