RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 A0A087WTM6 91 aa11.53□□□□□ -0.56
CMTM3-201ENST00000361909 A0A1B0GVX0 72 aa11.5□□□□□ -0.57
CMTM3-201ENST00000361909 KRTAP11-1Q8IUC1 163 aa11.5□□□□□ -0.57
CMTM3-201ENST00000361909 KRTAP13-1Q8IUC0 172 aa11.49□□□□□ -0.57
CMTM3-201ENST00000361909 MRPL34Q9BQ48 92 aaKnown RBP11.48□□□□□ -0.57
CMTM3-201ENST00000361909 KMT2AQ03164 3969 aa11.48□□□□□ -0.57
CMTM3-201ENST00000361909 SPINK7P58062 85 aa11.48□□□□□ -0.57
CMTM3-201ENST00000361909 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
CMTM3-201ENST00000361909 DNAH6Q9C0G6 4158 aa11.44□□□□□ -0.58
CMTM3-201ENST00000361909 LINC00483Q53H64 154 aa11.42□□□□□ -0.58
CMTM3-201ENST00000361909 ALMS1Q8TCU4 4167 aa11.41□□□□□ -0.58
CMTM3-201ENST00000361909 CHTF8P0CG12 524 aa11.41□□□□□ -0.58
CMTM3-201ENST00000361909 IGHV6-1A0A0B4J1U7 121 aa11.4□□□□□ -0.58
CMTM3-201ENST00000361909 ZNF706Q9Y5V0 76 aaPredicted RBP11.39□□□□□ -0.59
CMTM3-201ENST00000361909 RTL8CO15255 209 aa11.38□□□□□ -0.59
CMTM3-201ENST00000361909 IGLV9-49A0A0B4J1Y8 123 aa11.36□□□□□ -0.59
CMTM3-201ENST00000361909 A0A087X002 238 aa11.35□□□□□ -0.59
CMTM3-201ENST00000361909 ACYP2P14621 99 aa11.35□□□□□ -0.59
CMTM3-201ENST00000361909 DNAH2Q9P225 4427 aa11.34□□□□□ -0.59
CMTM3-201ENST00000361909 IGLV5-52A0A0A0MRZ9 124 aa11.33□□□□□ -0.6
CMTM3-201ENST00000361909 SPACA4Q8TDM5 124 aa11.33□□□□□ -0.6
CMTM3-201ENST00000361909 KRTAP13-3Q3SY46 172 aa11.3□□□□□ -0.6
CMTM3-201ENST00000361909 PANO1I0J062 215 aa11.29□□□□□ -0.6
CMTM3-201ENST00000361909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.29□□□□□ -0.6
CMTM3-201ENST00000361909 PRR26Q8N8Z3 221 aa11.28□□□□□ -0.6
CMTM3-201ENST00000361909 LINC00313P59037 77 aa11.27□□□□□ -0.6
CMTM3-201ENST00000361909 DNAH17Q9UFH2 4485 aa11.27□□□□□ -0.61
CMTM3-201ENST00000361909 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
CMTM3-201ENST00000361909 DMAC1Q96GE9 116 aa11.26□□□□□ -0.61
CMTM3-201ENST00000361909 HECTD4Q9Y4D8 3996 aa11.25□□□□□ -0.61
CMTM3-201ENST00000361909 FRAS1Q86XX4 4008 aa11.23□□□□□ -0.61
CMTM3-201ENST00000361909 C8orf87E5RJ46 101 aa11.21□□□□□ -0.61
CMTM3-201ENST00000361909 KRTAP10-2P60368 255 aa11.21□□□□□ -0.61
CMTM3-201ENST00000361909 NOTCH2NLQ7Z3S9 236 aa11.2□□□□□ -0.62
CMTM3-201ENST00000361909 SPATA8Q6RVD6 105 aa11.19□□□□□ -0.62
CMTM3-201ENST00000361909 Q5W150 140 aa11.18□□□□□ -0.62
CMTM3-201ENST00000361909 HYDINQ4G0P3 5121 aa11.18□□□□□ -0.62
CMTM3-201ENST00000361909 A0A1B0GU69 56 aa11.17□□□□□ -0.62
CMTM3-201ENST00000361909 SRRM2Q9UQ35 2752 aaKnown RBP11.13□□□□□ -0.63
CMTM3-201ENST00000361909 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
CMTM3-201ENST00000361909 Q6ZSA8 131 aa11.11□□□□□ -0.63
CMTM3-201ENST00000361909 SACSQ9NZJ4 4579 aa11.11□□□□□ -0.63
CMTM3-201ENST00000361909 ZNF861PO60384 105 aa11.1□□□□□ -0.63
CMTM3-201ENST00000361909 LINC01554Q52M75 96 aa11.1□□□□□ -0.63
CMTM3-201ENST00000361909 FAT2Q9NYQ8 4349 aa11.09□□□□□ -0.63
CMTM3-201ENST00000361909 PRAC1Q96KF2 57 aa11.09□□□□□ -0.63
CMTM3-201ENST00000361909 UQCR11O14957 56 aa11.09□□□□□ -0.63
CMTM3-201ENST00000361909 DNAH11Q96DT5 4516 aa11.08□□□□□ -0.63
CMTM3-201ENST00000361909 KRTAP10-1P60331 282 aa11.07□□□□□ -0.64
CMTM3-201ENST00000361909 MIR22HGQ0VDD5 57 aa11.06□□□□□ -0.64
CMTM3-201ENST00000361909 PSORS1C2Q9UIG4 136 aa11.06□□□□□ -0.64
CMTM3-201ENST00000361909 CIRBP-AS1Q8TBR5 109 aa11.06□□□□□ -0.64
CMTM3-201ENST00000361909 PKD1P98161 4303 aa11.05□□□□□ -0.64
CMTM3-201ENST00000361909 SPINK6Q6UWN8 80 aa11.04□□□□□ -0.64
CMTM3-201ENST00000361909 IGKV2-30P06310 120 aa11.03□□□□□ -0.64
CMTM3-201ENST00000361909 DNAH5Q8TE73 4624 aa11.03□□□□□ -0.64
CMTM3-201ENST00000361909 A0A1B0GVY2 172 aa10.99□□□□□ -0.65
CMTM3-201ENST00000361909 ADM2Q7Z4H4 148 aa10.99□□□□□ -0.65
CMTM3-201ENST00000361909 SSBP3-AS1Q7Z2R9 100 aa10.97□□□□□ -0.65
CMTM3-201ENST00000361909 C4orf48Q5BLP8 95 aa10.97□□□□□ -0.65
CMTM3-201ENST00000361909 ANAPC11Q9NYG5 84 aa10.97□□□□□ -0.65
CMTM3-201ENST00000361909 DNAH8Q96JB1 4490 aa10.96□□□□□ -0.65
CMTM3-201ENST00000361909 RETNLBQ9BQ08 111 aa10.95□□□□□ -0.66
CMTM3-201ENST00000361909 IGLV7-43P04211 117 aa10.94□□□□□ -0.66
CMTM3-201ENST00000361909 RYR2Q92736 4967 aa10.9□□□□□ -0.66
CMTM3-201ENST00000361909 KMT2CQ8NEZ4 4911 aaKnown RBP10.87□□□□□ -0.67
CMTM3-201ENST00000361909 IGKV2D-30A0A075B6S6 120 aa10.82□□□□□ -0.68
CMTM3-201ENST00000361909 PKHD1P08F94 4074 aa10.81□□□□□ -0.68
CMTM3-201ENST00000361909 KRTAP16-1A8MUX0 517 aa10.8□□□□□ -0.68
CMTM3-201ENST00000361909 CSAG1Q6PB30 78 aa10.79□□□□□ -0.68
CMTM3-201ENST00000361909 LRP1BQ9NZR2 4599 aa10.76□□□□□ -0.69
CMTM3-201ENST00000361909 DYNC1H1Q14204 4646 aaKnown RBP10.7□□□□□ -0.7
CMTM3-201ENST00000361909 H3BS24 57 aa10.66□□□□□ -0.7
CMTM3-201ENST00000361909 VPS13BQ7Z7G8 4022 aa10.66□□□□□ -0.7
CMTM3-201ENST00000361909 SMR3BP02814 79 aaPredicted RBP10.65□□□□□ -0.71
CMTM3-201ENST00000361909 KRTAP1-4P0C5Y4 121 aa10.62□□□□□ -0.71
CMTM3-201ENST00000361909 KRTAP13-2Q52LG2 175 aa10.6□□□□□ -0.71
CMTM3-201ENST00000361909 RYR3Q15413 4870 aa10.6□□□□□ -0.71
CMTM3-201ENST00000361909 KRTAP10-4P60372 401 aaPredicted RBP10.59□□□□□ -0.71
CMTM3-201ENST00000361909 APOBP04114 4563 aaKnown RBP10.59□□□□□ -0.71
CMTM3-201ENST00000361909 A8MUU9 505 aa10.59□□□□□ -0.71
CMTM3-201ENST00000361909 KRTAP25-1Q3LHN0 102 aa10.53□□□□□ -0.72
CMTM3-201ENST00000361909 SPINK1P00995 79 aa10.52□□□□□ -0.73
CMTM3-201ENST00000361909 H0YAA0 97 aa10.5□□□□□ -0.73
CMTM3-201ENST00000361909 Q8N1X5 172 aa10.46□□□□□ -0.73
CMTM3-201ENST00000361909 TYMSOSQ8TAI1 123 aa10.46□□□□□ -0.74
CMTM3-201ENST00000361909 LINC00304Q8N9R0 145 aa10.45□□□□□ -0.74
CMTM3-201ENST00000361909 A0A1B0GU33 70 aa10.42□□□□□ -0.74
CMTM3-201ENST00000361909 FAT1Q14517 4588 aa10.42□□□□□ -0.74
CMTM3-201ENST00000361909 Q5VSD8 79 aa10.41□□□□□ -0.74
CMTM3-201ENST00000361909 H1FX-AS1Q4G0G2 97 aa10.39□□□□□ -0.75
CMTM3-201ENST00000361909 ROMO1P60602 79 aa10.38□□□□□ -0.75
CMTM3-201ENST00000361909 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
CMTM3-201ENST00000361909 HSPG2P98160 4391 aa10.35□□□□□ -0.75
CMTM3-201ENST00000361909 K7ERS5 55 aa10.35□□□□□ -0.75
CMTM3-201ENST00000361909 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
CMTM3-201ENST00000361909 RYR1P21817 5038 aa10.29□□□□□ -0.76
CMTM3-201ENST00000361909 KRTAP17-1Q9BYP8 105 aa10.25□□□□□ -0.77
CMTM3-201ENST00000361909 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
CMTM3-201ENST00000361909 EPPK1P58107 5090 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms