RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 MMP24-AS1A0A0U1RRL7 71 aa6.7□□□□□ -1.34
CSMD2-204ENST00000373380 LINC00472Q9H8W2 130 aa6.67□□□□□ -1.34
CSMD2-204ENST00000373380 HRES1P13985 223 aa6.66□□□□□ -1.34
CSMD2-204ENST00000373380 LUZP6Q538Z0 58 aa6.66□□□□□ -1.34
CSMD2-204ENST00000373380 SPRR1BP22528 89 aa6.62□□□□□ -1.35
CSMD2-204ENST00000373380 A0A1B0GU33 70 aa6.62□□□□□ -1.35
CSMD2-204ENST00000373380 KRTAP4-16G5E9R7 235 aaPredicted RBP6.59□□□□□ -1.35
CSMD2-204ENST00000373380 PLAC8Q9NZF1 115 aa6.59□□□□□ -1.35
CSMD2-204ENST00000373380 PANO1I0J062 215 aa6.57□□□□□ -1.36
CSMD2-204ENST00000373380 TENM3Q9P273 2699 aa6.54□□□□□ -1.36
CSMD2-204ENST00000373380 PDZD2O15018 2839 aa6.54□□□□□ -1.36
CSMD2-204ENST00000373380 Q5W150 140 aa6.53□□□□□ -1.36
CSMD2-204ENST00000373380 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
CSMD2-204ENST00000373380 J3QL48 77 aa6.51□□□□□ -1.37
CSMD2-204ENST00000373380 COX6B2Q6YFQ2 88 aa6.5□□□□□ -1.37
CSMD2-204ENST00000373380 KRTAP29-1A8MX34 341 aaPredicted RBP6.49□□□□□ -1.37
CSMD2-204ENST00000373380 DMAC1Q96GE9 116 aa6.48□□□□□ -1.37
CSMD2-204ENST00000373380 A8MU10 97 aa6.48□□□□□ -1.37
CSMD2-204ENST00000373380 KRTAP11-1Q8IUC1 163 aa6.48□□□□□ -1.37
CSMD2-204ENST00000373380 ZCCHC13Q8WW36 166 aaKnown RBP6.47□□□□□ -1.37
CSMD2-204ENST00000373380 VWFP04275 2813 aa6.47□□□□□ -1.37
CSMD2-204ENST00000373380 KRTAP10-2P60368 255 aa6.46□□□□□ -1.38
CSMD2-204ENST00000373380 KRTAP7-1Q8IUC3 87 aa6.46□□□□□ -1.38
CSMD2-204ENST00000373380 A0A0A0MQY5 61 aa6.46□□□□□ -1.38
CSMD2-204ENST00000373380 A0A087X002 238 aa6.44□□□□□ -1.38
CSMD2-204ENST00000373380 NOTCH2NLQ7Z3S9 236 aa6.44□□□□□ -1.38
CSMD2-204ENST00000373380 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
CSMD2-204ENST00000373380 TENM1Q9UKZ4 2725 aa6.42□□□□□ -1.38
CSMD2-204ENST00000373380 ADM2Q7Z4H4 148 aa6.41□□□□□ -1.38
CSMD2-204ENST00000373380 A6NN06 94 aa6.41□□□□□ -1.38
CSMD2-204ENST00000373380 LINC00483Q53H64 154 aa6.41□□□□□ -1.38
CSMD2-204ENST00000373380 Q6ZR54 194 aa6.39□□□□□ -1.39
CSMD2-204ENST00000373380 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
CSMD2-204ENST00000373380 ANK3Q12955 4377 aaKnown RBP6.38□□□□□ -1.39
CSMD2-204ENST00000373380 Q6ZSA8 131 aa6.37□□□□□ -1.39
CSMD2-204ENST00000373380 CAMK2N1Q7Z7J9 78 aa6.37□□□□□ -1.39
CSMD2-204ENST00000373380 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
CSMD2-204ENST00000373380 KRTAP16-1A8MUX0 517 aa6.35□□□□□ -1.39
CSMD2-204ENST00000373380 FBN1P35555 2871 aaKnown RBP6.35□□□□□ -1.39
CSMD2-204ENST00000373380 RPL37P61927 97 aaKnown RBP6.34□□□□□ -1.4
CSMD2-204ENST00000373380 ZNF469Q96JG9 3925 aaPredicted RBP6.33□□□□□ -1.4
CSMD2-204ENST00000373380 ROMO1P60602 79 aa6.33□□□□□ -1.4
CSMD2-204ENST00000373380 ASB16-AS1Q495Z4 193 aa6.33□□□□□ -1.4
CSMD2-204ENST00000373380 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
CSMD2-204ENST00000373380 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
CSMD2-204ENST00000373380 LCE6AA0A183 80 aa6.3□□□□□ -1.4
CSMD2-204ENST00000373380 AKAP9Q99996 3911 aa6.29□□□□□ -1.4
CSMD2-204ENST00000373380 NDUFAF8A1L188 74 aa6.26□□□□□ -1.41
CSMD2-204ENST00000373380 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
CSMD2-204ENST00000373380 H1FX-AS1Q4G0G2 97 aa6.25□□□□□ -1.41
CSMD2-204ENST00000373380 S4R3F8 94 aa6.25□□□□□ -1.41
CSMD2-204ENST00000373380 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
CSMD2-204ENST00000373380 KRTAP13-1Q8IUC0 172 aa6.24□□□□□ -1.41
CSMD2-204ENST00000373380 TGP01266 2768 aa6.22□□□□□ -1.41
CSMD2-204ENST00000373380 Q5VSD8 79 aa6.2□□□□□ -1.42
CSMD2-204ENST00000373380 KRTAP13-2Q52LG2 175 aa6.2□□□□□ -1.42
CSMD2-204ENST00000373380 R4GN34 69 aa6.2□□□□□ -1.42
CSMD2-204ENST00000373380 TENM2Q9NT68 2774 aa6.17□□□□□ -1.42
CSMD2-204ENST00000373380 SRRM2Q9UQ35 2752 aaKnown RBP6.17□□□□□ -1.42
CSMD2-204ENST00000373380 M0R2T5 61 aa6.09□□□□□ -1.43
CSMD2-204ENST00000373380 M0QZ58 72 aa6.08□□□□□ -1.44
CSMD2-204ENST00000373380 A8MUU9 505 aa6.06□□□□□ -1.44
CSMD2-204ENST00000373380 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
CSMD2-204ENST00000373380 RPS29P62273 56 aaKnown RBP6□□□□□ -1.45
CSMD2-204ENST00000373380 CSMD3Q7Z407 3707 aa5.97□□□□□ -1.45
CSMD2-204ENST00000373380 C20orf166-AS1Q96NR2 134 aa5.96□□□□□ -1.46
CSMD2-204ENST00000373380 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
CSMD2-204ENST00000373380 FBN3Q75N90 2809 aa5.93□□□□□ -1.46
CSMD2-204ENST00000373380 KRTAP1-4P0C5Y4 121 aa5.92□□□□□ -1.46
CSMD2-204ENST00000373380 C10orf95Q9H7T3 257 aa5.9□□□□□ -1.46
CSMD2-204ENST00000373380 HUWE1Q7Z6Z7 4374 aaKnown RBP5.85□□□□□ -1.47
CSMD2-204ENST00000373380 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
CSMD2-204ENST00000373380 H0YAA0 97 aa5.79□□□□□ -1.48
CSMD2-204ENST00000373380 MEGF8Q7Z7M0 2845 aa5.78□□□□□ -1.48
CSMD2-204ENST00000373380 XP32Q5T750 250 aa5.73□□□□□ -1.49
CSMD2-204ENST00000373380 P0C880 135 aa5.72□□□□□ -1.49
CSMD2-204ENST00000373380 KRTAP13-3Q3SY46 172 aa5.71□□□□□ -1.5
CSMD2-204ENST00000373380 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
CSMD2-204ENST00000373380 DNAH3Q8TD57 4116 aa5.65□□□□□ -1.5
CSMD2-204ENST00000373380 KRTAP10-8P60410 259 aa5.65□□□□□ -1.51
CSMD2-204ENST00000373380 TNP1P09430 55 aa5.64□□□□□ -1.51
CSMD2-204ENST00000373380 KRTAP21-3Q3LHN1 58 aa5.64□□□□□ -1.51
CSMD2-204ENST00000373380 ANK2Q01484 3957 aa5.63□□□□□ -1.51
CSMD2-204ENST00000373380 DNAH10Q8IVF4 4471 aa5.62□□□□□ -1.51
CSMD2-204ENST00000373380 CMYA5Q8N3K9 4069 aa5.6□□□□□ -1.51
CSMD2-204ENST00000373380 PLECQ15149 4684 aaKnown RBP5.6□□□□□ -1.51
CSMD2-204ENST00000373380 PP632Q6XCG6 107 aa5.56□□□□□ -1.52
CSMD2-204ENST00000373380 DNAH1Q9P2D7 4330 aa5.56□□□□□ -1.52
CSMD2-204ENST00000373380 A0A1B0GVY2 172 aa5.55□□□□□ -1.52
CSMD2-204ENST00000373380 VPS13DQ5THJ4 4388 aa5.52□□□□□ -1.53
CSMD2-204ENST00000373380 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
CSMD2-204ENST00000373380 LYSTQ99698 3801 aa5.49□□□□□ -1.53
CSMD2-204ENST00000373380 DNAH17Q9UFH2 4485 aa5.46□□□□□ -1.54
CSMD2-204ENST00000373380 STARD9Q9P2P6 4700 aa5.45□□□□□ -1.54
CSMD2-204ENST00000373380 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
CSMD2-204ENST00000373380 DYNC2H1Q8NCM8 4307 aaKnown RBP5.45□□□□□ -1.54
CSMD2-204ENST00000373380 KRTAP12-2P59991 146 aa5.39□□□□□ -1.55
CSMD2-204ENST00000373380 DNAH8Q96JB1 4490 aa5.38□□□□□ -1.55
CSMD2-204ENST00000373380 PRKDCP78527 4128 aaKnown RBP5.37□□□□□ -1.55
CSMD2-204ENST00000373380 DNAH11Q96DT5 4516 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms