RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 DMAC1Q96GE9 116 aa6.14□□□□□ -1.43
CHRNA1-202ENST00000348749 TENM2Q9NT68 2774 aa6.14□□□□□ -1.43
CHRNA1-202ENST00000348749 MEGF8Q7Z7M0 2845 aa6.13□□□□□ -1.43
CHRNA1-202ENST00000348749 A0A1B0GU69 56 aa6.13□□□□□ -1.43
CHRNA1-202ENST00000348749 IGLV9-49A0A0B4J1Y8 123 aa6.13□□□□□ -1.43
CHRNA1-202ENST00000348749 SPACA4Q8TDM5 124 aa6.13□□□□□ -1.43
CHRNA1-202ENST00000348749 NBDYA0A0U1RRE5 68 aa6.12□□□□□ -1.43
CHRNA1-202ENST00000348749 Q5W150 140 aa6.12□□□□□ -1.43
CHRNA1-202ENST00000348749 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
CHRNA1-202ENST00000348749 H3BS24 57 aa6.11□□□□□ -1.43
CHRNA1-202ENST00000348749 Q6ZRN7 208 aaPredicted RBP6.11□□□□□ -1.43
CHRNA1-202ENST00000348749 MIR22HGQ0VDD5 57 aa6.09□□□□□ -1.43
CHRNA1-202ENST00000348749 DYNC2H1Q8NCM8 4307 aaKnown RBP6.09□□□□□ -1.43
CHRNA1-202ENST00000348749 NOTCH1P46531 2555 aa6.09□□□□□ -1.43
CHRNA1-202ENST00000348749 UQCR11O14957 56 aa6.09□□□□□ -1.43
CHRNA1-202ENST00000348749 WWC2-AS2Q96NR7 200 aa6.09□□□□□ -1.43
CHRNA1-202ENST00000348749 NUPR2A6NF83 97 aa6.07□□□□□ -1.44
CHRNA1-202ENST00000348749 PANO1I0J062 215 aa6.07□□□□□ -1.44
CHRNA1-202ENST00000348749 DNAH10Q8IVF4 4471 aa6.07□□□□□ -1.44
CHRNA1-202ENST00000348749 RETNLBQ9BQ08 111 aa6.07□□□□□ -1.44
CHRNA1-202ENST00000348749 MGAM2Q2M2H8 2515 aa6.06□□□□□ -1.44
CHRNA1-202ENST00000348749 IGLV5-52A0A0A0MRZ9 124 aa6.06□□□□□ -1.44
CHRNA1-202ENST00000348749 TGP01266 2768 aa6.05□□□□□ -1.44
CHRNA1-202ENST00000348749 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.05□□□□□ -1.44
CHRNA1-202ENST00000348749 ALMS1Q8TCU4 4167 aa6.05□□□□□ -1.44
CHRNA1-202ENST00000348749 DNAH9Q9NYC9 4486 aa6.04□□□□□ -1.44
CHRNA1-202ENST00000348749 ZNF861PO60384 105 aa6.04□□□□□ -1.44
CHRNA1-202ENST00000348749 CSAG1Q6PB30 78 aa6.03□□□□□ -1.44
CHRNA1-202ENST00000348749 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
CHRNA1-202ENST00000348749 A0A087WTM6 91 aa6.02□□□□□ -1.45
CHRNA1-202ENST00000348749 PSORS1C2Q9UIG4 136 aa6.02□□□□□ -1.45
CHRNA1-202ENST00000348749 STAB2Q8WWQ8 2551 aa6□□□□□ -1.45
CHRNA1-202ENST00000348749 FAM229AH3BQW9 127 aa6□□□□□ -1.45
CHRNA1-202ENST00000348749 IGKV2-30P06310 120 aa6□□□□□ -1.45
CHRNA1-202ENST00000348749 LYSTQ99698 3801 aa5.99□□□□□ -1.45
CHRNA1-202ENST00000348749 SSBP3-AS1Q7Z2R9 100 aa5.98□□□□□ -1.45
CHRNA1-202ENST00000348749 SPINK6Q6UWN8 80 aa5.97□□□□□ -1.45
CHRNA1-202ENST00000348749 PRKDCP78527 4128 aaKnown RBP5.94□□□□□ -1.46
CHRNA1-202ENST00000348749 IGLV7-43P04211 117 aa5.94□□□□□ -1.46
CHRNA1-202ENST00000348749 ANAPC11Q9NYG5 84 aa5.93□□□□□ -1.46
CHRNA1-202ENST00000348749 VPS13DQ5THJ4 4388 aa5.92□□□□□ -1.46
CHRNA1-202ENST00000348749 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
CHRNA1-202ENST00000348749 PLECQ15149 4684 aaKnown RBP5.9□□□□□ -1.46
CHRNA1-202ENST00000348749 CIRBP-AS1Q8TBR5 109 aa5.89□□□□□ -1.47
CHRNA1-202ENST00000348749 DNAH17Q9UFH2 4485 aa5.88□□□□□ -1.47
CHRNA1-202ENST00000348749 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
CHRNA1-202ENST00000348749 IGKV2D-30A0A075B6S6 120 aa5.87□□□□□ -1.47
CHRNA1-202ENST00000348749 C1orf134Q5TEV5 83 aa5.87□□□□□ -1.47
CHRNA1-202ENST00000348749 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
CHRNA1-202ENST00000348749 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
CHRNA1-202ENST00000348749 DNAH7Q8WXX0 4024 aa5.86□□□□□ -1.47
CHRNA1-202ENST00000348749 HECTD4Q9Y4D8 3996 aa5.86□□□□□ -1.47
CHRNA1-202ENST00000348749 A8MUU9 505 aa5.86□□□□□ -1.47
CHRNA1-202ENST00000348749 KRTAP16-1A8MUX0 517 aa5.86□□□□□ -1.47
CHRNA1-202ENST00000348749 CSMD3Q7Z407 3707 aa5.85□□□□□ -1.47
CHRNA1-202ENST00000348749 RYR3Q15413 4870 aa5.85□□□□□ -1.47
CHRNA1-202ENST00000348749 LY6G6CO95867 125 aa5.84□□□□□ -1.48
CHRNA1-202ENST00000348749 ROMO1P60602 79 aa5.83□□□□□ -1.48
CHRNA1-202ENST00000348749 H0YAA0 97 aa5.79□□□□□ -1.48
CHRNA1-202ENST00000348749 LINC00304Q8N9R0 145 aa5.79□□□□□ -1.48
CHRNA1-202ENST00000348749 Q6ZSA8 131 aa5.78□□□□□ -1.48
CHRNA1-202ENST00000348749 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
CHRNA1-202ENST00000348749 STARD9Q9P2P6 4700 aa5.76□□□□□ -1.49
CHRNA1-202ENST00000348749 DNAH2Q9P225 4427 aa5.76□□□□□ -1.49
CHRNA1-202ENST00000348749 BIRC6Q9NR09 4857 aa5.75□□□□□ -1.49
CHRNA1-202ENST00000348749 SPINK1P00995 79 aa5.75□□□□□ -1.49
CHRNA1-202ENST00000348749 FRAS1Q86XX4 4008 aa5.74□□□□□ -1.49
CHRNA1-202ENST00000348749 DNAH6Q9C0G6 4158 aa5.74□□□□□ -1.49
CHRNA1-202ENST00000348749 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
CHRNA1-202ENST00000348749 A0A1B0GU33 70 aa5.7□□□□□ -1.5
CHRNA1-202ENST00000348749 Q8N1X5 172 aa5.7□□□□□ -1.5
CHRNA1-202ENST00000348749 KRTAP1-4P0C5Y4 121 aa5.69□□□□□ -1.5
CHRNA1-202ENST00000348749 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
CHRNA1-202ENST00000348749 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
CHRNA1-202ENST00000348749 TYMSOSQ8TAI1 123 aa5.68□□□□□ -1.5
CHRNA1-202ENST00000348749 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
CHRNA1-202ENST00000348749 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
CHRNA1-202ENST00000348749 KMT2AQ03164 3969 aa5.66□□□□□ -1.5
CHRNA1-202ENST00000348749 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
CHRNA1-202ENST00000348749 P0C880 135 aa5.65□□□□□ -1.51
CHRNA1-202ENST00000348749 K7ERS5 55 aa5.63□□□□□ -1.51
CHRNA1-202ENST00000348749 KRTAP10-1P60331 282 aa5.63□□□□□ -1.51
CHRNA1-202ENST00000348749 DNAH5Q8TE73 4624 aa5.63□□□□□ -1.51
CHRNA1-202ENST00000348749 RYR2Q92736 4967 aa5.62□□□□□ -1.51
CHRNA1-202ENST00000348749 SACSQ9NZJ4 4579 aa5.57□□□□□ -1.52
CHRNA1-202ENST00000348749 CRIPTQ9P021 101 aa5.56□□□□□ -1.52
CHRNA1-202ENST00000348749 KRTAP3-1Q9BYR8 98 aa5.56□□□□□ -1.52
CHRNA1-202ENST00000348749 C20orf166-AS1Q96NR2 134 aa5.55□□□□□ -1.52
CHRNA1-202ENST00000348749 COX6B2Q6YFQ2 88 aa5.54□□□□□ -1.52
CHRNA1-202ENST00000348749 LRP1BQ9NZR2 4599 aa5.54□□□□□ -1.52
CHRNA1-202ENST00000348749 PKD1P98161 4303 aa5.52□□□□□ -1.53
CHRNA1-202ENST00000348749 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
CHRNA1-202ENST00000348749 KRTAP3-3Q9BYR6 98 aa5.49□□□□□ -1.53
CHRNA1-202ENST00000348749 KRTAP3-2Q9BYR7 98 aa5.49□□□□□ -1.53
CHRNA1-202ENST00000348749 VPS13BQ7Z7G8 4022 aa5.49□□□□□ -1.53
CHRNA1-202ENST00000348749 SPINT4Q6UDR6 99 aa5.48□□□□□ -1.53
CHRNA1-202ENST00000348749 HYDINQ4G0P3 5121 aa5.48□□□□□ -1.53
CHRNA1-202ENST00000348749 RPL37P61927 97 aaKnown RBP5.47□□□□□ -1.53
CHRNA1-202ENST00000348749 HERC2O95714 4834 aa5.47□□□□□ -1.53
CHRNA1-202ENST00000348749 FAT2Q9NYQ8 4349 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms