RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SPINK7P58062 85 aa8.46□□□□□ -1.05
COL6A1-201ENST00000361866 LINC01554Q52M75 96 aa8.46□□□□□ -1.06
COL6A1-201ENST00000361866 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
COL6A1-201ENST00000361866 ZFHX3Q15911 3703 aa8.45□□□□□ -1.06
COL6A1-201ENST00000361866 KRTAP29-1A8MX34 341 aaPredicted RBP8.45□□□□□ -1.06
COL6A1-201ENST00000361866 Q8N1X5 172 aa8.45□□□□□ -1.06
COL6A1-201ENST00000361866 SPRR1BP22528 89 aa8.44□□□□□ -1.06
COL6A1-201ENST00000361866 NBPF19A0A087WUL8 3843 aa8.43□□□□□ -1.06
COL6A1-201ENST00000361866 OTOGQ6ZRI0 2925 aa8.41□□□□□ -1.06
COL6A1-201ENST00000361866 LINC01558Q9Y6Z2 57 aa8.41□□□□□ -1.06
COL6A1-201ENST00000361866 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.07
COL6A1-201ENST00000361866 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
COL6A1-201ENST00000361866 A0A087X002 238 aa8.37□□□□□ -1.07
COL6A1-201ENST00000361866 NOTCH2NLQ7Z3S9 236 aa8.37□□□□□ -1.07
COL6A1-201ENST00000361866 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
COL6A1-201ENST00000361866 SMR3BP02814 79 aaPredicted RBP8.35□□□□□ -1.07
COL6A1-201ENST00000361866 LCE6AA0A183 80 aa8.34□□□□□ -1.07
COL6A1-201ENST00000361866 TENM2Q9NT68 2774 aa8.33□□□□□ -1.08
COL6A1-201ENST00000361866 VPS13CQ709C8 3753 aa8.31□□□□□ -1.08
COL6A1-201ENST00000361866 Q5W150 140 aa8.29□□□□□ -1.08
COL6A1-201ENST00000361866 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
COL6A1-201ENST00000361866 LINC00304Q8N9R0 145 aa8.27□□□□□ -1.09
COL6A1-201ENST00000361866 PLAC8Q9NZF1 115 aa8.25□□□□□ -1.09
COL6A1-201ENST00000361866 Q6ZR54 194 aa8.24□□□□□ -1.09
COL6A1-201ENST00000361866 TGP01266 2768 aa8.22□□□□□ -1.09
COL6A1-201ENST00000361866 A6NN06 94 aa8.21□□□□□ -1.09
COL6A1-201ENST00000361866 SRRM2Q9UQ35 2752 aaKnown RBP8.21□□□□□ -1.1
COL6A1-201ENST00000361866 ADM2Q7Z4H4 148 aa8.17□□□□□ -1.1
COL6A1-201ENST00000361866 A0A0D9SG42 100 aa8.16□□□□□ -1.1
COL6A1-201ENST00000361866 TRRAPQ9Y4A5 3859 aa8.16□□□□□ -1.1
COL6A1-201ENST00000361866 LINC00483Q53H64 154 aa8.16□□□□□ -1.1
COL6A1-201ENST00000361866 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
COL6A1-201ENST00000361866 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
COL6A1-201ENST00000361866 KRTAP10-2P60368 255 aa8.12□□□□□ -1.11
COL6A1-201ENST00000361866 A0A1B0GU33 70 aa8.1□□□□□ -1.11
COL6A1-201ENST00000361866 KRTAP13-1Q8IUC0 172 aa8.08□□□□□ -1.12
COL6A1-201ENST00000361866 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
COL6A1-201ENST00000361866 KRTAP10-1P60331 282 aa8.04□□□□□ -1.12
COL6A1-201ENST00000361866 J3QL48 77 aa7.99□□□□□ -1.13
COL6A1-201ENST00000361866 FBN3Q75N90 2809 aa7.95□□□□□ -1.14
COL6A1-201ENST00000361866 SPATA8Q6RVD6 105 aa7.94□□□□□ -1.14
COL6A1-201ENST00000361866 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
COL6A1-201ENST00000361866 ZNF469Q96JG9 3925 aaPredicted RBP7.91□□□□□ -1.14
COL6A1-201ENST00000361866 COL7A1Q02388 2944 aa7.91□□□□□ -1.14
COL6A1-201ENST00000361866 ASB16-AS1Q495Z4 193 aa7.89□□□□□ -1.15
COL6A1-201ENST00000361866 CSMD3Q7Z407 3707 aa7.83□□□□□ -1.16
COL6A1-201ENST00000361866 ANK3Q12955 4377 aaKnown RBP7.82□□□□□ -1.16
COL6A1-201ENST00000361866 KRTAP21-3Q3LHN1 58 aa7.8□□□□□ -1.16
COL6A1-201ENST00000361866 H1FX-AS1Q4G0G2 97 aa7.79□□□□□ -1.16
COL6A1-201ENST00000361866 KRTAP25-1Q3LHN0 102 aa7.76□□□□□ -1.17
COL6A1-201ENST00000361866 RPL37P61927 97 aaKnown RBP7.72□□□□□ -1.17
COL6A1-201ENST00000361866 ROMO1P60602 79 aa7.72□□□□□ -1.17
COL6A1-201ENST00000361866 COX6B2Q6YFQ2 88 aa7.72□□□□□ -1.17
COL6A1-201ENST00000361866 MEGF8Q7Z7M0 2845 aa7.72□□□□□ -1.17
COL6A1-201ENST00000361866 Q5VSD8 79 aa7.69□□□□□ -1.18
COL6A1-201ENST00000361866 S4R3F8 94 aa7.68□□□□□ -1.18
COL6A1-201ENST00000361866 LUZP6Q538Z0 58 aa7.67□□□□□ -1.18
COL6A1-201ENST00000361866 NDUFAF8A1L188 74 aa7.65□□□□□ -1.18
COL6A1-201ENST00000361866 Q6ZSA8 131 aa7.64□□□□□ -1.19
COL6A1-201ENST00000361866 KRTAP16-1A8MUX0 517 aa7.62□□□□□ -1.19
COL6A1-201ENST00000361866 AKAP9Q99996 3911 aa7.61□□□□□ -1.19
COL6A1-201ENST00000361866 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
COL6A1-201ENST00000361866 A8MUU9 505 aa7.58□□□□□ -1.2
COL6A1-201ENST00000361866 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
COL6A1-201ENST00000361866 H0YAA0 97 aa7.54□□□□□ -1.2
COL6A1-201ENST00000361866 R4GN34 69 aa7.5□□□□□ -1.21
COL6A1-201ENST00000361866 A0A0A0MQY5 61 aa7.49□□□□□ -1.21
COL6A1-201ENST00000361866 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
COL6A1-201ENST00000361866 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.21
COL6A1-201ENST00000361866 M0QZ58 72 aa7.44□□□□□ -1.22
COL6A1-201ENST00000361866 C20orf166-AS1Q96NR2 134 aa7.44□□□□□ -1.22
COL6A1-201ENST00000361866 C10orf95Q9H7T3 257 aa7.41□□□□□ -1.22
COL6A1-201ENST00000361866 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
COL6A1-201ENST00000361866 M0R2T5 61 aa7.28□□□□□ -1.24
COL6A1-201ENST00000361866 HUWE1Q7Z6Z7 4374 aaKnown RBP7.24□□□□□ -1.25
COL6A1-201ENST00000361866 P0C880 135 aa7.24□□□□□ -1.25
COL6A1-201ENST00000361866 KRTAP3-1Q9BYR8 98 aa7.2□□□□□ -1.26
COL6A1-201ENST00000361866 DNAH10Q8IVF4 4471 aa7.19□□□□□ -1.26
COL6A1-201ENST00000361866 XP32Q5T750 250 aa7.19□□□□□ -1.26
COL6A1-201ENST00000361866 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
COL6A1-201ENST00000361866 PLECQ15149 4684 aaKnown RBP7.02□□□□□ -1.29
COL6A1-201ENST00000361866 KRTAP12-2P59991 146 aa7□□□□□ -1.29
COL6A1-201ENST00000361866 TPRXLQ17RH7 258 aa7□□□□□ -1.29
COL6A1-201ENST00000361866 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
COL6A1-201ENST00000361866 PLAC4Q8WY50 150 aa7□□□□□ -1.29
COL6A1-201ENST00000361866 KRTAP10-8P60410 259 aa6.99□□□□□ -1.29
COL6A1-201ENST00000361866 DNAH11Q96DT5 4516 aa6.95□□□□□ -1.3
COL6A1-201ENST00000361866 DNAH9Q9NYC9 4486 aa6.94□□□□□ -1.3
COL6A1-201ENST00000361866 KRTAP10-6P60371 365 aaPredicted RBP6.93□□□□□ -1.3
COL6A1-201ENST00000361866 DNAH1Q9P2D7 4330 aa6.89□□□□□ -1.31
COL6A1-201ENST00000361866 ANK2Q01484 3957 aa6.88□□□□□ -1.31
COL6A1-201ENST00000361866 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
COL6A1-201ENST00000361866 DNHD1Q96M86 4753 aa6.84□□□□□ -1.31
COL6A1-201ENST00000361866 DNAH8Q96JB1 4490 aa6.79□□□□□ -1.32
COL6A1-201ENST00000361866 TNP1P09430 55 aa6.79□□□□□ -1.32
COL6A1-201ENST00000361866 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
COL6A1-201ENST00000361866 LYSTQ99698 3801 aa6.77□□□□□ -1.33
COL6A1-201ENST00000361866 STARD9Q9P2P6 4700 aa6.76□□□□□ -1.33
COL6A1-201ENST00000361866 DNAH5Q8TE73 4624 aa6.75□□□□□ -1.33
COL6A1-201ENST00000361866 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 159.4 ms