RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 STAB2Q8WWQ8 2551 aa9.31□□□□□ -0.92
LRP8-202ENST00000347547 Q5W150 140 aa9.3□□□□□ -0.92
LRP8-202ENST00000347547 SPATA8Q6RVD6 105 aa9.3□□□□□ -0.92
LRP8-202ENST00000347547 DMAC1Q96GE9 116 aa9.3□□□□□ -0.92
LRP8-202ENST00000347547 RTL8CO15255 209 aa9.29□□□□□ -0.92
LRP8-202ENST00000347547 LYSTQ99698 3801 aa9.29□□□□□ -0.92
LRP8-202ENST00000347547 ZNF706Q9Y5V0 76 aaPredicted RBP9.28□□□□□ -0.92
LRP8-202ENST00000347547 WWC2-AS2Q96NR7 200 aa9.28□□□□□ -0.92
LRP8-202ENST00000347547 LINC01554Q52M75 96 aa9.27□□□□□ -0.93
LRP8-202ENST00000347547 C4orf48Q5BLP8 95 aa9.27□□□□□ -0.93
LRP8-202ENST00000347547 ALMS1Q8TCU4 4167 aa9.27□□□□□ -0.93
LRP8-202ENST00000347547 PRKDCP78527 4128 aaKnown RBP9.26□□□□□ -0.93
LRP8-202ENST00000347547 ADM2Q7Z4H4 148 aa9.25□□□□□ -0.93
LRP8-202ENST00000347547 A0A1B0GU69 56 aa9.24□□□□□ -0.93
LRP8-202ENST00000347547 PANO1I0J062 215 aa9.24□□□□□ -0.93
LRP8-202ENST00000347547 MEGF8Q7Z7M0 2845 aa9.23□□□□□ -0.93
LRP8-202ENST00000347547 CSMD3Q7Z407 3707 aa9.21□□□□□ -0.93
LRP8-202ENST00000347547 DNAH7Q8WXX0 4024 aa9.21□□□□□ -0.94
LRP8-202ENST00000347547 SPACA4Q8TDM5 124 aa9.19□□□□□ -0.94
LRP8-202ENST00000347547 UQCR11O14957 56 aa9.17□□□□□ -0.94
LRP8-202ENST00000347547 MIR22HGQ0VDD5 57 aa9.17□□□□□ -0.94
LRP8-202ENST00000347547 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
LRP8-202ENST00000347547 PLECQ15149 4684 aaKnown RBP9.14□□□□□ -0.95
LRP8-202ENST00000347547 APLNQ9ULZ1 77 aa9.14□□□□□ -0.95
LRP8-202ENST00000347547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.14□□□□□ -0.95
LRP8-202ENST00000347547 FAM229AH3BQW9 127 aa9.12□□□□□ -0.95
LRP8-202ENST00000347547 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
LRP8-202ENST00000347547 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
LRP8-202ENST00000347547 IGKV2-30P06310 120 aa9.1□□□□□ -0.95
LRP8-202ENST00000347547 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
LRP8-202ENST00000347547 STARD9Q9P2P6 4700 aa9.1□□□□□ -0.95
LRP8-202ENST00000347547 ZNF861PO60384 105 aa9.09□□□□□ -0.95
LRP8-202ENST00000347547 Q6ZRN7 208 aaPredicted RBP9.09□□□□□ -0.95
LRP8-202ENST00000347547 ANAPC11Q9NYG5 84 aa9.09□□□□□ -0.95
LRP8-202ENST00000347547 PSORS1C2Q9UIG4 136 aa9.09□□□□□ -0.95
LRP8-202ENST00000347547 VPS13DQ5THJ4 4388 aa9.08□□□□□ -0.96
LRP8-202ENST00000347547 RETNLBQ9BQ08 111 aa9.07□□□□□ -0.96
LRP8-202ENST00000347547 NBDYA0A0U1RRE5 68 aa9.05□□□□□ -0.96
LRP8-202ENST00000347547 FBN3Q75N90 2809 aa9.03□□□□□ -0.96
LRP8-202ENST00000347547 CSAG1Q6PB30 78 aa9.02□□□□□ -0.96
LRP8-202ENST00000347547 H3BS24 57 aa9.01□□□□□ -0.97
LRP8-202ENST00000347547 NUPR2A6NF83 97 aa8.99□□□□□ -0.97
LRP8-202ENST00000347547 SSBP3-AS1Q7Z2R9 100 aa8.98□□□□□ -0.97
LRP8-202ENST00000347547 CIRBP-AS1Q8TBR5 109 aa8.98□□□□□ -0.97
LRP8-202ENST00000347547 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
LRP8-202ENST00000347547 DNAH8Q96JB1 4490 aa8.96□□□□□ -0.97
LRP8-202ENST00000347547 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
LRP8-202ENST00000347547 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
LRP8-202ENST00000347547 A0A087WTM6 91 aa8.92□□□□□ -0.98
LRP8-202ENST00000347547 TGP01266 2768 aa8.89□□□□□ -0.99
LRP8-202ENST00000347547 DNAH6Q9C0G6 4158 aa8.89□□□□□ -0.99
LRP8-202ENST00000347547 KMT2AQ03164 3969 aa8.87□□□□□ -0.99
LRP8-202ENST00000347547 FRAS1Q86XX4 4008 aa8.85□□□□□ -0.99
LRP8-202ENST00000347547 HECTD4Q9Y4D8 3996 aa8.85□□□□□ -0.99
LRP8-202ENST00000347547 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
LRP8-202ENST00000347547 LY6G6CO95867 125 aa8.82□□□□□ -1
LRP8-202ENST00000347547 DNAH17Q9UFH2 4485 aa8.81□□□□□ -1
LRP8-202ENST00000347547 A8MUU9 505 aa8.8□□□□□ -1
LRP8-202ENST00000347547 KRTAP25-1Q3LHN0 102 aa8.78□□□□□ -1
LRP8-202ENST00000347547 C1orf134Q5TEV5 83 aa8.76□□□□□ -1.01
LRP8-202ENST00000347547 H0YAA0 97 aa8.75□□□□□ -1.01
LRP8-202ENST00000347547 Q6ZSA8 131 aa8.75□□□□□ -1.01
LRP8-202ENST00000347547 KRTAP13-2Q52LG2 175 aa8.74□□□□□ -1.01
LRP8-202ENST00000347547 SPINK1P00995 79 aa8.71□□□□□ -1.01
LRP8-202ENST00000347547 LINC00304Q8N9R0 145 aa8.71□□□□□ -1.01
LRP8-202ENST00000347547 ROMO1P60602 79 aa8.69□□□□□ -1.02
LRP8-202ENST00000347547 HYDINQ4G0P3 5121 aa8.69□□□□□ -1.02
LRP8-202ENST00000347547 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
LRP8-202ENST00000347547 Q8N1X5 172 aa8.66□□□□□ -1.02
LRP8-202ENST00000347547 A0A1B0GU33 70 aa8.62□□□□□ -1.03
LRP8-202ENST00000347547 FAT2Q9NYQ8 4349 aa8.62□□□□□ -1.03
LRP8-202ENST00000347547 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
LRP8-202ENST00000347547 PKD1P98161 4303 aa8.61□□□□□ -1.03
LRP8-202ENST00000347547 DNAH5Q8TE73 4624 aa8.6□□□□□ -1.03
LRP8-202ENST00000347547 SACSQ9NZJ4 4579 aa8.6□□□□□ -1.03
LRP8-202ENST00000347547 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
LRP8-202ENST00000347547 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
LRP8-202ENST00000347547 KRTAP10-2P60368 255 aa8.53□□□□□ -1.04
LRP8-202ENST00000347547 K7ERS5 55 aa8.49□□□□□ -1.05
LRP8-202ENST00000347547 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
LRP8-202ENST00000347547 LRP1BQ9NZR2 4599 aa8.46□□□□□ -1.05
LRP8-202ENST00000347547 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
LRP8-202ENST00000347547 P0C880 135 aa8.42□□□□□ -1.06
LRP8-202ENST00000347547 KRTAP10-1P60331 282 aa8.42□□□□□ -1.06
LRP8-202ENST00000347547 RYR2Q92736 4967 aa8.41□□□□□ -1.06
LRP8-202ENST00000347547 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.07
LRP8-202ENST00000347547 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
LRP8-202ENST00000347547 COX6B2Q6YFQ2 88 aa8.39□□□□□ -1.07
LRP8-202ENST00000347547 CRIPTQ9P021 101 aa8.36□□□□□ -1.07
LRP8-202ENST00000347547 KMT2CQ8NEZ4 4911 aaKnown RBP8.35□□□□□ -1.07
LRP8-202ENST00000347547 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
LRP8-202ENST00000347547 DYNC1H1Q14204 4646 aaKnown RBP8.31□□□□□ -1.08
LRP8-202ENST00000347547 A0A1B0GVY2 172 aa8.28□□□□□ -1.08
LRP8-202ENST00000347547 RPL37P61927 97 aaKnown RBP8.27□□□□□ -1.09
LRP8-202ENST00000347547 FLG2Q5D862 2391 aaPredicted RBP8.24□□□□□ -1.09
LRP8-202ENST00000347547 APOBP04114 4563 aaKnown RBP8.22□□□□□ -1.09
LRP8-202ENST00000347547 C9orf92A6NGG3 77 aa8.22□□□□□ -1.09
LRP8-202ENST00000347547 TPRXLQ17RH7 258 aa8.21□□□□□ -1.09
LRP8-202ENST00000347547 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
LRP8-202ENST00000347547 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms