RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 ZNF706Q9Y5V0 76 aaPredicted RBP14.14□□□□□ -0.15
CCND3-202ENST00000372988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.14□□□□□ -0.15
CCND3-202ENST00000372988 COL6A5A8TX70 2615 aa14.13□□□□□ -0.15
CCND3-202ENST00000372988 DNAH7Q8WXX0 4024 aa14.12□□□□□ -0.15
CCND3-202ENST00000372988 COL7A1Q02388 2944 aa14.11□□□□□ -0.15
CCND3-202ENST00000372988 Q6ZRN7 208 aaPredicted RBP14.08□□□□□ -0.16
CCND3-202ENST00000372988 DNAH8Q96JB1 4490 aa14.07□□□□□ -0.16
CCND3-202ENST00000372988 ACYP2P14621 99 aa14.07□□□□□ -0.16
CCND3-202ENST00000372988 ANAPC11Q9NYG5 84 aa14.06□□□□□ -0.16
CCND3-202ENST00000372988 NBDYA0A0U1RRE5 68 aa14.03□□□□□ -0.16
CCND3-202ENST00000372988 PSORS1C2Q9UIG4 136 aa14.01□□□□□ -0.17
CCND3-202ENST00000372988 IGLV5-52A0A0A0MRZ9 124 aa14□□□□□ -0.17
CCND3-202ENST00000372988 LINC00313P59037 77 aa13.99□□□□□ -0.17
CCND3-202ENST00000372988 DMAC1Q96GE9 116 aa13.99□□□□□ -0.17
CCND3-202ENST00000372988 PLECQ15149 4684 aaKnown RBP13.99□□□□□ -0.17
CCND3-202ENST00000372988 STAB2Q8WWQ8 2551 aa13.99□□□□□ -0.17
CCND3-202ENST00000372988 SPINK6Q6UWN8 80 aa13.97□□□□□ -0.17
CCND3-202ENST00000372988 FRAS1Q86XX4 4008 aa13.97□□□□□ -0.17
CCND3-202ENST00000372988 ZNF861PO60384 105 aa13.96□□□□□ -0.17
CCND3-202ENST00000372988 HECTD4Q9Y4D8 3996 aa13.95□□□□□ -0.18
CCND3-202ENST00000372988 C8orf87E5RJ46 101 aa13.9□□□□□ -0.18
CCND3-202ENST00000372988 PRAC1Q96KF2 57 aa13.89□□□□□ -0.19
CCND3-202ENST00000372988 PLA2G1BP04054 148 aaKnown RBP13.88□□□□□ -0.19
CCND3-202ENST00000372988 SPATA8Q6RVD6 105 aa13.87□□□□□ -0.19
CCND3-202ENST00000372988 A0A1B0GU69 56 aa13.86□□□□□ -0.19
CCND3-202ENST00000372988 A0A087WTM6 91 aa13.83□□□□□ -0.2
CCND3-202ENST00000372988 ADM2Q7Z4H4 148 aa13.82□□□□□ -0.2
CCND3-202ENST00000372988 CIRBP-AS1Q8TBR5 109 aa13.81□□□□□ -0.2
CCND3-202ENST00000372988 VPS13DQ5THJ4 4388 aa13.8□□□□□ -0.2
CCND3-202ENST00000372988 FAM229AH3BQW9 127 aa13.8□□□□□ -0.2
CCND3-202ENST00000372988 RTL8CO15255 209 aa13.79□□□□□ -0.2
CCND3-202ENST00000372988 DNAH17Q9UFH2 4485 aa13.79□□□□□ -0.2
CCND3-202ENST00000372988 IGKV2-30P06310 120 aa13.78□□□□□ -0.2
CCND3-202ENST00000372988 IGLV7-43P04211 117 aa13.72□□□□□ -0.21
CCND3-202ENST00000372988 MIR22HGQ0VDD5 57 aa13.72□□□□□ -0.21
CCND3-202ENST00000372988 SSBP3-AS1Q7Z2R9 100 aa13.72□□□□□ -0.21
CCND3-202ENST00000372988 RETNLBQ9BQ08 111 aa13.72□□□□□ -0.21
CCND3-202ENST00000372988 UQCR11O14957 56 aa13.69□□□□□ -0.22
CCND3-202ENST00000372988 NUPR2A6NF83 97 aa13.69□□□□□ -0.22
CCND3-202ENST00000372988 MGAM2Q2M2H8 2515 aa13.67□□□□□ -0.22
CCND3-202ENST00000372988 LINC01554Q52M75 96 aa13.64□□□□□ -0.23
CCND3-202ENST00000372988 DNAH2Q9P225 4427 aa13.64□□□□□ -0.23
CCND3-202ENST00000372988 STARD9Q9P2P6 4700 aa13.62□□□□□ -0.23
CCND3-202ENST00000372988 KRTAP16-1A8MUX0 517 aa13.61□□□□□ -0.23
CCND3-202ENST00000372988 PRKDCP78527 4128 aaKnown RBP13.57□□□□□ -0.24
CCND3-202ENST00000372988 FBN3Q75N90 2809 aa13.51□□□□□ -0.25
CCND3-202ENST00000372988 KMT2AQ03164 3969 aa13.49□□□□□ -0.25
CCND3-202ENST00000372988 IGKV2D-30A0A075B6S6 120 aa13.49□□□□□ -0.25
CCND3-202ENST00000372988 KRTAP13-2Q52LG2 175 aa13.48□□□□□ -0.25
CCND3-202ENST00000372988 DNAH11Q96DT5 4516 aa13.47□□□□□ -0.25
CCND3-202ENST00000372988 CSAG1Q6PB30 78 aa13.42□□□□□ -0.26
CCND3-202ENST00000372988 C4orf48Q5BLP8 95 aa13.39□□□□□ -0.27
CCND3-202ENST00000372988 MEGF8Q7Z7M0 2845 aa13.36□□□□□ -0.27
CCND3-202ENST00000372988 DNAH5Q8TE73 4624 aa13.34□□□□□ -0.27
CCND3-202ENST00000372988 DNAH6Q9C0G6 4158 aa13.34□□□□□ -0.27
CCND3-202ENST00000372988 C1orf134Q5TEV5 83 aa13.3□□□□□ -0.28
CCND3-202ENST00000372988 TGP01266 2768 aa13.28□□□□□ -0.28
CCND3-202ENST00000372988 SPINK1P00995 79 aa13.26□□□□□ -0.29
CCND3-202ENST00000372988 Q8N1X5 172 aa13.22□□□□□ -0.29
CCND3-202ENST00000372988 LY6G6CO95867 125 aa13.21□□□□□ -0.29
CCND3-202ENST00000372988 KRTAP1-4P0C5Y4 121 aa13.21□□□□□ -0.29
CCND3-202ENST00000372988 LRP1BQ9NZR2 4599 aa13.19□□□□□ -0.3
CCND3-202ENST00000372988 Q6ZSA8 131 aa13.18□□□□□ -0.3
CCND3-202ENST00000372988 KRTAP10-2P60368 255 aa13.17□□□□□ -0.3
CCND3-202ENST00000372988 H0YAA0 97 aa13.16□□□□□ -0.3
CCND3-202ENST00000372988 A8MUU9 505 aa13.15□□□□□ -0.3
CCND3-202ENST00000372988 H3BS24 57 aa13.09□□□□□ -0.31
CCND3-202ENST00000372988 TYMSOSQ8TAI1 123 aa13.06□□□□□ -0.32
CCND3-202ENST00000372988 LINC00304Q8N9R0 145 aa13.04□□□□□ -0.32
CCND3-202ENST00000372988 KRTAP25-1Q3LHN0 102 aa13.03□□□□□ -0.32
CCND3-202ENST00000372988 VPS13BQ7Z7G8 4022 aa13.02□□□□□ -0.32
CCND3-202ENST00000372988 PKD1P98161 4303 aa13.02□□□□□ -0.33
CCND3-202ENST00000372988 KRTAP10-1P60331 282 aa13.02□□□□□ -0.33
CCND3-202ENST00000372988 A0A1B0GU33 70 aa12.98□□□□□ -0.33
CCND3-202ENST00000372988 H1FX-AS1Q4G0G2 97 aa12.94□□□□□ -0.34
CCND3-202ENST00000372988 KRTAP3-1Q9BYR8 98 aa12.93□□□□□ -0.34
CCND3-202ENST00000372988 RPS29P62273 56 aaKnown RBP12.87□□□□□ -0.35
CCND3-202ENST00000372988 FAT2Q9NYQ8 4349 aa12.87□□□□□ -0.35
CCND3-202ENST00000372988 SACSQ9NZJ4 4579 aa12.83□□□□□ -0.36
CCND3-202ENST00000372988 C20orf166-AS1Q96NR2 134 aa12.82□□□□□ -0.36
CCND3-202ENST00000372988 ROMO1P60602 79 aa12.8□□□□□ -0.36
CCND3-202ENST00000372988 C9orf92A6NGG3 77 aa12.71□□□□□ -0.37
CCND3-202ENST00000372988 COX6B2Q6YFQ2 88 aa12.67□□□□□ -0.38
CCND3-202ENST00000372988 K7ERS5 55 aa12.66□□□□□ -0.38
CCND3-202ENST00000372988 HYDINQ4G0P3 5121 aa12.66□□□□□ -0.38
CCND3-202ENST00000372988 PKHD1L1Q86WI1 4243 aa12.63□□□□□ -0.39
CCND3-202ENST00000372988 CRIPTQ9P021 101 aa12.62□□□□□ -0.39
CCND3-202ENST00000372988 FLG2Q5D862 2391 aaPredicted RBP12.55□□□□□ -0.4
CCND3-202ENST00000372988 P0C880 135 aa12.46□□□□□ -0.41
CCND3-202ENST00000372988 APOBP04114 4563 aaKnown RBP12.43□□□□□ -0.42
CCND3-202ENST00000372988 KRTAP10-6P60371 365 aaPredicted RBP12.43□□□□□ -0.42
CCND3-202ENST00000372988 PKHD1P08F94 4074 aa12.42□□□□□ -0.42
CCND3-202ENST00000372988 RPL37P61927 97 aaKnown RBP12.41□□□□□ -0.42
CCND3-202ENST00000372988 KRTAP13-4Q3LI77 160 aa12.37□□□□□ -0.43
CCND3-202ENST00000372988 KRTAP3-3Q9BYR6 98 aa12.35□□□□□ -0.43
CCND3-202ENST00000372988 DNHD1Q96M86 4753 aa12.34□□□□□ -0.43
CCND3-202ENST00000372988 DYNC1H1Q14204 4646 aaKnown RBP12.31□□□□□ -0.44
CCND3-202ENST00000372988 SMR3BP02814 79 aaPredicted RBP12.31□□□□□ -0.44
CCND3-202ENST00000372988 TPRXLQ17RH7 258 aa12.31□□□□□ -0.44
CCND3-202ENST00000372988 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms