RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 RBM3P98179 157 aaKnown RBP8.72□□□□□ -1.01
ATG4B-201ENST00000344376 PCOTHQ58A44 107 aa8.72□□□□□ -1.01
ATG4B-201ENST00000344376 FAM236AA0A1B0GUQ0 79 aa8.7□□□□□ -1.02
ATG4B-201ENST00000344376 FAM236BA0A1B0GV22 79 aa8.7□□□□□ -1.02
ATG4B-201ENST00000344376 SS18L2Q9UHA2 77 aa8.7□□□□□ -1.02
ATG4B-201ENST00000344376 HIST1H4AP62805 103 aaKnown RBP8.69□□□□□ -1.02
ATG4B-201ENST00000344376 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
ATG4B-201ENST00000344376 RPL37P61927 97 aaKnown RBP8.66□□□□□ -1.02
ATG4B-201ENST00000344376 Q6ZQT0 140 aa8.66□□□□□ -1.02
ATG4B-201ENST00000344376 TRBV7-4A0A0J9YYF1 115 aa8.65□□□□□ -1.03
ATG4B-201ENST00000344376 UQCRQO14949 82 aa8.64□□□□□ -1.03
ATG4B-201ENST00000344376 SVIPQ8NHG7 77 aa8.63□□□□□ -1.03
ATG4B-201ENST00000344376 LINC00846Q9NV44 126 aa8.63□□□□□ -1.03
ATG4B-201ENST00000344376 ATOX1O00244 68 aa8.61□□□□□ -1.03
ATG4B-201ENST00000344376 ATP5EP2Q5VTU8 51 aa8.61□□□□□ -1.03
ATG4B-201ENST00000344376 A0A087WSZ3 146 aa8.6□□□□□ -1.03
ATG4B-201ENST00000344376 COX7CP15954 63 aa8.6□□□□□ -1.03
ATG4B-201ENST00000344376 UBL5Q9BZL1 73 aa8.59□□□□□ -1.03
ATG4B-201ENST00000344376 A0A1B0GW54 56 aa8.58□□□□□ -1.04
ATG4B-201ENST00000344376 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
ATG4B-201ENST00000344376 A0A1W2PNM2 257 aa8.54□□□□□ -1.04
ATG4B-201ENST00000344376 Q75L30 129 aa8.54□□□□□ -1.04
ATG4B-201ENST00000344376 ATP11AUNQ6ZP68 121 aa8.52□□□□□ -1.04
ATG4B-201ENST00000344376 Q96NJ1 140 aa8.52□□□□□ -1.04
ATG4B-201ENST00000344376 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.04
ATG4B-201ENST00000344376 LCE2CQ5TA81 110 aa8.51□□□□□ -1.05
ATG4B-201ENST00000344376 SERP2Q8N6R1 65 aa8.51□□□□□ -1.05
ATG4B-201ENST00000344376 KRTAP19-2Q3LHN2 52 aa8.5□□□□□ -1.05
ATG4B-201ENST00000344376 Q6ZVQ6 151 aa8.49□□□□□ -1.05
ATG4B-201ENST00000344376 SMIM20Q8N5G0 67 aa8.49□□□□□ -1.05
ATG4B-201ENST00000344376 CXCL6P80162 114 aa8.48□□□□□ -1.05
ATG4B-201ENST00000344376 A0A087WVE0 104 aa8.46□□□□□ -1.06
ATG4B-201ENST00000344376 COX6B2Q6YFQ2 88 aa8.46□□□□□ -1.06
ATG4B-201ENST00000344376 IGKV4-1P06312 121 aa8.44□□□□□ -1.06
ATG4B-201ENST00000344376 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
ATG4B-201ENST00000344376 MT1HP80294 61 aa8.44□□□□□ -1.06
ATG4B-201ENST00000344376 DSCR10P59022 87 aa8.43□□□□□ -1.06
ATG4B-201ENST00000344376 TMEM258P61165 79 aa8.43□□□□□ -1.06
ATG4B-201ENST00000344376 RPS28P62857 69 aaKnown RBP8.43□□□□□ -1.06
ATG4B-201ENST00000344376 A8MUU9 505 aa8.42□□□□□ -1.06
ATG4B-201ENST00000344376 NREPQ16612 68 aa8.4□□□□□ -1.06
ATG4B-201ENST00000344376 J3KT08 172 aa8.39□□□□□ -1.07
ATG4B-201ENST00000344376 LINC00313P59037 77 aa8.39□□□□□ -1.07
ATG4B-201ENST00000344376 LINC00472Q9H8W2 130 aa8.39□□□□□ -1.07
ATG4B-201ENST00000344376 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
ATG4B-201ENST00000344376 DEFB116Q30KQ4 102 aa8.37□□□□□ -1.07
ATG4B-201ENST00000344376 M0R2T5 61 aa8.36□□□□□ -1.07
ATG4B-201ENST00000344376 TRAV7A0A075B6U4 112 aa8.34□□□□□ -1.07
ATG4B-201ENST00000344376 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.07
ATG4B-201ENST00000344376 BPY2O14599 106 aa8.33□□□□□ -1.08
ATG4B-201ENST00000344376 KRTAP16-1A8MUX0 517 aa8.31□□□□□ -1.08
ATG4B-201ENST00000344376 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
ATG4B-201ENST00000344376 C8orf87E5RJ46 101 aa8.3□□□□□ -1.08
ATG4B-201ENST00000344376 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
ATG4B-201ENST00000344376 NOTCH2NLQ7Z3S9 236 aa8.29□□□□□ -1.08
ATG4B-201ENST00000344376 KRTAP10-6P60371 365 aaPredicted RBP8.27□□□□□ -1.09
ATG4B-201ENST00000344376 KLKP1Q107X0 134 aa8.27□□□□□ -1.09
ATG4B-201ENST00000344376 NDUFB1O75438 58 aa8.25□□□□□ -1.09
ATG4B-201ENST00000344376 LORP23490 312 aaPredicted RBP8.25□□□□□ -1.09
ATG4B-201ENST00000344376 FLGP20930 4061 aaPredicted RBP8.25□□□□□ -1.09
ATG4B-201ENST00000344376 C20orf197Q8N268 126 aa8.24□□□□□ -1.09
ATG4B-201ENST00000344376 KRTAP9-6A0A140TA67 174 aa8.23□□□□□ -1.09
ATG4B-201ENST00000344376 H7BZZ5 65 aa8.22□□□□□ -1.09
ATG4B-201ENST00000344376 FAM236DA0A1B0GTK5 79 aa8.21□□□□□ -1.1
ATG4B-201ENST00000344376 FAM236CP0DP71 79 aa8.21□□□□□ -1.1
ATG4B-201ENST00000344376 NDUFC1O43677 76 aa8.19□□□□□ -1.1
ATG4B-201ENST00000344376 A8MWP4 228 aa8.18□□□□□ -1.1
ATG4B-201ENST00000344376 Q8N9L7 120 aa8.18□□□□□ -1.1
ATG4B-201ENST00000344376 SERP1Q9Y6X1 66 aa8.17□□□□□ -1.1
ATG4B-201ENST00000344376 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
ATG4B-201ENST00000344376 K7EQZ3 153 aa8.15□□□□□ -1.1
ATG4B-201ENST00000344376 ATP5EP56381 51 aaPredicted RBP8.15□□□□□ -1.1
ATG4B-201ENST00000344376 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
ATG4B-201ENST00000344376 C8orf17Q9NRJ1 99 aa8.14□□□□□ -1.11
ATG4B-201ENST00000344376 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
ATG4B-201ENST00000344376 OCR1Q9BZK8 76 aa8.13□□□□□ -1.11
ATG4B-201ENST00000344376 HCG22E2RYF7 251 aa8.12□□□□□ -1.11
ATG4B-201ENST00000344376 HRES1P13985 223 aa8.11□□□□□ -1.11
ATG4B-201ENST00000344376 PRR15Q8IV56 129 aa8.11□□□□□ -1.11
ATG4B-201ENST00000344376 Q8N9P0 234 aaPredicted RBP8.11□□□□□ -1.11
ATG4B-201ENST00000344376 SNURFQ9Y675 71 aa8.1□□□□□ -1.11
ATG4B-201ENST00000344376 TMEM254Q8TBM7 123 aa8.1□□□□□ -1.11
ATG4B-201ENST00000344376 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
ATG4B-201ENST00000344376 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
ATG4B-201ENST00000344376 SPINK7P58062 85 aa8.05□□□□□ -1.12
ATG4B-201ENST00000344376 FSIP2Q5CZC0 6907 aa8.03□□□□□ -1.12
ATG4B-201ENST00000344376 SMIM26A0A096LP01 95 aa8.02□□□□□ -1.13
ATG4B-201ENST00000344376 MMP24-AS1A0A0U1RRL7 71 aa8.02□□□□□ -1.13
ATG4B-201ENST00000344376 C4orf26Q17RF5 130 aa8.01□□□□□ -1.13
ATG4B-201ENST00000344376 CASC2Q6XLA1 102 aa8.01□□□□□ -1.13
ATG4B-201ENST00000344376 MRPL34Q9BQ48 92 aaKnown RBP8.01□□□□□ -1.13
ATG4B-201ENST00000344376 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
ATG4B-201ENST00000344376 WFDC13Q8IUB5 93 aa7.98□□□□□ -1.13
ATG4B-201ENST00000344376 NDUFS5O43920 106 aa7.97□□□□□ -1.13
ATG4B-201ENST00000344376 KRTAP9-8Q9BYQ0 159 aa7.97□□□□□ -1.13
ATG4B-201ENST00000344376 H3BPC8 53 aa7.93□□□□□ -1.14
ATG4B-201ENST00000344376 TP53AIP1Q9HCN2 124 aa7.92□□□□□ -1.14
ATG4B-201ENST00000344376 MP68P56378 58 aa7.9□□□□□ -1.14
ATG4B-201ENST00000344376 MT2AP02795 61 aa7.88□□□□□ -1.15
ATG4B-201ENST00000344376 TRAV22A0A0B4J277 110 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms