RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 CXCL6P80162 114 aa3.82□□□□□ -1.8
RNU1-55P-201ENST00000365510 PRR4Q16378 134 aa3.82□□□□□ -1.8
RNU1-55P-201ENST00000365510 DEFB116Q30KQ4 102 aa3.82□□□□□ -1.8
RNU1-55P-201ENST00000365510 KRTAP9-6A0A140TA67 174 aa3.81□□□□□ -1.8
RNU1-55P-201ENST00000365510 NDUFB1O75438 58 aa3.81□□□□□ -1.8
RNU1-55P-201ENST00000365510 CDIP1Q9H305 208 aa3.81□□□□□ -1.8
RNU1-55P-201ENST00000365510 A8MWP4 228 aa3.8□□□□□ -1.8
RNU1-55P-201ENST00000365510 IGKV3D-7A0A0C4DH55 119 aa3.79□□□□□ -1.8
RNU1-55P-201ENST00000365510 LCE2AQ5TA79 106 aaPredicted RBP3.79□□□□□ -1.8
RNU1-55P-201ENST00000365510 IGLV7-46A0A075B6I9 117 aa3.78□□□□□ -1.8
RNU1-55P-201ENST00000365510 IGHV6-1A0A0B4J1U7 121 aa3.78□□□□□ -1.8
RNU1-55P-201ENST00000365510 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
RNU1-55P-201ENST00000365510 K7EQZ3 153 aa3.78□□□□□ -1.8
RNU1-55P-201ENST00000365510 DSCR10P59022 87 aa3.78□□□□□ -1.8
RNU1-55P-201ENST00000365510 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
RNU1-55P-201ENST00000365510 C8orf87E5RJ46 101 aa3.77□□□□□ -1.81
RNU1-55P-201ENST00000365510 Q8N9L7 120 aa3.77□□□□□ -1.81
RNU1-55P-201ENST00000365510 HIST1H4AP62805 103 aaKnown RBP3.76□□□□□ -1.81
RNU1-55P-201ENST00000365510 MT-ATP8P03928 68 aa3.75□□□□□ -1.81
RNU1-55P-201ENST00000365510 LINC00313P59037 77 aa3.75□□□□□ -1.81
RNU1-55P-201ENST00000365510 C9orf92A6NGG3 77 aa3.74□□□□□ -1.81
RNU1-55P-201ENST00000365510 HCG22E2RYF7 251 aa3.74□□□□□ -1.81
RNU1-55P-201ENST00000365510 TPRXLQ17RH7 258 aa3.74□□□□□ -1.81
RNU1-55P-201ENST00000365510 IMUPQ9GZP8 106 aa3.74□□□□□ -1.81
RNU1-55P-201ENST00000365510 C8orf17Q9NRJ1 99 aa3.74□□□□□ -1.81
RNU1-55P-201ENST00000365510 MMP24-AS1A0A0U1RRL7 71 aa3.73□□□□□ -1.81
RNU1-55P-201ENST00000365510 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
RNU1-55P-201ENST00000365510 MUC17Q685J3 4493 aa3.73□□□□□ -1.81
RNU1-55P-201ENST00000365510 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
RNU1-55P-201ENST00000365510 hDV103S1A0JD37 113 aa3.72□□□□□ -1.81
RNU1-55P-201ENST00000365510 CASC2Q6XLA1 102 aa3.72□□□□□ -1.81
RNU1-55P-201ENST00000365510 TMEM254Q8TBM7 123 aa3.72□□□□□ -1.81
RNU1-55P-201ENST00000365510 A0A087WVE0 104 aa3.71□□□□□ -1.82
RNU1-55P-201ENST00000365510 NOTCH2NLQ7Z3S9 236 aa3.71□□□□□ -1.82
RNU1-55P-201ENST00000365510 WFDC13Q8IUB5 93 aa3.71□□□□□ -1.82
RNU1-55P-201ENST00000365510 MRPL34Q9BQ48 92 aaKnown RBP3.7□□□□□ -1.82
RNU1-55P-201ENST00000365510 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
RNU1-55P-201ENST00000365510 NDUFS5O43920 106 aa3.69□□□□□ -1.82
RNU1-55P-201ENST00000365510 KRTAP4-1Q9BYQ7 146 aa3.69□□□□□ -1.82
RNU1-55P-201ENST00000365510 FAM236AA0A1B0GUQ0 79 aa3.68□□□□□ -1.82
RNU1-55P-201ENST00000365510 FAM236BA0A1B0GV22 79 aa3.68□□□□□ -1.82
RNU1-55P-201ENST00000365510 SCGB1A1P11684 91 aa3.68□□□□□ -1.82
RNU1-55P-201ENST00000365510 XP32Q5T750 250 aa3.68□□□□□ -1.82
RNU1-55P-201ENST00000365510 Q75L30 129 aa3.68□□□□□ -1.82
RNU1-55P-201ENST00000365510 C20orf166-AS1Q96NR2 134 aa3.68□□□□□ -1.82
RNU1-55P-201ENST00000365510 Q8N9P0 234 aaPredicted RBP3.67□□□□□ -1.82
RNU1-55P-201ENST00000365510 A8MUU9 505 aa3.66□□□□□ -1.82
RNU1-55P-201ENST00000365510 RPL37P61927 97 aaKnown RBP3.66□□□□□ -1.82
RNU1-55P-201ENST00000365510 A0A0U1RQV1 116 aa3.65□□□□□ -1.83
RNU1-55P-201ENST00000365510 TP53AIP1Q9HCN2 124 aa3.65□□□□□ -1.83
RNU1-55P-201ENST00000365510 ATOX1O00244 68 aa3.64□□□□□ -1.83
RNU1-55P-201ENST00000365510 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
RNU1-55P-201ENST00000365510 CRCT1Q9UGL9 99 aa3.64□□□□□ -1.83
RNU1-55P-201ENST00000365510 UQCRQO14949 82 aa3.63□□□□□ -1.83
RNU1-55P-201ENST00000365510 SMIM20Q8N5G0 67 aa3.63□□□□□ -1.83
RNU1-55P-201ENST00000365510 SEC61BP60468 96 aaKnown RBP3.62□□□□□ -1.83
RNU1-55P-201ENST00000365510 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
RNU1-55P-201ENST00000365510 OCR1Q9BZK8 76 aa3.62□□□□□ -1.83
RNU1-55P-201ENST00000365510 TRAV22A0A0B4J277 110 aa3.61□□□□□ -1.83
RNU1-55P-201ENST00000365510 LCE2DQ5TA82 110 aaPredicted RBP3.61□□□□□ -1.83
RNU1-55P-201ENST00000365510 PCOTHQ58A44 107 aa3.6□□□□□ -1.83
RNU1-55P-201ENST00000365510 TRAV7A0A075B6U4 112 aa3.59□□□□□ -1.83
RNU1-55P-201ENST00000365510 H0Y9P7 68 aa3.58□□□□□ -1.84
RNU1-55P-201ENST00000365510 MP68P56378 58 aa3.58□□□□□ -1.84
RNU1-55P-201ENST00000365510 C5orf47Q569G3 176 aa3.58□□□□□ -1.84
RNU1-55P-201ENST00000365510 LCE2CQ5TA81 110 aa3.58□□□□□ -1.84
RNU1-55P-201ENST00000365510 Q5W150 140 aa3.57□□□□□ -1.84
RNU1-55P-201ENST00000365510 SERP2Q8N6R1 65 aa3.57□□□□□ -1.84
RNU1-55P-201ENST00000365510 ANAPC13Q9BS18 74 aa3.57□□□□□ -1.84
RNU1-55P-201ENST00000365510 IGKV2D-30A0A075B6S6 120 aa3.56□□□□□ -1.84
RNU1-55P-201ENST00000365510 H3BPC8 53 aa3.56□□□□□ -1.84
RNU1-55P-201ENST00000365510 IGKV2-30P06310 120 aa3.56□□□□□ -1.84
RNU1-55P-201ENST00000365510 C7orf65Q6ZTY9 151 aa3.56□□□□□ -1.84
RNU1-55P-201ENST00000365510 LOC101927531A0A1B0GV80 90 aa3.55□□□□□ -1.84
RNU1-55P-201ENST00000365510 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
RNU1-55P-201ENST00000365510 C1orf64Q8NEQ6 169 aa3.54□□□□□ -1.84
RNU1-55P-201ENST00000365510 LINC00208Q96KT6 92 aa3.54□□□□□ -1.84
RNU1-55P-201ENST00000365510 COX7CP15954 63 aa3.53□□□□□ -1.84
RNU1-55P-201ENST00000365510 SPINK7P58062 85 aa3.53□□□□□ -1.84
RNU1-55P-201ENST00000365510 C20orf197Q8N268 126 aa3.52□□□□□ -1.85
RNU1-55P-201ENST00000365510 MT1HP80294 61 aa3.51□□□□□ -1.85
RNU1-55P-201ENST00000365510 CYP4F30PQ9H0H9 118 aa3.51□□□□□ -1.85
RNU1-55P-201ENST00000365510 SNURFQ9Y675 71 aa3.5□□□□□ -1.85
RNU1-55P-201ENST00000365510 KLKP1Q107X0 134 aa3.49□□□□□ -1.85
RNU1-55P-201ENST00000365510 HRES1P13985 223 aa3.47□□□□□ -1.85
RNU1-55P-201ENST00000365510 RBM12B-AS1Q9P1G2 102 aa3.47□□□□□ -1.85
RNU1-55P-201ENST00000365510 CCDC179H3BU77 68 aa3.46□□□□□ -1.86
RNU1-55P-201ENST00000365510 NDUFC1O43677 76 aa3.46□□□□□ -1.86
RNU1-55P-201ENST00000365510 LORP23490 312 aaPredicted RBP3.46□□□□□ -1.86
RNU1-55P-201ENST00000365510 KRTAP10-6P60371 365 aaPredicted RBP3.46□□□□□ -1.86
RNU1-55P-201ENST00000365510 FAM236DA0A1B0GTK5 79 aa3.45□□□□□ -1.86
RNU1-55P-201ENST00000365510 FAM236CP0DP71 79 aa3.45□□□□□ -1.86
RNU1-55P-201ENST00000365510 C4orf26Q17RF5 130 aa3.45□□□□□ -1.86
RNU1-55P-201ENST00000365510 COX6B2Q6YFQ2 88 aa3.44□□□□□ -1.86
RNU1-55P-201ENST00000365510 PCP4P48539 62 aa3.43□□□□□ -1.86
RNU1-55P-201ENST00000365510 MPLKIPQ8TAP9 179 aa3.43□□□□□ -1.86
RNU1-55P-201ENST00000365510 A8MUN3 132 aa3.42□□□□□ -1.86
RNU1-55P-201ENST00000365510 H7BZZ5 65 aa3.42□□□□□ -1.86
RNU1-55P-201ENST00000365510 SPANXA2-OT1Q8N9U9 137 aa3.42□□□□□ -1.86
RNU1-55P-201ENST00000365510 CYSTM1Q9H1C7 97 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms