RNA–Protein interactions for RNA: ENST00000366738.5

MRPL55-211, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 1 (best) BASIC

Gene MRPL55, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-211ENST00000366738 C21orf62-AS1Q17RA5 79 aa4.5□□□□□ -1.69
MRPL55-211ENST00000366738 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
MRPL55-211ENST00000366738 A0A1B0GW54 56 aa4.49□□□□□ -1.69
MRPL55-211ENST00000366738 Q6ZVQ6 151 aa4.49□□□□□ -1.69
MRPL55-211ENST00000366738 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
MRPL55-211ENST00000366738 IGKV4-1P06312 121 aa4.48□□□□□ -1.69
MRPL55-211ENST00000366738 MT1HP80294 61 aa4.48□□□□□ -1.69
MRPL55-211ENST00000366738 SIGMAR1Q99720 223 aa4.48□□□□□ -1.69
MRPL55-211ENST00000366738 NREPQ16612 68 aa4.47□□□□□ -1.69
MRPL55-211ENST00000366738 FAM240AA0A1B0GVK7 77 aa4.46□□□□□ -1.7
MRPL55-211ENST00000366738 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
MRPL55-211ENST00000366738 SEC61BP60468 96 aaKnown RBP4.46□□□□□ -1.7
MRPL55-211ENST00000366738 KRTAP19-2Q3LHN2 52 aa4.46□□□□□ -1.7
MRPL55-211ENST00000366738 LORP23490 312 aaPredicted RBP4.45□□□□□ -1.7
MRPL55-211ENST00000366738 J3QR89 54 aa4.44□□□□□ -1.7
MRPL55-211ENST00000366738 DSCR10P59022 87 aa4.44□□□□□ -1.7
MRPL55-211ENST00000366738 KRTAP10-6P60371 365 aaPredicted RBP4.44□□□□□ -1.7
MRPL55-211ENST00000366738 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
MRPL55-211ENST00000366738 UBL5Q9BZL1 73 aa4.44□□□□□ -1.7
MRPL55-211ENST00000366738 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
MRPL55-211ENST00000366738 BPY2O14599 106 aa4.43□□□□□ -1.7
MRPL55-211ENST00000366738 XP32Q5T750 250 aa4.43□□□□□ -1.7
MRPL55-211ENST00000366738 IGHV6-1A0A0B4J1U7 121 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 A8MWP4 228 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 J3KT08 172 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 K7EQZ3 153 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 K7ERU9 68 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 ACYP1P07311 99 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 Q8N9L7 120 aa4.42□□□□□ -1.7
MRPL55-211ENST00000366738 A0A1B0GVX0 72 aa4.41□□□□□ -1.7
MRPL55-211ENST00000366738 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
MRPL55-211ENST00000366738 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
MRPL55-211ENST00000366738 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
MRPL55-211ENST00000366738 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
MRPL55-211ENST00000366738 MMP24-AS1A0A0U1RRL7 71 aa4.38□□□□□ -1.71
MRPL55-211ENST00000366738 C8orf17Q9NRJ1 99 aa4.38□□□□□ -1.71
MRPL55-211ENST00000366738 C8orf87E5RJ46 101 aa4.37□□□□□ -1.71
MRPL55-211ENST00000366738 NDUFB1O75438 58 aa4.37□□□□□ -1.71
MRPL55-211ENST00000366738 LINC00313P59037 77 aa4.37□□□□□ -1.71
MRPL55-211ENST00000366738 CXCL6P80162 114 aa4.37□□□□□ -1.71
MRPL55-211ENST00000366738 USH2AO75445 5202 aa4.37□□□□□ -1.71
MRPL55-211ENST00000366738 M0R2T5 61 aa4.36□□□□□ -1.71
MRPL55-211ENST00000366738 ATP5EP2Q5VTU8 51 aa4.36□□□□□ -1.71
MRPL55-211ENST00000366738 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
MRPL55-211ENST00000366738 PCOTHQ58A44 107 aa4.35□□□□□ -1.71
MRPL55-211ENST00000366738 RPL37P61927 97 aaKnown RBP4.34□□□□□ -1.71
MRPL55-211ENST00000366738 WFDC13Q8IUB5 93 aa4.34□□□□□ -1.71
MRPL55-211ENST00000366738 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
MRPL55-211ENST00000366738 A0A087WVE0 104 aa4.33□□□□□ -1.72
MRPL55-211ENST00000366738 A8MUU9 505 aa4.33□□□□□ -1.72
MRPL55-211ENST00000366738 Q75L30 129 aa4.33□□□□□ -1.72
MRPL55-211ENST00000366738 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
MRPL55-211ENST00000366738 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
MRPL55-211ENST00000366738 hDV103S1A0JD37 113 aa4.32□□□□□ -1.72
MRPL55-211ENST00000366738 HCG22E2RYF7 251 aa4.32□□□□□ -1.72
MRPL55-211ENST00000366738 MT-ATP8P03928 68 aa4.31□□□□□ -1.72
MRPL55-211ENST00000366738 HIST1H4AP62805 103 aaKnown RBP4.31□□□□□ -1.72
MRPL55-211ENST00000366738 CASC2Q6XLA1 102 aa4.31□□□□□ -1.72
MRPL55-211ENST00000366738 TMEM254Q8TBM7 123 aa4.31□□□□□ -1.72
MRPL55-211ENST00000366738 MRPL34Q9BQ48 92 aaKnown RBP4.31□□□□□ -1.72
MRPL55-211ENST00000366738 Q8N9P0 234 aaPredicted RBP4.3□□□□□ -1.72
MRPL55-211ENST00000366738 MACF1Q9UPN3 7388 aaKnown RBP4.28□□□□□ -1.72
MRPL55-211ENST00000366738 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
MRPL55-211ENST00000366738 NDUFS5O43920 106 aa4.26□□□□□ -1.73
MRPL55-211ENST00000366738 ATP11AUNQ6ZP68 121 aa4.25□□□□□ -1.73
MRPL55-211ENST00000366738 ZCCHC13Q8WW36 166 aaKnown RBP4.25□□□□□ -1.73
MRPL55-211ENST00000366738 Q5W150 140 aa4.23□□□□□ -1.73
MRPL55-211ENST00000366738 IMUPQ9GZP8 106 aa4.22□□□□□ -1.73
MRPL55-211ENST00000366738 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
MRPL55-211ENST00000366738 FAM236AA0A1B0GUQ0 79 aa4.2□□□□□ -1.74
MRPL55-211ENST00000366738 FAM236BA0A1B0GV22 79 aa4.2□□□□□ -1.74
MRPL55-211ENST00000366738 OCR1Q9BZK8 76 aa4.18□□□□□ -1.74
MRPL55-211ENST00000366738 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
MRPL55-211ENST00000366738 TP53AIP1Q9HCN2 124 aa4.17□□□□□ -1.74
MRPL55-211ENST00000366738 SCGB1A1P11684 91 aa4.16□□□□□ -1.74
MRPL55-211ENST00000366738 IGKV2D-30A0A075B6S6 120 aa4.15□□□□□ -1.75
MRPL55-211ENST00000366738 TRAV22A0A0B4J277 110 aa4.15□□□□□ -1.75
MRPL55-211ENST00000366738 UQCRQO14949 82 aa4.15□□□□□ -1.75
MRPL55-211ENST00000366738 IGKV2-30P06310 120 aa4.15□□□□□ -1.75
MRPL55-211ENST00000366738 HRES1P13985 223 aa4.15□□□□□ -1.75
MRPL55-211ENST00000366738 SPINK7P58062 85 aa4.15□□□□□ -1.75
MRPL55-211ENST00000366738 LCE2BO14633 110 aa4.14□□□□□ -1.75
MRPL55-211ENST00000366738 H0Y9P7 68 aa4.13□□□□□ -1.75
MRPL55-211ENST00000366738 C7orf65Q6ZTY9 151 aa4.13□□□□□ -1.75
MRPL55-211ENST00000366738 MPLKIPQ8TAP9 179 aa4.11□□□□□ -1.75
MRPL55-211ENST00000366738 ATOX1O00244 68 aa4.1□□□□□ -1.75
MRPL55-211ENST00000366738 MT2AP02795 61 aa4.1□□□□□ -1.75
MRPL55-211ENST00000366738 NEBP20929 6669 aa4.1□□□□□ -1.75
MRPL55-211ENST00000366738 TRAV7A0A075B6U4 112 aa4.09□□□□□ -1.75
MRPL55-211ENST00000366738 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
MRPL55-211ENST00000366738 LINC00208Q96KT6 92 aa4.08□□□□□ -1.76
MRPL55-211ENST00000366738 CYP4F30PQ9H0H9 118 aa4.08□□□□□ -1.76
MRPL55-211ENST00000366738 MT1FP04733 61 aa4.07□□□□□ -1.76
MRPL55-211ENST00000366738 MP68P56378 58 aa4.07□□□□□ -1.76
MRPL55-211ENST00000366738 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
MRPL55-211ENST00000366738 SMIM20Q8N5G0 67 aa4.07□□□□□ -1.76
MRPL55-211ENST00000366738 C1orf64Q8NEQ6 169 aa4.07□□□□□ -1.76
MRPL55-211ENST00000366738 PCP4P48539 62 aa4.06□□□□□ -1.76
MRPL55-211ENST00000366738 KLKP1Q107X0 134 aa4.06□□□□□ -1.76
MRPL55-211ENST00000366738 KRTAP9-3Q9BYQ3 159 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms