RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 COX17Q14061 63 aa3.87□□□□□ -1.79
CCDC196-201ENST00000359454 Q5VV11 94 aa3.87□□□□□ -1.79
CCDC196-201ENST00000359454 TMEM254Q8TBM7 123 aa3.87□□□□□ -1.79
CCDC196-201ENST00000359454 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
CCDC196-201ENST00000359454 PSORS1C2Q9UIG4 136 aa3.87□□□□□ -1.79
CCDC196-201ENST00000359454 LINC00959A0A1B0GUT2 108 aa3.86□□□□□ -1.79
CCDC196-201ENST00000359454 HCG22E2RYF7 251 aa3.86□□□□□ -1.79
CCDC196-201ENST00000359454 PSPHP1O15172 72 aa3.86□□□□□ -1.79
CCDC196-201ENST00000359454 C6orf99Q4VX62 202 aa3.86□□□□□ -1.79
CCDC196-201ENST00000359454 RNASE13Q5GAN3 156 aaKnown RBP3.86□□□□□ -1.79
CCDC196-201ENST00000359454 Q8IZM0 81 aa3.86□□□□□ -1.79
CCDC196-201ENST00000359454 Q75L30 129 aa3.85□□□□□ -1.79
CCDC196-201ENST00000359454 NOTCH2NLQ7Z3S9 236 aa3.85□□□□□ -1.79
CCDC196-201ENST00000359454 SPTSSBQ8NFR3 76 aa3.85□□□□□ -1.79
CCDC196-201ENST00000359454 ZNF625Q96I27 306 aaPredicted RBP3.85□□□□□ -1.79
CCDC196-201ENST00000359454 LIMD2Q9BT23 127 aa3.85□□□□□ -1.79
CCDC196-201ENST00000359454 IGHV6-1A0A0B4J1U7 121 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 A0A1W2PNN7 141 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 C1orf137Q5JT78 98 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 LINC00308Q8TCZ7 52 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 C14orf132Q9NPU4 83 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 CDC42SE1Q9NRR8 79 aa3.84□□□□□ -1.79
CCDC196-201ENST00000359454 NREPQ16612 68 aa3.83□□□□□ -1.8
CCDC196-201ENST00000359454 IGLV1-50A0A075B6I6 118 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 A8MU10 97 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 JMJD7-PLA2G4BH0Y9G9 81 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 CHKB-CPT1BH3BT56 60 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 IGLV7-43P04211 117 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 LINC00158P58513 81 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 PRR4Q16378 134 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 C9orf116Q5BN46 136 aaPredicted RBP3.82□□□□□ -1.8
CCDC196-201ENST00000359454 LCE1AQ5T7P2 110 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 TOMM7Q9P0U1 55 aa3.82□□□□□ -1.8
CCDC196-201ENST00000359454 ZNF706Q9Y5V0 76 aaPredicted RBP3.82□□□□□ -1.8
CCDC196-201ENST00000359454 H0YGX0 51 aa3.81□□□□□ -1.8
CCDC196-201ENST00000359454 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
CCDC196-201ENST00000359454 C1orf64Q8NEQ6 169 aa3.81□□□□□ -1.8
CCDC196-201ENST00000359454 CAMK2N2Q96S95 79 aa3.81□□□□□ -1.8
CCDC196-201ENST00000359454 LPAP08519 4548 aa3.8□□□□□ -1.8
CCDC196-201ENST00000359454 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
CCDC196-201ENST00000359454 MOBPQ13875 183 aa3.8□□□□□ -1.8
CCDC196-201ENST00000359454 SND1-IT1Q9HBX3 110 aa3.8□□□□□ -1.8
CCDC196-201ENST00000359454 H3BQ85 93 aa3.79□□□□□ -1.8
CCDC196-201ENST00000359454 MIR7-3HGQ8N6C7 128 aa3.79□□□□□ -1.8
CCDC196-201ENST00000359454 FAM218AQ96MZ4 157 aa3.79□□□□□ -1.8
CCDC196-201ENST00000359454 KRTAP1-4P0C5Y4 121 aa3.78□□□□□ -1.8
CCDC196-201ENST00000359454 LINC01547P58512 204 aaPredicted RBP3.77□□□□□ -1.81
CCDC196-201ENST00000359454 ELOF1P60002 83 aaKnown RBP3.77□□□□□ -1.81
CCDC196-201ENST00000359454 SPAG11BQ08648 103 aa3.77□□□□□ -1.81
CCDC196-201ENST00000359454 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
CCDC196-201ENST00000359454 KRTAP11-1Q8IUC1 163 aa3.77□□□□□ -1.81
CCDC196-201ENST00000359454 LINC00167Q96N53 147 aa3.77□□□□□ -1.81
CCDC196-201ENST00000359454 OCR1Q9BZK8 76 aa3.77□□□□□ -1.81
CCDC196-201ENST00000359454 ORMDL1Q9P0S3 153 aa3.77□□□□□ -1.81
CCDC196-201ENST00000359454 A6NED7 52 aa3.76□□□□□ -1.81
CCDC196-201ENST00000359454 BPY2O14599 106 aa3.76□□□□□ -1.81
CCDC196-201ENST00000359454 A0A1B0GW54 56 aa3.75□□□□□ -1.81
CCDC196-201ENST00000359454 FAM168BA1KXE4 195 aa3.75□□□□□ -1.81
CCDC196-201ENST00000359454 NCR3O14931 201 aa3.75□□□□□ -1.81
CCDC196-201ENST00000359454 TLX1NBP0CAT3 122 aa3.75□□□□□ -1.81
CCDC196-201ENST00000359454 CASC2Q6XLA1 102 aa3.75□□□□□ -1.81
CCDC196-201ENST00000359454 PRR15LQ9BU68 103 aa3.75□□□□□ -1.81
CCDC196-201ENST00000359454 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
CCDC196-201ENST00000359454 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
CCDC196-201ENST00000359454 RETNLBQ9BQ08 111 aa3.74□□□□□ -1.81
CCDC196-201ENST00000359454 MUC2Q02817 5179 aa3.74□□□□□ -1.81
CCDC196-201ENST00000359454 IGKV2-28A0A075B6P5 120 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 ZNF861PO60384 105 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 IGKV2D-28P01615 120 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 PDE6GP18545 87 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 UNQ6190/PRO20217Q6UXQ8 127 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 SMIM11BQ8TCY0 68 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 Q9BRP9 147 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 C6orf48Q9UBA6 75 aa3.73□□□□□ -1.81
CCDC196-201ENST00000359454 NDUFB1O75438 58 aa3.72□□□□□ -1.81
CCDC196-201ENST00000359454 FAT4Q6V0I7 4981 aa3.71□□□□□ -1.81
CCDC196-201ENST00000359454 PRAC1Q96KF2 57 aa3.71□□□□□ -1.82
CCDC196-201ENST00000359454 HIGD2AQ9BW72 106 aa3.71□□□□□ -1.82
CCDC196-201ENST00000359454 Q6ZQT0 140 aa3.7□□□□□ -1.82
CCDC196-201ENST00000359454 TYMSOSQ8TAI1 123 aa3.7□□□□□ -1.82
CCDC196-201ENST00000359454 IGLV6-57P01721 117 aa3.69□□□□□ -1.82
CCDC196-201ENST00000359454 SMIM29Q86T20 159 aa3.69□□□□□ -1.82
CCDC196-201ENST00000359454 TPRXLQ17RH7 258 aa3.68□□□□□ -1.82
CCDC196-201ENST00000359454 SPANXA2-OT1Q8N9U9 137 aa3.68□□□□□ -1.82
CCDC196-201ENST00000359454 IGLV7-46A0A075B6I9 117 aa3.67□□□□□ -1.82
CCDC196-201ENST00000359454 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.67□□□□□ -1.82
CCDC196-201ENST00000359454 LINC00575Q6W349 94 aa3.67□□□□□ -1.82
CCDC196-201ENST00000359454 LINC00208Q96KT6 92 aa3.67□□□□□ -1.82
CCDC196-201ENST00000359454 XAGE1AQ9HD64 81 aa3.67□□□□□ -1.82
CCDC196-201ENST00000359454 LINC00304Q8N9R0 145 aa3.66□□□□□ -1.82
CCDC196-201ENST00000359454 LINC01558Q9Y6Z2 57 aa3.66□□□□□ -1.82
CCDC196-201ENST00000359454 COX7BP24311 80 aa3.65□□□□□ -1.83
CCDC196-201ENST00000359454 KRTAP13-2Q52LG2 175 aa3.65□□□□□ -1.83
CCDC196-201ENST00000359454 ANAPC11Q9NYG5 84 aa3.65□□□□□ -1.83
CCDC196-201ENST00000359454 IGKV4-1P06312 121 aa3.64□□□□□ -1.83
CCDC196-201ENST00000359454 ROMO1P60602 79 aa3.64□□□□□ -1.83
CCDC196-201ENST00000359454 KCNQ1DNQ9H478 68 aa3.64□□□□□ -1.83
CCDC196-201ENST00000359454 DHRS4-AS1Q9P1J3 65 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms