RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 CD164Q04900 197 aa5.5□□□□□ -1.53
VTA1-201ENST00000367621 HRCT1Q6UXD1 115 aa5.5□□□□□ -1.53
VTA1-201ENST00000367621 LINC00643Q86TS7 51 aa5.5□□□□□ -1.53
VTA1-201ENST00000367621 UBL5Q9BZL1 73 aa5.49□□□□□ -1.53
VTA1-201ENST00000367621 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
VTA1-201ENST00000367621 NREPQ16612 68 aa5.48□□□□□ -1.53
VTA1-201ENST00000367621 TYMSOSQ8TAI1 123 aa5.48□□□□□ -1.53
VTA1-201ENST00000367621 KRTAP10-8P60410 259 aa5.47□□□□□ -1.53
VTA1-201ENST00000367621 Q96NJ1 140 aa5.47□□□□□ -1.53
VTA1-201ENST00000367621 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
VTA1-201ENST00000367621 MYCBP2O75592 4640 aa5.47□□□□□ -1.53
VTA1-201ENST00000367621 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.54
VTA1-201ENST00000367621 SIGMAR1Q99720 223 aa5.46□□□□□ -1.54
VTA1-201ENST00000367621 Q5XG85 94 aa5.45□□□□□ -1.54
VTA1-201ENST00000367621 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 DSCR10P59022 87 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 CXCL6P80162 114 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 DEFB116Q30KQ4 102 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 ATP5EP2Q5VTU8 51 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
VTA1-201ENST00000367621 FLG2Q5D862 2391 aaPredicted RBP5.41□□□□□ -1.54
VTA1-201ENST00000367621 BPY2O14599 106 aa5.41□□□□□ -1.54
VTA1-201ENST00000367621 SPINK1P00995 79 aa5.41□□□□□ -1.54
VTA1-201ENST00000367621 SS18L2Q9UHA2 77 aa5.41□□□□□ -1.54
VTA1-201ENST00000367621 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.54
VTA1-201ENST00000367621 C1orf195Q5TG92 126 aa5.4□□□□□ -1.54
VTA1-201ENST00000367621 SPAG11AQ6PDA7 123 aa5.4□□□□□ -1.54
VTA1-201ENST00000367621 Q8N9L7 120 aa5.4□□□□□ -1.54
VTA1-201ENST00000367621 IMUPQ9GZP8 106 aa5.4□□□□□ -1.54
VTA1-201ENST00000367621 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
VTA1-201ENST00000367621 SEC61BP60468 96 aaKnown RBP5.39□□□□□ -1.55
VTA1-201ENST00000367621 A0A087WVE0 104 aa5.38□□□□□ -1.55
VTA1-201ENST00000367621 J3KT08 172 aa5.37□□□□□ -1.55
VTA1-201ENST00000367621 K7EQZ3 153 aa5.37□□□□□ -1.55
VTA1-201ENST00000367621 A8MWP4 228 aa5.36□□□□□ -1.55
VTA1-201ENST00000367621 OXTP01178 125 aa5.36□□□□□ -1.55
VTA1-201ENST00000367621 LIMD2Q9BT23 127 aa5.36□□□□□ -1.55
VTA1-201ENST00000367621 HIST1H4AP62805 103 aaKnown RBP5.35□□□□□ -1.55
VTA1-201ENST00000367621 PRR15Q8IV56 129 aa5.35□□□□□ -1.55
VTA1-201ENST00000367621 MPLKIPQ8TAP9 179 aa5.35□□□□□ -1.55
VTA1-201ENST00000367621 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.55
VTA1-201ENST00000367621 A0A1B0GVX0 72 aa5.32□□□□□ -1.56
VTA1-201ENST00000367621 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
VTA1-201ENST00000367621 Q75L30 129 aa5.32□□□□□ -1.56
VTA1-201ENST00000367621 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
VTA1-201ENST00000367621 MMP24-AS1A0A0U1RRL7 71 aa5.3□□□□□ -1.56
VTA1-201ENST00000367621 FAM236AA0A1B0GUQ0 79 aa5.3□□□□□ -1.56
VTA1-201ENST00000367621 FAM236BA0A1B0GV22 79 aa5.3□□□□□ -1.56
VTA1-201ENST00000367621 HERC1Q15751 4861 aa5.29□□□□□ -1.56
VTA1-201ENST00000367621 IGHV6-1A0A0B4J1U7 121 aa5.29□□□□□ -1.56
VTA1-201ENST00000367621 NDUFB1O75438 58 aa5.29□□□□□ -1.56
VTA1-201ENST00000367621 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
VTA1-201ENST00000367621 C8orf17Q9NRJ1 99 aa5.29□□□□□ -1.56
VTA1-201ENST00000367621 DMBT1Q9UGM3 2413 aaPredicted RBP5.28□□□□□ -1.56
VTA1-201ENST00000367621 HCG22E2RYF7 251 aa5.28□□□□□ -1.56
VTA1-201ENST00000367621 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
VTA1-201ENST00000367621 WFDC13Q8IUB5 93 aa5.25□□□□□ -1.57
VTA1-201ENST00000367621 C8orf87E5RJ46 101 aa5.24□□□□□ -1.57
VTA1-201ENST00000367621 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
VTA1-201ENST00000367621 hDV103S1A0JD37 113 aa5.23□□□□□ -1.57
VTA1-201ENST00000367621 LINC00313P59037 77 aa5.23□□□□□ -1.57
VTA1-201ENST00000367621 ATOX1O00244 68 aa5.22□□□□□ -1.57
VTA1-201ENST00000367621 TMEM254Q8TBM7 123 aa5.22□□□□□ -1.57
VTA1-201ENST00000367621 OCR1Q9BZK8 76 aa5.22□□□□□ -1.57
VTA1-201ENST00000367621 FP248Q71RG6 208 aaPredicted RBP5.21□□□□□ -1.58
VTA1-201ENST00000367621 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
VTA1-201ENST00000367621 IGLV7-46A0A075B6I9 117 aa5.18□□□□□ -1.58
VTA1-201ENST00000367621 C9orf92A6NGG3 77 aa5.18□□□□□ -1.58
VTA1-201ENST00000367621 Q8N9P0 234 aaPredicted RBP5.18□□□□□ -1.58
VTA1-201ENST00000367621 ANAPC13Q9BS18 74 aa5.18□□□□□ -1.58
VTA1-201ENST00000367621 TRAV7A0A075B6U4 112 aa5.17□□□□□ -1.58
VTA1-201ENST00000367621 KRTAP13-3Q3SY46 172 aa5.17□□□□□ -1.58
VTA1-201ENST00000367621 SERP2Q8N6R1 65 aa5.17□□□□□ -1.58
VTA1-201ENST00000367621 SMIM20Q8N5G0 67 aa5.16□□□□□ -1.58
VTA1-201ENST00000367621 A8MUU9 505 aa5.14□□□□□ -1.59
VTA1-201ENST00000367621 COX7CP15954 63 aa5.14□□□□□ -1.59
VTA1-201ENST00000367621 PRR4Q16378 134 aa5.14□□□□□ -1.59
VTA1-201ENST00000367621 Q5W150 140 aa5.14□□□□□ -1.59
VTA1-201ENST00000367621 C20orf166-AS1Q96NR2 134 aa5.14□□□□□ -1.59
VTA1-201ENST00000367621 HMCN2Q8NDA2 5059 aa5.14□□□□□ -1.59
VTA1-201ENST00000367621 CCDC179H3BU77 68 aa5.13□□□□□ -1.59
VTA1-201ENST00000367621 UQCRQO14949 82 aa5.13□□□□□ -1.59
VTA1-201ENST00000367621 TP53AIP1Q9HCN2 124 aa5.12□□□□□ -1.59
VTA1-201ENST00000367621 LPAP08519 4548 aa5.12□□□□□ -1.59
VTA1-201ENST00000367621 NDUFS5O43920 106 aa5.11□□□□□ -1.59
VTA1-201ENST00000367621 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
VTA1-201ENST00000367621 A0A0U1RQV1 116 aa5.09□□□□□ -1.59
VTA1-201ENST00000367621 C5orf47Q569G3 176 aa5.09□□□□□ -1.59
VTA1-201ENST00000367621 ZCCHC13Q8WW36 166 aaKnown RBP5.08□□□□□ -1.6
VTA1-201ENST00000367621 CYSTM1Q9H1C7 97 aa5.08□□□□□ -1.6
VTA1-201ENST00000367621 LRP2P98164 4655 aa5.08□□□□□ -1.6
VTA1-201ENST00000367621 TRAV22A0A0B4J277 110 aa5.07□□□□□ -1.6
VTA1-201ENST00000367621 H0Y9P7 68 aa5.07□□□□□ -1.6
VTA1-201ENST00000367621 C20orf197Q8N268 126 aa5.07□□□□□ -1.6
VTA1-201ENST00000367621 RPL37P61927 97 aaKnown RBP5.06□□□□□ -1.6
VTA1-201ENST00000367621 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
VTA1-201ENST00000367621 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.05□□□□□ -1.6
VTA1-201ENST00000367621 SNURFQ9Y675 71 aa5.05□□□□□ -1.6
VTA1-201ENST00000367621 MUC17Q685J3 4493 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms