RNA–Protein interactions for RNA: ENST00000358540.6

PTPN5-201, Transcript of protein tyrosine phosphatase, non-receptor type 5, humanhuman

TSL 1 (best) BASIC

Gene PTPN5, Length 3,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5-201ENST00000358540 DNAH11Q96DT5 4516 aa9.67□□□□□ -0.86
PTPN5-201ENST00000358540 COA5Q86WW8 74 aa9.66□□□□□ -0.86
PTPN5-201ENST00000358540 WWC2-AS2Q96NR7 200 aa9.66□□□□□ -0.86
PTPN5-201ENST00000358540 Q75L30 129 aa9.65□□□□□ -0.87
PTPN5-201ENST00000358540 H3BPC8 53 aa9.63□□□□□ -0.87
PTPN5-201ENST00000358540 ZNF861PO60384 105 aa9.62□□□□□ -0.87
PTPN5-201ENST00000358540 MOBPQ13875 183 aa9.62□□□□□ -0.87
PTPN5-201ENST00000358540 PCOTHQ58A44 107 aa9.62□□□□□ -0.87
PTPN5-201ENST00000358540 SPAG11AQ6PDA7 123 aa9.61□□□□□ -0.87
PTPN5-201ENST00000358540 A6NN06 94 aa9.6□□□□□ -0.87
PTPN5-201ENST00000358540 NDUFS5O43920 106 aa9.6□□□□□ -0.87
PTPN5-201ENST00000358540 LOC101927531A0A1B0GV80 90 aa9.6□□□□□ -0.87
PTPN5-201ENST00000358540 CIRBP-AS1Q8TBR5 109 aa9.6□□□□□ -0.87
PTPN5-201ENST00000358540 LINC00472Q9H8W2 130 aa9.59□□□□□ -0.87
PTPN5-201ENST00000358540 LINC00483Q53H64 154 aa9.58□□□□□ -0.88
PTPN5-201ENST00000358540 CDC42SE1Q9NRR8 79 aa9.58□□□□□ -0.88
PTPN5-201ENST00000358540 ZNF706Q9Y5V0 76 aaPredicted RBP9.57□□□□□ -0.88
PTPN5-201ENST00000358540 IGLV7-46A0A075B6I9 117 aa9.56□□□□□ -0.88
PTPN5-201ENST00000358540 A8MWP4 228 aa9.56□□□□□ -0.88
PTPN5-201ENST00000358540 IGLV7-43P04211 117 aa9.56□□□□□ -0.88
PTPN5-201ENST00000358540 ALMS1Q8TCU4 4167 aa9.55□□□□□ -0.88
PTPN5-201ENST00000358540 KRTAP10-1P60331 282 aa9.55□□□□□ -0.88
PTPN5-201ENST00000358540 FAT2Q9NYQ8 4349 aa9.55□□□□□ -0.88
PTPN5-201ENST00000358540 LRP1BQ9NZR2 4599 aa9.53□□□□□ -0.88
PTPN5-201ENST00000358540 C7orf65Q6ZTY9 151 aa9.51□□□□□ -0.89
PTPN5-201ENST00000358540 PKD1P98161 4303 aa9.5□□□□□ -0.89
PTPN5-201ENST00000358540 SPINK7P58062 85 aa9.5□□□□□ -0.89
PTPN5-201ENST00000358540 Q96NJ1 140 aa9.5□□□□□ -0.89
PTPN5-201ENST00000358540 LINC01558Q9Y6Z2 57 aa9.49□□□□□ -0.89
PTPN5-201ENST00000358540 KRTAP21-3Q3LHN1 58 aa9.48□□□□□ -0.89
PTPN5-201ENST00000358540 MMP24-AS1A0A0U1RRL7 71 aa9.48□□□□□ -0.89
PTPN5-201ENST00000358540 SPINK6Q6UWN8 80 aa9.43□□□□□ -0.9
PTPN5-201ENST00000358540 SACSQ9NZJ4 4579 aa9.43□□□□□ -0.9
PTPN5-201ENST00000358540 IGHV6-1A0A0B4J1U7 121 aa9.42□□□□□ -0.9
PTPN5-201ENST00000358540 Q6ZSA8 131 aa9.42□□□□□ -0.9
PTPN5-201ENST00000358540 HRES1P13985 223 aa9.41□□□□□ -0.9
PTPN5-201ENST00000358540 A0A087X002 238 aa9.4□□□□□ -0.91
PTPN5-201ENST00000358540 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
PTPN5-201ENST00000358540 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
PTPN5-201ENST00000358540 CDK2AP2O75956 126 aa9.37□□□□□ -0.91
PTPN5-201ENST00000358540 TP53AIP1Q9HCN2 124 aa9.37□□□□□ -0.91
PTPN5-201ENST00000358540 VPS13BQ7Z7G8 4022 aa9.36□□□□□ -0.91
PTPN5-201ENST00000358540 PRAC1Q96KF2 57 aa9.36□□□□□ -0.91
PTPN5-201ENST00000358540 C8orf17Q9NRJ1 99 aa9.36□□□□□ -0.91
PTPN5-201ENST00000358540 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
PTPN5-201ENST00000358540 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
PTPN5-201ENST00000358540 LINC00313P59037 77 aa9.34□□□□□ -0.92
PTPN5-201ENST00000358540 KRTAP13-2Q52LG2 175 aa9.34□□□□□ -0.92
PTPN5-201ENST00000358540 C8orf87E5RJ46 101 aa9.32□□□□□ -0.92
PTPN5-201ENST00000358540 SSBP3-AS1Q7Z2R9 100 aa9.29□□□□□ -0.92
PTPN5-201ENST00000358540 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
PTPN5-201ENST00000358540 ASB16-AS1Q495Z4 193 aa9.28□□□□□ -0.92
PTPN5-201ENST00000358540 DYNC1H1Q14204 4646 aaKnown RBP9.27□□□□□ -0.93
PTPN5-201ENST00000358540 SMR3BP02814 79 aaPredicted RBP9.26□□□□□ -0.93
PTPN5-201ENST00000358540 KRTAP1-4P0C5Y4 121 aa9.26□□□□□ -0.93
PTPN5-201ENST00000358540 C4orf48Q5BLP8 95 aa9.25□□□□□ -0.93
PTPN5-201ENST00000358540 MRPL34Q9BQ48 92 aaKnown RBP9.24□□□□□ -0.93
PTPN5-201ENST00000358540 PLA2G1BP04054 148 aaKnown RBP9.21□□□□□ -0.93
PTPN5-201ENST00000358540 FAT1Q14517 4588 aa9.2□□□□□ -0.94
PTPN5-201ENST00000358540 KMT2CQ8NEZ4 4911 aaKnown RBP9.18□□□□□ -0.94
PTPN5-201ENST00000358540 Q5W150 140 aa9.16□□□□□ -0.94
PTPN5-201ENST00000358540 RYR2Q92736 4967 aa9.16□□□□□ -0.94
PTPN5-201ENST00000358540 ACYP2P14621 99 aa9.15□□□□□ -0.94
PTPN5-201ENST00000358540 TYMSOSQ8TAI1 123 aa9.15□□□□□ -0.94
PTPN5-201ENST00000358540 LINC01554Q52M75 96 aa9.15□□□□□ -0.95
PTPN5-201ENST00000358540 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
PTPN5-201ENST00000358540 A0A1B0GU69 56 aa9.11□□□□□ -0.95
PTPN5-201ENST00000358540 A0A1B0GVY2 172 aa9.11□□□□□ -0.95
PTPN5-201ENST00000358540 APOBP04114 4563 aaKnown RBP9.11□□□□□ -0.95
PTPN5-201ENST00000358540 H3BS24 57 aa9.05□□□□□ -0.96
PTPN5-201ENST00000358540 SPATA8Q6RVD6 105 aa9.04□□□□□ -0.96
PTPN5-201ENST00000358540 MIR22HGQ0VDD5 57 aa9.03□□□□□ -0.96
PTPN5-201ENST00000358540 KRTAP13-3Q3SY46 172 aa9.02□□□□□ -0.97
PTPN5-201ENST00000358540 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
PTPN5-201ENST00000358540 DMAC1Q96GE9 116 aa9□□□□□ -0.97
PTPN5-201ENST00000358540 SPINK1P00995 79 aa9□□□□□ -0.97
PTPN5-201ENST00000358540 UQCR11O14957 56 aa8.99□□□□□ -0.97
PTPN5-201ENST00000358540 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
PTPN5-201ENST00000358540 KRTAP16-1A8MUX0 517 aa8.98□□□□□ -0.97
PTPN5-201ENST00000358540 KRTAP10-4P60372 401 aaPredicted RBP8.98□□□□□ -0.97
PTPN5-201ENST00000358540 FAM229AH3BQW9 127 aa8.93□□□□□ -0.98
PTPN5-201ENST00000358540 RYR3Q15413 4870 aa8.91□□□□□ -0.98
PTPN5-201ENST00000358540 IGKV2D-30A0A075B6S6 120 aa8.88□□□□□ -0.99
PTPN5-201ENST00000358540 IGKV2-30P06310 120 aa8.88□□□□□ -0.99
PTPN5-201ENST00000358540 C9orf92A6NGG3 77 aa8.87□□□□□ -0.99
PTPN5-201ENST00000358540 PKHD1L1Q86WI1 4243 aa8.86□□□□□ -0.99
PTPN5-201ENST00000358540 LRP1Q07954 4544 aaKnown RBP8.84□□□□□ -0.99
PTPN5-201ENST00000358540 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
PTPN5-201ENST00000358540 HSPG2P98160 4391 aa8.8□□□□□ -1
PTPN5-201ENST00000358540 FLG2Q5D862 2391 aaPredicted RBP8.78□□□□□ -1
PTPN5-201ENST00000358540 Q5VSD8 79 aa8.76□□□□□ -1.01
PTPN5-201ENST00000358540 Q8N1X5 172 aa8.73□□□□□ -1.01
PTPN5-201ENST00000358540 KRTAP17-1Q9BYP8 105 aa8.72□□□□□ -1.01
PTPN5-201ENST00000358540 RYR1P21817 5038 aa8.72□□□□□ -1.01
PTPN5-201ENST00000358540 KIAA1109Q2LD37 5005 aa8.72□□□□□ -1.01
PTPN5-201ENST00000358540 DMBT1Q9UGM3 2413 aaPredicted RBP8.71□□□□□ -1.02
PTPN5-201ENST00000358540 TNXBP22105 4242 aa8.68□□□□□ -1.02
PTPN5-201ENST00000358540 FAT3Q8TDW7 4589 aa8.65□□□□□ -1.02
PTPN5-201ENST00000358540 A8MUU9 505 aa8.63□□□□□ -1.03
PTPN5-201ENST00000358540 C20orf166-AS1Q96NR2 134 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms