RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.72
CSDE1-204ENST00000369530 LINC01556Q5JQF7 62 aa4.33□□□□□ -1.72
CSDE1-204ENST00000369530 SPTSSBQ8NFR3 76 aa4.33□□□□□ -1.72
CSDE1-204ENST00000369530 A6NED7 52 aa4.32□□□□□ -1.72
CSDE1-204ENST00000369530 ST20-AS1Q8NBB2 130 aa4.32□□□□□ -1.72
CSDE1-204ENST00000369530 SPRR4Q96PI1 79 aa4.32□□□□□ -1.72
CSDE1-204ENST00000369530 GVQW2A0A096LPI5 108 aaPredicted RBP4.31□□□□□ -1.72
CSDE1-204ENST00000369530 DSCR10P59022 87 aa4.31□□□□□ -1.72
CSDE1-204ENST00000369530 C6orf48Q9UBA6 75 aa4.31□□□□□ -1.72
CSDE1-204ENST00000369530 TNP2Q05952 138 aa4.3□□□□□ -1.72
CSDE1-204ENST00000369530 LINC00528Q8N1L1 170 aa4.3□□□□□ -1.72
CSDE1-204ENST00000369530 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
CSDE1-204ENST00000369530 IGLV7-46A0A075B6I9 117 aa4.3□□□□□ -1.72
CSDE1-204ENST00000369530 IGKV2-24A0A0C4DH68 120 aa4.3□□□□□ -1.72
CSDE1-204ENST00000369530 KRTAP29-1A8MX34 341 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-204ENST00000369530 CASC2Q6XLA1 102 aa4.29□□□□□ -1.72
CSDE1-204ENST00000369530 FLGP20930 4061 aaPredicted RBP4.29□□□□□ -1.72
CSDE1-204ENST00000369530 MP68P56378 58 aa4.28□□□□□ -1.72
CSDE1-204ENST00000369530 COA5Q86WW8 74 aa4.27□□□□□ -1.73
CSDE1-204ENST00000369530 RPL37AP8A6NKH3 93 aa4.27□□□□□ -1.73
CSDE1-204ENST00000369530 H0Y9J4 135 aa4.27□□□□□ -1.73
CSDE1-204ENST00000369530 DEFB105AQ8NG35 78 aa4.27□□□□□ -1.73
CSDE1-204ENST00000369530 C15orf56Q8N910 161 aa4.26□□□□□ -1.73
CSDE1-204ENST00000369530 KRTAP10-1P60331 282 aa4.26□□□□□ -1.73
CSDE1-204ENST00000369530 A0A1W2PNM2 257 aa4.25□□□□□ -1.73
CSDE1-204ENST00000369530 Q8N1X5 172 aa4.25□□□□□ -1.73
CSDE1-204ENST00000369530 Q8NBF4 154 aa4.25□□□□□ -1.73
CSDE1-204ENST00000369530 A0A087WTM6 91 aa4.25□□□□□ -1.73
CSDE1-204ENST00000369530 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
CSDE1-204ENST00000369530 KRTAP7-1Q8IUC3 87 aa4.24□□□□□ -1.73
CSDE1-204ENST00000369530 SPINK7P58062 85 aa4.24□□□□□ -1.73
CSDE1-204ENST00000369530 K7EQZ3 153 aa4.24□□□□□ -1.73
CSDE1-204ENST00000369530 NOTCH2NLQ7Z3S9 236 aa4.23□□□□□ -1.73
CSDE1-204ENST00000369530 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
CSDE1-204ENST00000369530 ZNF706Q9Y5V0 76 aaPredicted RBP4.23□□□□□ -1.73
CSDE1-204ENST00000369530 Q8N377 158 aa4.22□□□□□ -1.73
CSDE1-204ENST00000369530 FAM168BA1KXE4 195 aa4.22□□□□□ -1.73
CSDE1-204ENST00000369530 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
CSDE1-204ENST00000369530 PRR4Q16378 134 aa4.21□□□□□ -1.74
CSDE1-204ENST00000369530 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
CSDE1-204ENST00000369530 PANO1I0J062 215 aa4.2□□□□□ -1.74
CSDE1-204ENST00000369530 LY6G6CO95867 125 aa4.2□□□□□ -1.74
CSDE1-204ENST00000369530 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
CSDE1-204ENST00000369530 C7orf33Q8WU49 177 aa4.2□□□□□ -1.74
CSDE1-204ENST00000369530 H0Y9P7 68 aa4.19□□□□□ -1.74
CSDE1-204ENST00000369530 SPATA8Q6RVD6 105 aa4.19□□□□□ -1.74
CSDE1-204ENST00000369530 CHTF8P0CG12 524 aa4.18□□□□□ -1.74
CSDE1-204ENST00000369530 IGLV1-50A0A075B6I6 118 aa4.18□□□□□ -1.74
CSDE1-204ENST00000369530 LRP2P98164 4655 aa4.18□□□□□ -1.74
CSDE1-204ENST00000369530 FAM229AH3BQW9 127 aa4.18□□□□□ -1.74
CSDE1-204ENST00000369530 C14orf177Q52M58 125 aa4.18□□□□□ -1.74
CSDE1-204ENST00000369530 C1orf134Q5TEV5 83 aa4.18□□□□□ -1.74
CSDE1-204ENST00000369530 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
CSDE1-204ENST00000369530 IGLV8-61A0A075B6I0 122 aa4.17□□□□□ -1.74
CSDE1-204ENST00000369530 KRTAP4-16G5E9R7 235 aaPredicted RBP4.16□□□□□ -1.74
CSDE1-204ENST00000369530 RETNLBQ9BQ08 111 aa4.16□□□□□ -1.74
CSDE1-204ENST00000369530 A0A096LNI7 61 aa4.16□□□□□ -1.74
CSDE1-204ENST00000369530 C1orf137Q5JT78 98 aa4.15□□□□□ -1.74
CSDE1-204ENST00000369530 SPACA4Q8TDM5 124 aa4.15□□□□□ -1.74
CSDE1-204ENST00000369530 DHRS4-AS1Q9P1J3 65 aa4.15□□□□□ -1.74
CSDE1-204ENST00000369530 PRLHP81277 87 aa4.15□□□□□ -1.74
CSDE1-204ENST00000369530 SPRR1AP35321 89 aa4.15□□□□□ -1.75
CSDE1-204ENST00000369530 MUC2Q02817 5179 aa4.15□□□□□ -1.75
CSDE1-204ENST00000369530 IGHV6-1A0A0B4J1U7 121 aa4.14□□□□□ -1.75
CSDE1-204ENST00000369530 HRES1P13985 223 aa4.13□□□□□ -1.75
CSDE1-204ENST00000369530 A0A1W2PNN7 141 aa4.12□□□□□ -1.75
CSDE1-204ENST00000369530 SPAG11AQ6PDA7 123 aa4.12□□□□□ -1.75
CSDE1-204ENST00000369530 TLX1NBP0CAT3 122 aa4.12□□□□□ -1.75
CSDE1-204ENST00000369530 KRTAP10-8P60410 259 aa4.11□□□□□ -1.75
CSDE1-204ENST00000369530 Q6ZRX8 168 aa4.11□□□□□ -1.75
CSDE1-204ENST00000369530 KRTAP11-1Q8IUC1 163 aa4.11□□□□□ -1.75
CSDE1-204ENST00000369530 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
CSDE1-204ENST00000369530 TP53AIP1Q9HCN2 124 aa4.11□□□□□ -1.75
CSDE1-204ENST00000369530 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.75
CSDE1-204ENST00000369530 A8MWP4 228 aa4.09□□□□□ -1.75
CSDE1-204ENST00000369530 ROMO1P60602 79 aa4.09□□□□□ -1.75
CSDE1-204ENST00000369530 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-204ENST00000369530 CSAG1Q6PB30 78 aa4.08□□□□□ -1.76
CSDE1-204ENST00000369530 A0A0G2JQZ4 141 aa4.08□□□□□ -1.76
CSDE1-204ENST00000369530 LINC00472Q9H8W2 130 aa4.08□□□□□ -1.76
CSDE1-204ENST00000369530 MMP24-AS1A0A0U1RRL7 71 aa4.07□□□□□ -1.76
CSDE1-204ENST00000369530 ZNF861PO60384 105 aa4.07□□□□□ -1.76
CSDE1-204ENST00000369530 KRTAP1-4P0C5Y4 121 aa4.07□□□□□ -1.76
CSDE1-204ENST00000369530 WFDC13Q8IUB5 93 aa4.07□□□□□ -1.76
CSDE1-204ENST00000369530 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
CSDE1-204ENST00000369530 IGLV9-49A0A0B4J1Y8 123 aa4.05□□□□□ -1.76
CSDE1-204ENST00000369530 IGFL1Q6UW32 110 aa4.05□□□□□ -1.76
CSDE1-204ENST00000369530 DEFB116Q30KQ4 102 aa4.05□□□□□ -1.76
CSDE1-204ENST00000369530 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
CSDE1-204ENST00000369530 A0A087WSZ3 146 aa4.03□□□□□ -1.76
CSDE1-204ENST00000369530 KRTAP25-1Q3LHN0 102 aa4.03□□□□□ -1.76
CSDE1-204ENST00000369530 Q5VSD8 79 aa4.03□□□□□ -1.76
CSDE1-204ENST00000369530 KRTAP13-3Q3SY46 172 aa4.02□□□□□ -1.77
CSDE1-204ENST00000369530 SPRR1BP22528 89 aa4.01□□□□□ -1.77
CSDE1-204ENST00000369530 MIR22HGQ0VDD5 57 aa4.01□□□□□ -1.77
CSDE1-204ENST00000369530 ANAPC11Q9NYG5 84 aa4.01□□□□□ -1.77
CSDE1-204ENST00000369530 UQCR11O14957 56 aa4□□□□□ -1.77
CSDE1-204ENST00000369530 DMAC1Q96GE9 116 aa4□□□□□ -1.77
CSDE1-204ENST00000369530 PSORS1C2Q9UIG4 136 aa3.99□□□□□ -1.77
CSDE1-204ENST00000369530 P0C880 135 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms