RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 C4orf26Q17RF5 130 aa4.29□□□□□ -1.72
RAB5B-201ENST00000360299 DNAH1Q9P2D7 4330 aa4.28□□□□□ -1.72
RAB5B-201ENST00000360299 TENM2Q9NT68 2774 aa4.28□□□□□ -1.72
RAB5B-201ENST00000360299 OXTP01178 125 aa4.28□□□□□ -1.72
RAB5B-201ENST00000360299 LYSTQ99698 3801 aa4.28□□□□□ -1.72
RAB5B-201ENST00000360299 KRTAP4-16G5E9R7 235 aaPredicted RBP4.26□□□□□ -1.73
RAB5B-201ENST00000360299 LINC00472Q9H8W2 130 aa4.26□□□□□ -1.73
RAB5B-201ENST00000360299 UQCR11O14957 56 aa4.25□□□□□ -1.73
RAB5B-201ENST00000360299 FLG2Q5D862 2391 aaPredicted RBP4.25□□□□□ -1.73
RAB5B-201ENST00000360299 LINC00483Q53H64 154 aa4.25□□□□□ -1.73
RAB5B-201ENST00000360299 RBM12B-AS1Q9P1G2 102 aa4.25□□□□□ -1.73
RAB5B-201ENST00000360299 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
RAB5B-201ENST00000360299 A8MUN3 132 aa4.24□□□□□ -1.73
RAB5B-201ENST00000360299 HUWE1Q7Z6Z7 4374 aaKnown RBP4.23□□□□□ -1.73
RAB5B-201ENST00000360299 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
RAB5B-201ENST00000360299 PANO1I0J062 215 aa4.22□□□□□ -1.73
RAB5B-201ENST00000360299 Q6ZRN7 208 aaPredicted RBP4.21□□□□□ -1.73
RAB5B-201ENST00000360299 CSMD3Q7Z407 3707 aa4.21□□□□□ -1.74
RAB5B-201ENST00000360299 TENM3Q9P273 2699 aa4.2□□□□□ -1.74
RAB5B-201ENST00000360299 DNAH10Q8IVF4 4471 aa4.2□□□□□ -1.74
RAB5B-201ENST00000360299 ZCCHC13Q8WW36 166 aaKnown RBP4.19□□□□□ -1.74
RAB5B-201ENST00000360299 DNAH7Q8WXX0 4024 aa4.18□□□□□ -1.74
RAB5B-201ENST00000360299 COL7A1Q02388 2944 aa4.18□□□□□ -1.74
RAB5B-201ENST00000360299 DNAH9Q9NYC9 4486 aa4.18□□□□□ -1.74
RAB5B-201ENST00000360299 H3BS24 57 aa4.18□□□□□ -1.74
RAB5B-201ENST00000360299 MIR22HGQ0VDD5 57 aa4.17□□□□□ -1.74
RAB5B-201ENST00000360299 HRES1P13985 223 aa4.16□□□□□ -1.74
RAB5B-201ENST00000360299 SRRM2Q9UQ35 2752 aaKnown RBP4.16□□□□□ -1.74
RAB5B-201ENST00000360299 FBN3Q75N90 2809 aa4.16□□□□□ -1.74
RAB5B-201ENST00000360299 TGP01266 2768 aa4.15□□□□□ -1.74
RAB5B-201ENST00000360299 Q1T7F1 81 aa4.15□□□□□ -1.74
RAB5B-201ENST00000360299 ASB16-AS1Q495Z4 193 aa4.15□□□□□ -1.75
RAB5B-201ENST00000360299 FP248Q71RG6 208 aaPredicted RBP4.14□□□□□ -1.75
RAB5B-201ENST00000360299 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
RAB5B-201ENST00000360299 Q5W150 140 aa4.13□□□□□ -1.75
RAB5B-201ENST00000360299 KRTAP7-1Q8IUC3 87 aa4.11□□□□□ -1.75
RAB5B-201ENST00000360299 DYNC2H1Q8NCM8 4307 aaKnown RBP4.11□□□□□ -1.75
RAB5B-201ENST00000360299 KRTAP29-1A8MX34 341 aaPredicted RBP4.11□□□□□ -1.75
RAB5B-201ENST00000360299 KRTAP13-1Q8IUC0 172 aa4.1□□□□□ -1.75
RAB5B-201ENST00000360299 Q8N9P0 234 aaPredicted RBP4.1□□□□□ -1.75
RAB5B-201ENST00000360299 Q5XG85 94 aa4.1□□□□□ -1.75
RAB5B-201ENST00000360299 CDC42SE1Q9NRR8 79 aa4.1□□□□□ -1.75
RAB5B-201ENST00000360299 KTN1-AS1Q86SY8 53 aa4.09□□□□□ -1.75
RAB5B-201ENST00000360299 LINC01558Q9Y6Z2 57 aa4.09□□□□□ -1.75
RAB5B-201ENST00000360299 SPINK7P58062 85 aa4.09□□□□□ -1.75
RAB5B-201ENST00000360299 LCA10Q71F78 164 aa4.08□□□□□ -1.76
RAB5B-201ENST00000360299 A0A087X002 238 aa4.08□□□□□ -1.76
RAB5B-201ENST00000360299 KRTAP11-1Q8IUC1 163 aa4.08□□□□□ -1.76
RAB5B-201ENST00000360299 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
RAB5B-201ENST00000360299 SPINT4Q6UDR6 99 aa4.08□□□□□ -1.76
RAB5B-201ENST00000360299 Q75L30 129 aa4.07□□□□□ -1.76
RAB5B-201ENST00000360299 CSAG1Q6PB30 78 aa4.06□□□□□ -1.76
RAB5B-201ENST00000360299 A0A1B0GU33 70 aa4.05□□□□□ -1.76
RAB5B-201ENST00000360299 CYSTM1Q9H1C7 97 aa4.05□□□□□ -1.76
RAB5B-201ENST00000360299 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
RAB5B-201ENST00000360299 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
RAB5B-201ENST00000360299 DMAC1Q96GE9 116 aa4.04□□□□□ -1.76
RAB5B-201ENST00000360299 STARD9Q9P2P6 4700 aa4.03□□□□□ -1.76
RAB5B-201ENST00000360299 S4R3F8 94 aa4.03□□□□□ -1.76
RAB5B-201ENST00000360299 PRKDCP78527 4128 aaKnown RBP4.02□□□□□ -1.77
RAB5B-201ENST00000360299 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
RAB5B-201ENST00000360299 DNAH2Q9P225 4427 aa4.01□□□□□ -1.77
RAB5B-201ENST00000360299 KMT2AQ03164 3969 aa4□□□□□ -1.77
RAB5B-201ENST00000360299 KRTAP13-2Q52LG2 175 aa4□□□□□ -1.77
RAB5B-201ENST00000360299 HECTD4Q9Y4D8 3996 aa4□□□□□ -1.77
RAB5B-201ENST00000360299 FRAS1Q86XX4 4008 aa4□□□□□ -1.77
RAB5B-201ENST00000360299 VPS13DQ5THJ4 4388 aa3.98□□□□□ -1.77
RAB5B-201ENST00000360299 A0A0D9SG42 100 aa3.98□□□□□ -1.77
RAB5B-201ENST00000360299 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
RAB5B-201ENST00000360299 Q5VV11 94 aa3.96□□□□□ -1.78
RAB5B-201ENST00000360299 DNHD1Q96M86 4753 aa3.95□□□□□ -1.78
RAB5B-201ENST00000360299 DNAH8Q96JB1 4490 aa3.95□□□□□ -1.78
RAB5B-201ENST00000360299 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
RAB5B-201ENST00000360299 DNAH17Q9UFH2 4485 aa3.92□□□□□ -1.78
RAB5B-201ENST00000360299 R4GN34 69 aa3.92□□□□□ -1.78
RAB5B-201ENST00000360299 DNAH6Q9C0G6 4158 aa3.91□□□□□ -1.78
RAB5B-201ENST00000360299 MEGF8Q7Z7M0 2845 aa3.91□□□□□ -1.78
RAB5B-201ENST00000360299 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.78
RAB5B-201ENST00000360299 RPL37P61927 97 aaKnown RBP3.9□□□□□ -1.78
RAB5B-201ENST00000360299 A8MUU9 505 aa3.89□□□□□ -1.79
RAB5B-201ENST00000360299 KRTAP1-4P0C5Y4 121 aa3.89□□□□□ -1.79
RAB5B-201ENST00000360299 H1FX-AS1Q4G0G2 97 aa3.89□□□□□ -1.79
RAB5B-201ENST00000360299 C20orf166-AS1Q96NR2 134 aa3.89□□□□□ -1.79
RAB5B-201ENST00000360299 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
RAB5B-201ENST00000360299 DNAH5Q8TE73 4624 aa3.86□□□□□ -1.79
RAB5B-201ENST00000360299 DNAH11Q96DT5 4516 aa3.86□□□□□ -1.79
RAB5B-201ENST00000360299 HYDINQ4G0P3 5121 aa3.85□□□□□ -1.79
RAB5B-201ENST00000360299 PKD1P98161 4303 aa3.84□□□□□ -1.79
RAB5B-201ENST00000360299 A0A0A0MQY5 61 aa3.84□□□□□ -1.8
RAB5B-201ENST00000360299 SPATA8Q6RVD6 105 aa3.83□□□□□ -1.8
RAB5B-201ENST00000360299 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
RAB5B-201ENST00000360299 FAT2Q9NYQ8 4349 aa3.83□□□□□ -1.8
RAB5B-201ENST00000360299 M0QZ58 72 aa3.83□□□□□ -1.8
RAB5B-201ENST00000360299 ADM2Q7Z4H4 148 aa3.82□□□□□ -1.8
RAB5B-201ENST00000360299 TPRXLQ17RH7 258 aa3.81□□□□□ -1.8
RAB5B-201ENST00000360299 ROMO1P60602 79 aa3.8□□□□□ -1.8
RAB5B-201ENST00000360299 XP32Q5T750 250 aa3.79□□□□□ -1.8
RAB5B-201ENST00000360299 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
RAB5B-201ENST00000360299 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
RAB5B-201ENST00000360299 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms