RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 Q96NJ1 140 aa4.6□□□□□ -1.67
BRCA1-201ENST00000352993 DNAH9Q9NYC9 4486 aa4.59□□□□□ -1.67
BRCA1-201ENST00000352993 Q5W150 140 aa4.59□□□□□ -1.68
BRCA1-201ENST00000352993 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
BRCA1-201ENST00000352993 KRTAP1-5Q9BYS1 174 aa4.58□□□□□ -1.68
BRCA1-201ENST00000352993 TENM2Q9NT68 2774 aa4.58□□□□□ -1.68
BRCA1-201ENST00000352993 C14orf177Q52M58 125 aa4.58□□□□□ -1.68
BRCA1-201ENST00000352993 DNAH6Q9C0G6 4158 aa4.58□□□□□ -1.68
BRCA1-201ENST00000352993 NBEAL1Q6ZS30 2694 aa4.58□□□□□ -1.68
BRCA1-201ENST00000352993 PLA2G1BP04054 148 aaKnown RBP4.58□□□□□ -1.68
BRCA1-201ENST00000352993 STAB1Q9NY15 2570 aa4.57□□□□□ -1.68
BRCA1-201ENST00000352993 ASB16-AS1Q495Z4 193 aa4.57□□□□□ -1.68
BRCA1-201ENST00000352993 UQCR11O14957 56 aa4.56□□□□□ -1.68
BRCA1-201ENST00000352993 CSAG1Q6PB30 78 aa4.56□□□□□ -1.68
BRCA1-201ENST00000352993 PANO1I0J062 215 aa4.55□□□□□ -1.68
BRCA1-201ENST00000352993 CIRBP-AS1Q8TBR5 109 aa4.55□□□□□ -1.68
BRCA1-201ENST00000352993 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
BRCA1-201ENST00000352993 RYR3Q15413 4870 aa4.54□□□□□ -1.68
BRCA1-201ENST00000352993 ZNF706Q9Y5V0 76 aaPredicted RBP4.53□□□□□ -1.68
BRCA1-201ENST00000352993 CSMD3Q7Z407 3707 aa4.53□□□□□ -1.68
BRCA1-201ENST00000352993 SPINK1P00995 79 aa4.52□□□□□ -1.69
BRCA1-201ENST00000352993 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
BRCA1-201ENST00000352993 ALMS1Q8TCU4 4167 aa4.52□□□□□ -1.69
BRCA1-201ENST00000352993 RTL8CO15255 209 aa4.51□□□□□ -1.69
BRCA1-201ENST00000352993 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
BRCA1-201ENST00000352993 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
BRCA1-201ENST00000352993 DMAC1Q96GE9 116 aa4.51□□□□□ -1.69
BRCA1-201ENST00000352993 RYR2Q92736 4967 aa4.5□□□□□ -1.69
BRCA1-201ENST00000352993 WWC2-AS2Q96NR7 200 aa4.5□□□□□ -1.69
BRCA1-201ENST00000352993 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.5□□□□□ -1.69
BRCA1-201ENST00000352993 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
BRCA1-201ENST00000352993 KMT2CQ8NEZ4 4911 aaKnown RBP4.49□□□□□ -1.69
BRCA1-201ENST00000352993 PSORS1C2Q9UIG4 136 aa4.48□□□□□ -1.69
BRCA1-201ENST00000352993 FAM229AH3BQW9 127 aa4.48□□□□□ -1.69
BRCA1-201ENST00000352993 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
BRCA1-201ENST00000352993 STAB2Q8WWQ8 2551 aa4.47□□□□□ -1.69
BRCA1-201ENST00000352993 LINC00483Q53H64 154 aa4.46□□□□□ -1.7
BRCA1-201ENST00000352993 HUWE1Q7Z6Z7 4374 aaKnown RBP4.46□□□□□ -1.7
BRCA1-201ENST00000352993 HECTD4Q9Y4D8 3996 aa4.45□□□□□ -1.7
BRCA1-201ENST00000352993 MGAM2Q2M2H8 2515 aa4.45□□□□□ -1.7
BRCA1-201ENST00000352993 ZNF861PO60384 105 aa4.45□□□□□ -1.7
BRCA1-201ENST00000352993 KRTAP13-3Q3SY46 172 aa4.44□□□□□ -1.7
BRCA1-201ENST00000352993 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
BRCA1-201ENST00000352993 SPACA4Q8TDM5 124 aa4.43□□□□□ -1.7
BRCA1-201ENST00000352993 FLG2Q5D862 2391 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-201ENST00000352993 DNAH10Q8IVF4 4471 aa4.42□□□□□ -1.7
BRCA1-201ENST00000352993 IGLV5-52A0A0A0MRZ9 124 aa4.42□□□□□ -1.7
BRCA1-201ENST00000352993 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
BRCA1-201ENST00000352993 FRAS1Q86XX4 4008 aa4.42□□□□□ -1.7
BRCA1-201ENST00000352993 BIRC6Q9NR09 4857 aa4.41□□□□□ -1.7
BRCA1-201ENST00000352993 APLNQ9ULZ1 77 aa4.41□□□□□ -1.7
BRCA1-201ENST00000352993 Q8N1X5 172 aa4.4□□□□□ -1.7
BRCA1-201ENST00000352993 KRTAP3-3Q9BYR6 98 aa4.4□□□□□ -1.7
BRCA1-201ENST00000352993 KRTAP3-2Q9BYR7 98 aa4.4□□□□□ -1.7
BRCA1-201ENST00000352993 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
BRCA1-201ENST00000352993 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
BRCA1-201ENST00000352993 VPS13DQ5THJ4 4388 aa4.38□□□□□ -1.71
BRCA1-201ENST00000352993 STARD9Q9P2P6 4700 aa4.37□□□□□ -1.71
BRCA1-201ENST00000352993 A0A087WTM6 91 aa4.36□□□□□ -1.71
BRCA1-201ENST00000352993 TGP01266 2768 aa4.36□□□□□ -1.71
BRCA1-201ENST00000352993 SSBP3-AS1Q7Z2R9 100 aa4.36□□□□□ -1.71
BRCA1-201ENST00000352993 PLECQ15149 4684 aaKnown RBP4.34□□□□□ -1.71
BRCA1-201ENST00000352993 DNAH17Q9UFH2 4485 aa4.34□□□□□ -1.71
BRCA1-201ENST00000352993 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.72
BRCA1-201ENST00000352993 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.72
BRCA1-201ENST00000352993 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
BRCA1-201ENST00000352993 ROMO1P60602 79 aa4.32□□□□□ -1.72
BRCA1-201ENST00000352993 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
BRCA1-201ENST00000352993 LY6G6CO95867 125 aa4.31□□□□□ -1.72
BRCA1-201ENST00000352993 FAT2Q9NYQ8 4349 aa4.31□□□□□ -1.72
BRCA1-201ENST00000352993 K7ERS5 55 aa4.31□□□□□ -1.72
BRCA1-201ENST00000352993 LINC00304Q8N9R0 145 aa4.31□□□□□ -1.72
BRCA1-201ENST00000352993 A0A1B0GU33 70 aa4.3□□□□□ -1.72
BRCA1-201ENST00000352993 Q6ZSA8 131 aa4.3□□□□□ -1.72
BRCA1-201ENST00000352993 H0YAA0 97 aa4.3□□□□□ -1.72
BRCA1-201ENST00000352993 HERC2O95714 4834 aa4.29□□□□□ -1.72
BRCA1-201ENST00000352993 A8MUU9 505 aa4.29□□□□□ -1.72
BRCA1-201ENST00000352993 NUPR2A6NF83 97 aa4.29□□□□□ -1.72
BRCA1-201ENST00000352993 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
BRCA1-201ENST00000352993 KRTAP16-1A8MUX0 517 aa4.27□□□□□ -1.73
BRCA1-201ENST00000352993 DMBT1Q9UGM3 2413 aaPredicted RBP4.27□□□□□ -1.73
BRCA1-201ENST00000352993 DNAH2Q9P225 4427 aa4.26□□□□□ -1.73
BRCA1-201ENST00000352993 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
BRCA1-201ENST00000352993 DYNC1H1Q14204 4646 aaKnown RBP4.25□□□□□ -1.73
BRCA1-201ENST00000352993 SPINT4Q6UDR6 99 aa4.24□□□□□ -1.73
BRCA1-201ENST00000352993 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
BRCA1-201ENST00000352993 H1FX-AS1Q4G0G2 97 aa4.23□□□□□ -1.73
BRCA1-201ENST00000352993 PKD1P98161 4303 aa4.23□□□□□ -1.73
BRCA1-201ENST00000352993 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
BRCA1-201ENST00000352993 PKHD1P08F94 4074 aa4.21□□□□□ -1.74
BRCA1-201ENST00000352993 C9orf92A6NGG3 77 aa4.2□□□□□ -1.74
BRCA1-201ENST00000352993 P0C880 135 aa4.18□□□□□ -1.74
BRCA1-201ENST00000352993 VPS13BQ7Z7G8 4022 aa4.18□□□□□ -1.74
BRCA1-201ENST00000352993 A0A0D9SG42 100 aa4.18□□□□□ -1.74
BRCA1-201ENST00000352993 PKHD1L1Q86WI1 4243 aa4.16□□□□□ -1.74
BRCA1-201ENST00000352993 KRTAP10-2P60368 255 aa4.15□□□□□ -1.74
BRCA1-201ENST00000352993 COX6B2Q6YFQ2 88 aa4.15□□□□□ -1.75
BRCA1-201ENST00000352993 DNAH11Q96DT5 4516 aa4.14□□□□□ -1.75
BRCA1-201ENST00000352993 NDUFAF8A1L188 74 aa4.11□□□□□ -1.75
BRCA1-201ENST00000352993 KRTAP1-4P0C5Y4 121 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms