RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 ATP10BO94823 1461 aa-3.9□□□□□ -3.03
RNU6-238P-201ENST00000363313 CCDC58Q4VC31 144 aa-3.9□□□□□ -3.03
RNU6-238P-201ENST00000363313 LZICQ8WZA0 190 aa-3.9□□□□□ -3.03
RNU6-238P-201ENST00000363313 SELENOWP63302 87 aa-3.91□□□□□ -3.04
RNU6-238P-201ENST00000363313 THOC2Q8NI27 1593 aaKnown RBP-3.91□□□□□ -3.04
RNU6-238P-201ENST00000363313 LINC00470Q9BZP3 86 aa-3.91□□□□□ -3.04
RNU6-238P-201ENST00000363313 CDH23Q9H251 3354 aa-3.91□□□□□ -3.04
RNU6-238P-201ENST00000363313 ERVK-7P63135 1459 aa-3.92□□□□□ -3.04
RNU6-238P-201ENST00000363313 DIP2BQ9P265 1576 aa-3.92□□□□□ -3.04
RNU6-238P-201ENST00000363313 GNG7O60262 68 aa-3.92□□□□□ -3.04
RNU6-238P-201ENST00000363313 LEAP2Q969E1 77 aa-3.92□□□□□ -3.04
RNU6-238P-201ENST00000363313 ZNF720Q7Z2F6 126 aa-3.93□□□□□ -3.04
RNU6-238P-201ENST00000363313 AKAIN1P0CW23 69 aa-3.94□□□□□ -3.04
RNU6-238P-201ENST00000363313 PLGLAQ15195 96 aa-3.95□□□□□ -3.04
RNU6-238P-201ENST00000363313 CCNB3Q8WWL7 1395 aa-3.96□□□□□ -3.04
RNU6-238P-201ENST00000363313 SVBPQ8N300 66 aa-3.96□□□□□ -3.04
RNU6-238P-201ENST00000363313 MYOM2P54296 1465 aa-3.98□□□□□ -3.05
RNU6-238P-201ENST00000363313 DEFB131BA0A096LNP1 70 aa-3.98□□□□□ -3.05
RNU6-238P-201ENST00000363313 CYB5AP00167 134 aa-3.98□□□□□ -3.05
RNU6-238P-201ENST00000363313 NRKQ7Z2Y5 1582 aa-3.98□□□□□ -3.05
RNU6-238P-201ENST00000363313 MED14O60244 1454 aa-3.98□□□□□ -3.05
RNU6-238P-201ENST00000363313 ARFGEF2Q9Y6D5 1785 aa-3.99□□□□□ -3.05
RNU6-238P-201ENST00000363313 IER3IP1Q9Y5U9 82 aa-4□□□□□ -3.05
RNU6-238P-201ENST00000363313 TJP1Q07157 1748 aa-4.01□□□□□ -3.05
RNU6-238P-201ENST00000363313 MINOS1Q5TGZ0 78 aa-4.01□□□□□ -3.05
RNU6-238P-201ENST00000363313 CD163L1Q9NR16 1453 aa-4.01□□□□□ -3.05
RNU6-238P-201ENST00000363313 CLTCQ00610 1675 aaKnown RBP-4.01□□□□□ -3.05
RNU6-238P-201ENST00000363313 PPLO60437 1756 aa-4.02□□□□□ -3.05
RNU6-238P-201ENST00000363313 KIF21BO75037 1637 aa-4.02□□□□□ -3.05
RNU6-238P-201ENST00000363313 NCBP2-AS2Q69YL0 99 aa-4.02□□□□□ -3.05
RNU6-238P-201ENST00000363313 PYDC1Q8WXC3 89 aa-4.02□□□□□ -3.05
RNU6-238P-201ENST00000363313 VPS13AQ96RL7 3174 aa-4.02□□□□□ -3.05
RNU6-238P-201ENST00000363313 NRAPQ86VF7 1730 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 NDUFA4O00483 81 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 NDUFB1O75438 58 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 SFTA3P0C7M3 94 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 KRTAP19-2Q3LHN2 52 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 RPL13AP3Q6NVV1 102 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 ACBD7Q8N6N7 88 aa-4.03□□□□□ -3.05
RNU6-238P-201ENST00000363313 ROCK2O75116 1388 aaKnown RBP-4.03□□□□□ -3.06
RNU6-238P-201ENST00000363313 CROCC2H7BZ55 1655 aa-4.03□□□□□ -3.06
RNU6-238P-201ENST00000363313 GNGT2O14610 69 aa-4.04□□□□□ -3.06
RNU6-238P-201ENST00000363313 SNAPC5O75971 98 aa-4.04□□□□□ -3.06
RNU6-238P-201ENST00000363313 PIK3C2BO00750 1634 aa-4.04□□□□□ -3.06
RNU6-238P-201ENST00000363313 UBR1Q8IWV7 1749 aa-4.04□□□□□ -3.06
RNU6-238P-201ENST00000363313 NCOA2Q15596 1464 aa-4.05□□□□□ -3.06
RNU6-238P-201ENST00000363313 IFI27P40305 119 aaPredicted RBP-4.05□□□□□ -3.06
RNU6-238P-201ENST00000363313 C20orf78Q9BR46 151 aa-4.05□□□□□ -3.06
RNU6-238P-201ENST00000363313 CRIP1P50238 77 aa-4.06□□□□□ -3.06
RNU6-238P-201ENST00000363313 MAP3K4Q9Y6R4 1608 aa-4.06□□□□□ -3.06
RNU6-238P-201ENST00000363313 NALCNQ8IZF0 1738 aa-4.07□□□□□ -3.06
RNU6-238P-201ENST00000363313 MRPL33O75394 65 aaKnown RBP-4.07□□□□□ -3.06
RNU6-238P-201ENST00000363313 HMGN2P05204 90 aaKnown RBP-4.07□□□□□ -3.06
RNU6-238P-201ENST00000363313 CCDC88BA6NC98 1476 aa-4.07□□□□□ -3.06
RNU6-238P-201ENST00000363313 RNF17Q9BXT8 1623 aaKnown RBP-4.07□□□□□ -3.06
RNU6-238P-201ENST00000363313 ATOX1O00244 68 aa-4.08□□□□□ -3.06
RNU6-238P-201ENST00000363313 MRPS10P82664 201 aaKnown RBP-4.08□□□□□ -3.06
RNU6-238P-201ENST00000363313 C6orf48Q9UBA6 75 aa-4.08□□□□□ -3.06
RNU6-238P-201ENST00000363313 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-4.09□□□□□ -3.06
RNU6-238P-201ENST00000363313 UQCRHLA0A096LP55 91 aa-4.09□□□□□ -3.06
RNU6-238P-201ENST00000363313 FCER1GP30273 86 aa-4.09□□□□□ -3.06
RNU6-238P-201ENST00000363313 PMCHL2Q9BQD1 86 aa-4.09□□□□□ -3.06
RNU6-238P-201ENST00000363313 EPRSP07814 1512 aaKnown RBP-4.1□□□□□ -3.07
RNU6-238P-201ENST00000363313 PZPP20742 1482 aa-4.1□□□□□ -3.07
RNU6-238P-201ENST00000363313 RICTORQ6R327 1708 aa-4.11□□□□□ -3.07
RNU6-238P-201ENST00000363313 INO80Q9ULG1 1556 aaPredicted RBP-4.11□□□□□ -3.07
RNU6-238P-201ENST00000363313 UTRNP46939 3433 aa-4.13□□□□□ -3.07
RNU6-238P-201ENST00000363313 UMAD1C9J7I0 102 aa-4.13□□□□□ -3.07
RNU6-238P-201ENST00000363313 PPP3R1P63098 170 aa-4.13□□□□□ -3.07
RNU6-238P-201ENST00000363313 NEXMIFQ5QGS0 1516 aa-4.13□□□□□ -3.07
RNU6-238P-201ENST00000363313 FANCAO15360 1455 aa-4.13□□□□□ -3.07
RNU6-238P-201ENST00000363313 LINC00032P0C843 101 aa-4.14□□□□□ -3.07
RNU6-238P-201ENST00000363313 GNG4P50150 75 aa-4.15□□□□□ -3.07
RNU6-238P-201ENST00000363313 KIF14Q15058 1648 aa-4.16□□□□□ -3.08
RNU6-238P-201ENST00000363313 COL5A1-AS1Q5SY13 56 aa-4.16□□□□□ -3.08
RNU6-238P-201ENST00000363313 URB2Q14146 1524 aaKnown RBP-4.16□□□□□ -3.08
RNU6-238P-201ENST00000363313 KCNQ1DNQ9H478 68 aa-4.17□□□□□ -3.08
RNU6-238P-201ENST00000363313 ARHGAP35Q9NRY4 1499 aa-4.18□□□□□ -3.08
RNU6-238P-201ENST00000363313 PREX2Q70Z35 1606 aa-4.19□□□□□ -3.08
RNU6-238P-201ENST00000363313 FAUP35544 74 aaKnown RBP-4.19□□□□□ -3.08
RNU6-238P-201ENST00000363313 MYO5CQ9NQX4 1742 aa-4.19□□□□□ -3.08
RNU6-238P-201ENST00000363313 MYO3AQ8NEV4 1616 aa-4.2□□□□□ -3.08
RNU6-238P-201ENST00000363313 MYMXA0A1B0GTQ4 84 aa-4.21□□□□□ -3.08
RNU6-238P-201ENST00000363313 DPY30Q9C005 99 aa-4.21□□□□□ -3.08
RNU6-238P-201ENST00000363313 ZFYVE16Q7Z3T8 1539 aa-4.21□□□□□ -3.08
RNU6-238P-201ENST00000363313 HFM1A2PYH4 1435 aa-4.21□□□□□ -3.08
RNU6-238P-201ENST00000363313 NDUFA2O43678 99 aa-4.22□□□□□ -3.08
RNU6-238P-201ENST00000363313 SMIM11AP58511 58 aa-4.22□□□□□ -3.08
RNU6-238P-201ENST00000363313 PEA15Q15121 130 aa-4.22□□□□□ -3.08
RNU6-238P-201ENST00000363313 NREPQ16612 68 aa-4.22□□□□□ -3.08
RNU6-238P-201ENST00000363313 CFAP43Q8NDM7 1665 aa-4.22□□□□□ -3.09
RNU6-238P-201ENST00000363313 FAM208AQ9UK61 1670 aaKnown RBP-4.22□□□□□ -3.09
RNU6-238P-201ENST00000363313 SARNPP82979 210 aaKnown RBP-4.23□□□□□ -3.09
RNU6-238P-201ENST00000363313 UBL5Q9BZL1 73 aa-4.23□□□□□ -3.09
RNU6-238P-201ENST00000363313 CORTO00230 105 aa-4.25□□□□□ -3.09
RNU6-238P-201ENST00000363313 HMGA1P17096 107 aaKnown RBP-4.25□□□□□ -3.09
RNU6-238P-201ENST00000363313 UNC13AQ9UPW8 1703 aa-4.25□□□□□ -3.09
RNU6-238P-201ENST00000363313 CEBPZOSA8MTT3 80 aa-4.26□□□□□ -3.09
RNU6-238P-201ENST00000363313 NHSQ6T4R5 1651 aa-4.26□□□□□ -3.09
RNU6-238P-201ENST00000363313 GTF2H5Q6ZYL4 71 aa-4.27□□□□□ -3.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms