RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 STARD9Q9P2P6 4700 aa6.98□□□□□ -1.29
SMARCA1-201ENST00000371121 Q5W150 140 aa6.98□□□□□ -1.29
SMARCA1-201ENST00000371121 C8orf17Q9NRJ1 99 aa6.98□□□□□ -1.29
SMARCA1-201ENST00000371121 DNAH6Q9C0G6 4158 aa6.97□□□□□ -1.29
SMARCA1-201ENST00000371121 STAB1Q9NY15 2570 aa6.97□□□□□ -1.29
SMARCA1-201ENST00000371121 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
SMARCA1-201ENST00000371121 A0A1B0GVX0 72 aa6.91□□□□□ -1.3
SMARCA1-201ENST00000371121 IGHV6-1A0A0B4J1U7 121 aa6.9□□□□□ -1.3
SMARCA1-201ENST00000371121 RTL8CO15255 209 aa6.9□□□□□ -1.31
SMARCA1-201ENST00000371121 DNAH11Q96DT5 4516 aa6.89□□□□□ -1.31
SMARCA1-201ENST00000371121 IGLV9-49A0A0B4J1Y8 123 aa6.88□□□□□ -1.31
SMARCA1-201ENST00000371121 PLA2G1BP04054 148 aaKnown RBP6.88□□□□□ -1.31
SMARCA1-201ENST00000371121 MRPL34Q9BQ48 92 aaKnown RBP6.88□□□□□ -1.31
SMARCA1-201ENST00000371121 STAB2Q8WWQ8 2551 aa6.87□□□□□ -1.31
SMARCA1-201ENST00000371121 LINC00483Q53H64 154 aa6.87□□□□□ -1.31
SMARCA1-201ENST00000371121 MDFIQ99750 246 aa6.86□□□□□ -1.31
SMARCA1-201ENST00000371121 WWC2-AS2Q96NR7 200 aa6.86□□□□□ -1.31
SMARCA1-201ENST00000371121 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
SMARCA1-201ENST00000371121 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
SMARCA1-201ENST00000371121 DNAH5Q8TE73 4624 aa6.82□□□□□ -1.32
SMARCA1-201ENST00000371121 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
SMARCA1-201ENST00000371121 SPATA8Q6RVD6 105 aa6.81□□□□□ -1.32
SMARCA1-201ENST00000371121 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
SMARCA1-201ENST00000371121 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
SMARCA1-201ENST00000371121 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
SMARCA1-201ENST00000371121 Q6ZRN7 208 aaPredicted RBP6.76□□□□□ -1.33
SMARCA1-201ENST00000371121 SPACA4Q8TDM5 124 aa6.75□□□□□ -1.33
SMARCA1-201ENST00000371121 TGP01266 2768 aa6.74□□□□□ -1.33
SMARCA1-201ENST00000371121 ACYP2P14621 99 aa6.74□□□□□ -1.33
SMARCA1-201ENST00000371121 LRP1BQ9NZR2 4599 aa6.74□□□□□ -1.33
SMARCA1-201ENST00000371121 PKD1P98161 4303 aa6.72□□□□□ -1.33
SMARCA1-201ENST00000371121 VPS13BQ7Z7G8 4022 aa6.7□□□□□ -1.34
SMARCA1-201ENST00000371121 KRTAP24-1Q3LI83 254 aa6.7□□□□□ -1.34
SMARCA1-201ENST00000371121 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
SMARCA1-201ENST00000371121 PSORS1C2Q9UIG4 136 aa6.7□□□□□ -1.34
SMARCA1-201ENST00000371121 A0A1B0GU69 56 aa6.69□□□□□ -1.34
SMARCA1-201ENST00000371121 APLNQ9ULZ1 77 aa6.69□□□□□ -1.34
SMARCA1-201ENST00000371121 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
SMARCA1-201ENST00000371121 H3BS24 57 aa6.68□□□□□ -1.34
SMARCA1-201ENST00000371121 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
SMARCA1-201ENST00000371121 ZNF861PO60384 105 aa6.67□□□□□ -1.34
SMARCA1-201ENST00000371121 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
SMARCA1-201ENST00000371121 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
SMARCA1-201ENST00000371121 KRTAP16-1A8MUX0 517 aa6.66□□□□□ -1.34
SMARCA1-201ENST00000371121 IGKV2-30P06310 120 aa6.65□□□□□ -1.34
SMARCA1-201ENST00000371121 CDK2AP2O75956 126 aa6.63□□□□□ -1.35
SMARCA1-201ENST00000371121 C14orf177Q52M58 125 aa6.63□□□□□ -1.35
SMARCA1-201ENST00000371121 J3QKU1 62 aa6.62□□□□□ -1.35
SMARCA1-201ENST00000371121 UQCR11O14957 56 aa6.61□□□□□ -1.35
SMARCA1-201ENST00000371121 HYDINQ4G0P3 5121 aa6.59□□□□□ -1.35
SMARCA1-201ENST00000371121 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
SMARCA1-201ENST00000371121 IGLV7-43P04211 117 aa6.57□□□□□ -1.36
SMARCA1-201ENST00000371121 CIRBP-AS1Q8TBR5 109 aa6.56□□□□□ -1.36
SMARCA1-201ENST00000371121 ZNF706Q9Y5V0 76 aaPredicted RBP6.56□□□□□ -1.36
SMARCA1-201ENST00000371121 MGAM2Q2M2H8 2515 aa6.56□□□□□ -1.36
SMARCA1-201ENST00000371121 H0YAA0 97 aa6.55□□□□□ -1.36
SMARCA1-201ENST00000371121 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
SMARCA1-201ENST00000371121 UBE2DNLQ8IWF7 75 aa6.54□□□□□ -1.36
SMARCA1-201ENST00000371121 FAM229AH3BQW9 127 aa6.54□□□□□ -1.36
SMARCA1-201ENST00000371121 A8MUU9 505 aa6.53□□□□□ -1.36
SMARCA1-201ENST00000371121 KRTAP13-2Q52LG2 175 aa6.53□□□□□ -1.36
SMARCA1-201ENST00000371121 Q6ZSA8 131 aa6.52□□□□□ -1.37
SMARCA1-201ENST00000371121 A0A087WTM6 91 aa6.52□□□□□ -1.37
SMARCA1-201ENST00000371121 IGKV2D-30A0A075B6S6 120 aa6.5□□□□□ -1.37
SMARCA1-201ENST00000371121 LINC00304Q8N9R0 145 aa6.49□□□□□ -1.37
SMARCA1-201ENST00000371121 TYMSOSQ8TAI1 123 aa6.47□□□□□ -1.37
SMARCA1-201ENST00000371121 KRTAP25-1Q3LHN0 102 aa6.44□□□□□ -1.38
SMARCA1-201ENST00000371121 C1orf134Q5TEV5 83 aa6.44□□□□□ -1.38
SMARCA1-201ENST00000371121 Q8N1X5 172 aa6.43□□□□□ -1.38
SMARCA1-201ENST00000371121 SACSQ9NZJ4 4579 aa6.42□□□□□ -1.38
SMARCA1-201ENST00000371121 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
SMARCA1-201ENST00000371121 SSBP3-AS1Q7Z2R9 100 aa6.42□□□□□ -1.38
SMARCA1-201ENST00000371121 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
SMARCA1-201ENST00000371121 ROMO1P60602 79 aa6.41□□□□□ -1.38
SMARCA1-201ENST00000371121 SPINK1P00995 79 aa6.41□□□□□ -1.38
SMARCA1-201ENST00000371121 P0C880 135 aa6.4□□□□□ -1.38
SMARCA1-201ENST00000371121 KRTAP1-4P0C5Y4 121 aa6.38□□□□□ -1.39
SMARCA1-201ENST00000371121 LY6G6CO95867 125 aa6.38□□□□□ -1.39
SMARCA1-201ENST00000371121 FLG2Q5D862 2391 aaPredicted RBP6.36□□□□□ -1.39
SMARCA1-201ENST00000371121 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
SMARCA1-201ENST00000371121 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
SMARCA1-201ENST00000371121 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
SMARCA1-201ENST00000371121 DNHD1Q96M86 4753 aa6.29□□□□□ -1.4
SMARCA1-201ENST00000371121 NUPR2A6NF83 97 aa6.27□□□□□ -1.41
SMARCA1-201ENST00000371121 H1FX-AS1Q4G0G2 97 aa6.27□□□□□ -1.41
SMARCA1-201ENST00000371121 HSPG2P98160 4391 aa6.26□□□□□ -1.41
SMARCA1-201ENST00000371121 A0A1B0GU33 70 aa6.26□□□□□ -1.41
SMARCA1-201ENST00000371121 KRTAP21-3Q3LHN1 58 aa6.24□□□□□ -1.41
SMARCA1-201ENST00000371121 FAT1Q14517 4588 aa6.21□□□□□ -1.42
SMARCA1-201ENST00000371121 COX6B2Q6YFQ2 88 aa6.2□□□□□ -1.42
SMARCA1-201ENST00000371121 TPRXLQ17RH7 258 aa6.19□□□□□ -1.42
SMARCA1-201ENST00000371121 KRTAP13-4Q3LI77 160 aa6.19□□□□□ -1.42
SMARCA1-201ENST00000371121 TNXBP22105 4242 aa6.19□□□□□ -1.42
SMARCA1-201ENST00000371121 KRTAP10-1P60331 282 aa6.19□□□□□ -1.42
SMARCA1-201ENST00000371121 DYNC1H1Q14204 4646 aaKnown RBP6.18□□□□□ -1.42
SMARCA1-201ENST00000371121 LRP1Q07954 4544 aaKnown RBP6.15□□□□□ -1.43
SMARCA1-201ENST00000371121 KRTAP10-6P60371 365 aaPredicted RBP6.14□□□□□ -1.43
SMARCA1-201ENST00000371121 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
SMARCA1-201ENST00000371121 LPAP08519 4548 aa6.14□□□□□ -1.43
SMARCA1-201ENST00000371121 C20orf166-AS1Q96NR2 134 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms