RNA–Protein interactions for RNA: ENST00000350721.8

ATR-201, Transcript of ATR serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATR, Length 8,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-201ENST00000350721 DMDP11532 3685 aa4.58□□□□□ -1.68
ATR-201ENST00000350721 SMG1Q96Q15 3661 aaKnown RBP4.58□□□□□ -1.68
ATR-201ENST00000350721 SPATA8Q6RVD6 105 aa4.58□□□□□ -1.68
ATR-201ENST00000350721 Q5W150 140 aa4.57□□□□□ -1.68
ATR-201ENST00000350721 LINC00304Q8N9R0 145 aa4.56□□□□□ -1.68
ATR-201ENST00000350721 OTOGQ6ZRI0 2925 aa4.55□□□□□ -1.68
ATR-201ENST00000350721 A0A1B0GU33 70 aa4.55□□□□□ -1.68
ATR-201ENST00000350721 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.55□□□□□ -1.68
ATR-201ENST00000350721 ANAPC11Q9NYG5 84 aa4.54□□□□□ -1.68
ATR-201ENST00000350721 CRIPTQ9P021 101 aa4.54□□□□□ -1.68
ATR-201ENST00000350721 KRTAP1-5Q9BYS1 174 aa4.54□□□□□ -1.68
ATR-201ENST00000350721 CSMD1Q96PZ7 3565 aa4.53□□□□□ -1.68
ATR-201ENST00000350721 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
ATR-201ENST00000350721 KRTAP7-1Q8IUC3 87 aa4.52□□□□□ -1.69
ATR-201ENST00000350721 KRTAP13-1Q8IUC0 172 aa4.51□□□□□ -1.69
ATR-201ENST00000350721 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
ATR-201ENST00000350721 PRAC1Q96KF2 57 aa4.48□□□□□ -1.69
ATR-201ENST00000350721 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
ATR-201ENST00000350721 SPENQ96T58 3664 aaKnown RBP4.47□□□□□ -1.69
ATR-201ENST00000350721 Q8N1X5 172 aa4.47□□□□□ -1.69
ATR-201ENST00000350721 H3BS24 57 aa4.45□□□□□ -1.7
ATR-201ENST00000350721 SVEP1Q4LDE5 3571 aa4.45□□□□□ -1.7
ATR-201ENST00000350721 CUBNO60494 3623 aa4.43□□□□□ -1.7
ATR-201ENST00000350721 RPS29P62273 56 aaKnown RBP4.42□□□□□ -1.7
ATR-201ENST00000350721 FBN3Q75N90 2809 aa4.42□□□□□ -1.7
ATR-201ENST00000350721 A8MU10 97 aa4.41□□□□□ -1.7
ATR-201ENST00000350721 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
ATR-201ENST00000350721 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.7
ATR-201ENST00000350721 COL7A1Q02388 2944 aa4.4□□□□□ -1.7
ATR-201ENST00000350721 KRTAP11-1Q8IUC1 163 aa4.4□□□□□ -1.71
ATR-201ENST00000350721 NOTCH2NLQ7Z3S9 236 aa4.39□□□□□ -1.71
ATR-201ENST00000350721 RPL37P61927 97 aaKnown RBP4.39□□□□□ -1.71
ATR-201ENST00000350721 PANO1I0J062 215 aa4.38□□□□□ -1.71
ATR-201ENST00000350721 MEGF8Q7Z7M0 2845 aa4.38□□□□□ -1.71
ATR-201ENST00000350721 H1FX-AS1Q4G0G2 97 aa4.37□□□□□ -1.71
ATR-201ENST00000350721 ROMO1P60602 79 aa4.36□□□□□ -1.71
ATR-201ENST00000350721 C9orf92A6NGG3 77 aa4.34□□□□□ -1.71
ATR-201ENST00000350721 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
ATR-201ENST00000350721 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
ATR-201ENST00000350721 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
ATR-201ENST00000350721 A0A0D9SG42 100 aa4.3□□□□□ -1.72
ATR-201ENST00000350721 KRTAP13-3Q3SY46 172 aa4.27□□□□□ -1.73
ATR-201ENST00000350721 ADM2Q7Z4H4 148 aa4.27□□□□□ -1.73
ATR-201ENST00000350721 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
ATR-201ENST00000350721 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
ATR-201ENST00000350721 TRRAPQ9Y4A5 3859 aa4.25□□□□□ -1.73
ATR-201ENST00000350721 A8MUU9 505 aa4.25□□□□□ -1.73
ATR-201ENST00000350721 S4R3F8 94 aa4.24□□□□□ -1.73
ATR-201ENST00000350721 NBPF19A0A087WUL8 3843 aa4.24□□□□□ -1.73
ATR-201ENST00000350721 KRTAP10-1P60331 282 aa4.23□□□□□ -1.73
ATR-201ENST00000350721 C20orf166-AS1Q96NR2 134 aa4.23□□□□□ -1.73
ATR-201ENST00000350721 SMR3BP02814 79 aaPredicted RBP4.21□□□□□ -1.73
ATR-201ENST00000350721 KRTAP10-2P60368 255 aa4.21□□□□□ -1.74
ATR-201ENST00000350721 Q6ZSA8 131 aa4.21□□□□□ -1.74
ATR-201ENST00000350721 M0QZ58 72 aa4.21□□□□□ -1.74
ATR-201ENST00000350721 A0A0A0MQY5 61 aa4.19□□□□□ -1.74
ATR-201ENST00000350721 VPS13CQ709C8 3753 aa4.18□□□□□ -1.74
ATR-201ENST00000350721 CSMD2Q7Z408 3487 aa4.18□□□□□ -1.74
ATR-201ENST00000350721 KRTAP16-1A8MUX0 517 aa4.17□□□□□ -1.74
ATR-201ENST00000350721 R4GN34 69 aa4.16□□□□□ -1.74
ATR-201ENST00000350721 H0YAA0 97 aa4.15□□□□□ -1.74
ATR-201ENST00000350721 KRTAP1-4P0C5Y4 121 aa4.13□□□□□ -1.75
ATR-201ENST00000350721 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
ATR-201ENST00000350721 SEC61BP60468 96 aaKnown RBP4.07□□□□□ -1.76
ATR-201ENST00000350721 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
ATR-201ENST00000350721 AKAP9Q99996 3911 aa4.05□□□□□ -1.76
ATR-201ENST00000350721 PP632Q6XCG6 107 aa4.04□□□□□ -1.76
ATR-201ENST00000350721 ZNF469Q96JG9 3925 aaPredicted RBP3.99□□□□□ -1.77
ATR-201ENST00000350721 J3QL48 77 aa3.99□□□□□ -1.77
ATR-201ENST00000350721 Q5VSD8 79 aa3.98□□□□□ -1.77
ATR-201ENST00000350721 P0C880 135 aa3.97□□□□□ -1.77
ATR-201ENST00000350721 KRTAP21-3Q3LHN1 58 aa3.92□□□□□ -1.78
ATR-201ENST00000350721 PLAC4Q8WY50 150 aa3.9□□□□□ -1.78
ATR-201ENST00000350721 XP32Q5T750 250 aa3.9□□□□□ -1.78
ATR-201ENST00000350721 TNP1P09430 55 aa3.88□□□□□ -1.79
ATR-201ENST00000350721 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
ATR-201ENST00000350721 KRTAP3-1Q9BYR8 98 aa3.86□□□□□ -1.79
ATR-201ENST00000350721 C10orf95Q9H7T3 257 aa3.86□□□□□ -1.79
ATR-201ENST00000350721 CSMD3Q7Z407 3707 aa3.86□□□□□ -1.79
ATR-201ENST00000350721 ANK3Q12955 4377 aaKnown RBP3.83□□□□□ -1.8
ATR-201ENST00000350721 KRTAP10-6P60371 365 aaPredicted RBP3.82□□□□□ -1.8
ATR-201ENST00000350721 KRTAP10-8P60410 259 aa3.8□□□□□ -1.8
ATR-201ENST00000350721 KRTAP12-1P59990 96 aa3.79□□□□□ -1.8
ATR-201ENST00000350721 KRTAP12-2P59991 146 aa3.76□□□□□ -1.81
ATR-201ENST00000350721 M0R2T5 61 aa3.74□□□□□ -1.81
ATR-201ENST00000350721 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
ATR-201ENST00000350721 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
ATR-201ENST00000350721 KRTAP3-2Q9BYR7 98 aa3.7□□□□□ -1.82
ATR-201ENST00000350721 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
ATR-201ENST00000350721 KRTAP3-3Q9BYR6 98 aa3.67□□□□□ -1.82
ATR-201ENST00000350721 ALMS1Q8TCU4 4167 aa3.64□□□□□ -1.83
ATR-201ENST00000350721 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
ATR-201ENST00000350721 HUWE1Q7Z6Z7 4374 aaKnown RBP3.58□□□□□ -1.84
ATR-201ENST00000350721 KRTAP10-4P60372 401 aaPredicted RBP3.58□□□□□ -1.84
ATR-201ENST00000350721 ANK2Q01484 3957 aa3.55□□□□□ -1.84
ATR-201ENST00000350721 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
ATR-201ENST00000350721 LYSTQ99698 3801 aa3.49□□□□□ -1.85
ATR-201ENST00000350721 INE1O15225 51 aa3.48□□□□□ -1.85
ATR-201ENST00000350721 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
ATR-201ENST00000350721 DNAH1Q9P2D7 4330 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms