RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 C1orf137Q5JT78 98 aa7.38□□□□□ -1.23
USF1-203ENST00000368021 Q75L30 129 aa7.38□□□□□ -1.23
USF1-203ENST00000368021 ASB16-AS1Q495Z4 193 aa7.38□□□□□ -1.23
USF1-203ENST00000368021 DEFB105AQ8NG35 78 aa7.38□□□□□ -1.23
USF1-203ENST00000368021 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
USF1-203ENST00000368021 Q8N1X5 172 aa7.37□□□□□ -1.23
USF1-203ENST00000368021 PSPHP1O15172 72 aa7.36□□□□□ -1.23
USF1-203ENST00000368021 ZNF861PO60384 105 aa7.36□□□□□ -1.23
USF1-203ENST00000368021 Q5VV11 94 aa7.36□□□□□ -1.23
USF1-203ENST00000368021 CDC42SE1Q9NRR8 79 aa7.36□□□□□ -1.23
USF1-203ENST00000368021 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
USF1-203ENST00000368021 VPS13BQ7Z7G8 4022 aa7.35□□□□□ -1.23
USF1-203ENST00000368021 LOC101927531A0A1B0GV80 90 aa7.34□□□□□ -1.23
USF1-203ENST00000368021 A6NN06 94 aa7.34□□□□□ -1.23
USF1-203ENST00000368021 IGLV7-43P04211 117 aa7.34□□□□□ -1.23
USF1-203ENST00000368021 SPRR1BP22528 89 aa7.34□□□□□ -1.23
USF1-203ENST00000368021 Q5VSD8 79 aa7.34□□□□□ -1.24
USF1-203ENST00000368021 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
USF1-203ENST00000368021 A8MUN3 132 aa7.32□□□□□ -1.24
USF1-203ENST00000368021 MP68P56378 58 aa7.32□□□□□ -1.24
USF1-203ENST00000368021 SMIM29Q86T20 159 aa7.32□□□□□ -1.24
USF1-203ENST00000368021 ZNF706Q9Y5V0 76 aaPredicted RBP7.31□□□□□ -1.24
USF1-203ENST00000368021 FAM229AH3BQW9 127 aa7.31□□□□□ -1.24
USF1-203ENST00000368021 SPRR4Q96PI1 79 aa7.3□□□□□ -1.24
USF1-203ENST00000368021 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
USF1-203ENST00000368021 LINC00208Q96KT6 92 aa7.29□□□□□ -1.24
USF1-203ENST00000368021 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
USF1-203ENST00000368021 Q8N9P0 234 aaPredicted RBP7.29□□□□□ -1.24
USF1-203ENST00000368021 MYCBP2O75592 4640 aa7.28□□□□□ -1.24
USF1-203ENST00000368021 IGLV8-61A0A075B6I0 122 aa7.28□□□□□ -1.24
USF1-203ENST00000368021 A6NED7 52 aa7.27□□□□□ -1.25
USF1-203ENST00000368021 SPTSSBQ8NFR3 76 aa7.26□□□□□ -1.25
USF1-203ENST00000368021 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
USF1-203ENST00000368021 PLA2G1BP04054 148 aaKnown RBP7.24□□□□□ -1.25
USF1-203ENST00000368021 RPL37AP61513 92 aaKnown RBP7.24□□□□□ -1.25
USF1-203ENST00000368021 PRR15LQ9BU68 103 aa7.24□□□□□ -1.25
USF1-203ENST00000368021 IGFL1Q6UW32 110 aa7.21□□□□□ -1.26
USF1-203ENST00000368021 Q8NBF4 154 aa7.21□□□□□ -1.26
USF1-203ENST00000368021 A0A1W2PNM2 257 aa7.2□□□□□ -1.26
USF1-203ENST00000368021 CASC2Q6XLA1 102 aa7.2□□□□□ -1.26
USF1-203ENST00000368021 KRTAP10-4P60372 401 aaPredicted RBP7.2□□□□□ -1.26
USF1-203ENST00000368021 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
USF1-203ENST00000368021 SPINK6Q6UWN8 80 aa7.18□□□□□ -1.26
USF1-203ENST00000368021 LINC01558Q9Y6Z2 57 aa7.18□□□□□ -1.26
USF1-203ENST00000368021 IGLV9-49A0A0B4J1Y8 123 aa7.17□□□□□ -1.26
USF1-203ENST00000368021 ANAPC11Q9NYG5 84 aa7.17□□□□□ -1.26
USF1-203ENST00000368021 H3BS24 57 aa7.17□□□□□ -1.26
USF1-203ENST00000368021 HERC1Q15751 4861 aa7.16□□□□□ -1.26
USF1-203ENST00000368021 A0A0G2JQZ4 141 aa7.15□□□□□ -1.27
USF1-203ENST00000368021 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.27
USF1-203ENST00000368021 MOBPQ13875 183 aa7.15□□□□□ -1.27
USF1-203ENST00000368021 Q8N9L7 120 aa7.15□□□□□ -1.27
USF1-203ENST00000368021 LINC01554Q52M75 96 aa7.14□□□□□ -1.27
USF1-203ENST00000368021 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
USF1-203ENST00000368021 FAT3Q8TDW7 4589 aa7.12□□□□□ -1.27
USF1-203ENST00000368021 PKHD1L1Q86WI1 4243 aa7.1□□□□□ -1.27
USF1-203ENST00000368021 IGLV7-46A0A075B6I9 117 aa7.1□□□□□ -1.27
USF1-203ENST00000368021 A0A087WSZ3 146 aa7.1□□□□□ -1.27
USF1-203ENST00000368021 KRTAP13-2Q52LG2 175 aa7.09□□□□□ -1.27
USF1-203ENST00000368021 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
USF1-203ENST00000368021 COA5Q86WW8 74 aa7.07□□□□□ -1.28
USF1-203ENST00000368021 DSCR10P59022 87 aa7.06□□□□□ -1.28
USF1-203ENST00000368021 H0Y9P7 68 aa7.06□□□□□ -1.28
USF1-203ENST00000368021 J3QL48 77 aa7.05□□□□□ -1.28
USF1-203ENST00000368021 K7EQZ3 153 aa7.02□□□□□ -1.29
USF1-203ENST00000368021 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.29
USF1-203ENST00000368021 KRTAP29-1A8MX34 341 aaPredicted RBP7.01□□□□□ -1.29
USF1-203ENST00000368021 LINC00313P59037 77 aa7.01□□□□□ -1.29
USF1-203ENST00000368021 PRR4Q16378 134 aa7.01□□□□□ -1.29
USF1-203ENST00000368021 LINC00472Q9H8W2 130 aa7.01□□□□□ -1.29
USF1-203ENST00000368021 A8MU10 97 aa7.01□□□□□ -1.29
USF1-203ENST00000368021 PRR26Q8N8Z3 221 aa7.01□□□□□ -1.29
USF1-203ENST00000368021 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
USF1-203ENST00000368021 RETNLBQ9BQ08 111 aa6.99□□□□□ -1.29
USF1-203ENST00000368021 TNXBP22105 4242 aa6.99□□□□□ -1.29
USF1-203ENST00000368021 Q96NJ1 140 aa6.97□□□□□ -1.29
USF1-203ENST00000368021 SPINK1P00995 79 aa6.97□□□□□ -1.29
USF1-203ENST00000368021 SPAG11AQ6PDA7 123 aa6.96□□□□□ -1.3
USF1-203ENST00000368021 RPS29P62273 56 aaKnown RBP6.95□□□□□ -1.3
USF1-203ENST00000368021 DEFB116Q30KQ4 102 aa6.95□□□□□ -1.3
USF1-203ENST00000368021 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
USF1-203ENST00000368021 LINC00304Q8N9R0 145 aa6.94□□□□□ -1.3
USF1-203ENST00000368021 A8MWP4 228 aa6.93□□□□□ -1.3
USF1-203ENST00000368021 WFDC13Q8IUB5 93 aa6.89□□□□□ -1.31
USF1-203ENST00000368021 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
USF1-203ENST00000368021 HMCN2Q8NDA2 5059 aa6.87□□□□□ -1.31
USF1-203ENST00000368021 SPINK7P58062 85 aa6.87□□□□□ -1.31
USF1-203ENST00000368021 A0A1B0GVX0 72 aa6.85□□□□□ -1.31
USF1-203ENST00000368021 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
USF1-203ENST00000368021 IGHV6-1A0A0B4J1U7 121 aa6.81□□□□□ -1.32
USF1-203ENST00000368021 NOTCH2NLQ7Z3S9 236 aa6.81□□□□□ -1.32
USF1-203ENST00000368021 MMP24-AS1A0A0U1RRL7 71 aa6.8□□□□□ -1.32
USF1-203ENST00000368021 C8orf17Q9NRJ1 99 aa6.8□□□□□ -1.32
USF1-203ENST00000368021 ACYP2P14621 99 aa6.79□□□□□ -1.32
USF1-203ENST00000368021 UQCR11O14957 56 aa6.78□□□□□ -1.32
USF1-203ENST00000368021 HRES1P13985 223 aa6.78□□□□□ -1.32
USF1-203ENST00000368021 PRAC1Q96KF2 57 aa6.78□□□□□ -1.32
USF1-203ENST00000368021 LRP2P98164 4655 aa6.76□□□□□ -1.33
USF1-203ENST00000368021 UBR4Q5T4S7 5183 aa6.75□□□□□ -1.33
USF1-203ENST00000368021 A0A1B0GU69 56 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms