RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 KRTAP10-2P60368 255 aa7.51□□□□□ -1.21
LMX1A-202ENST00000342310 WWC2-AS2Q96NR7 200 aa7.51□□□□□ -1.21
LMX1A-202ENST00000342310 PLECQ15149 4684 aaKnown RBP7.5□□□□□ -1.21
LMX1A-202ENST00000342310 IGLV7-43P04211 117 aa7.48□□□□□ -1.21
LMX1A-202ENST00000342310 SPINK7P58062 85 aa7.48□□□□□ -1.21
LMX1A-202ENST00000342310 DNAH7Q8WXX0 4024 aa7.48□□□□□ -1.21
LMX1A-202ENST00000342310 LOC101927531A0A1B0GV80 90 aa7.47□□□□□ -1.21
LMX1A-202ENST00000342310 SPRR1BP22528 89 aa7.47□□□□□ -1.21
LMX1A-202ENST00000342310 LCA10Q71F78 164 aa7.47□□□□□ -1.21
LMX1A-202ENST00000342310 PRAC1Q96KF2 57 aa7.45□□□□□ -1.22
LMX1A-202ENST00000342310 LINC00313P59037 77 aa7.44□□□□□ -1.22
LMX1A-202ENST00000342310 Q5W150 140 aa7.44□□□□□ -1.22
LMX1A-202ENST00000342310 TP53AIP1Q9HCN2 124 aa7.44□□□□□ -1.22
LMX1A-202ENST00000342310 LCE6AA0A183 80 aa7.43□□□□□ -1.22
LMX1A-202ENST00000342310 PLA2G1BP04054 148 aaKnown RBP7.42□□□□□ -1.22
LMX1A-202ENST00000342310 HRES1P13985 223 aa7.42□□□□□ -1.22
LMX1A-202ENST00000342310 H3BPC8 53 aa7.41□□□□□ -1.22
LMX1A-202ENST00000342310 Q96NJ1 140 aa7.41□□□□□ -1.22
LMX1A-202ENST00000342310 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.22
LMX1A-202ENST00000342310 KRTAP13-1Q8IUC0 172 aa7.4□□□□□ -1.22
LMX1A-202ENST00000342310 SPANXA2-OT1Q8N9U9 137 aa7.4□□□□□ -1.22
LMX1A-202ENST00000342310 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.22
LMX1A-202ENST00000342310 KTN1-AS1Q86SY8 53 aa7.39□□□□□ -1.23
LMX1A-202ENST00000342310 KMT2AQ03164 3969 aa7.38□□□□□ -1.23
LMX1A-202ENST00000342310 A0A1B0GU69 56 aa7.38□□□□□ -1.23
LMX1A-202ENST00000342310 PLAC8Q9NZF1 115 aa7.38□□□□□ -1.23
LMX1A-202ENST00000342310 C9orf92A6NGG3 77 aa7.37□□□□□ -1.23
LMX1A-202ENST00000342310 PRKDCP78527 4128 aaKnown RBP7.37□□□□□ -1.23
LMX1A-202ENST00000342310 ATP11AUNQ6ZP68 121 aa7.36□□□□□ -1.23
LMX1A-202ENST00000342310 FRAS1Q86XX4 4008 aa7.36□□□□□ -1.23
LMX1A-202ENST00000342310 STARD9Q9P2P6 4700 aa7.36□□□□□ -1.23
LMX1A-202ENST00000342310 KRTAP10-1P60331 282 aa7.36□□□□□ -1.23
LMX1A-202ENST00000342310 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
LMX1A-202ENST00000342310 Q8N1X5 172 aa7.35□□□□□ -1.23
LMX1A-202ENST00000342310 DNHD1Q96M86 4753 aa7.35□□□□□ -1.23
LMX1A-202ENST00000342310 C7orf65Q6ZTY9 151 aa7.34□□□□□ -1.24
LMX1A-202ENST00000342310 ACYP2P14621 99 aa7.33□□□□□ -1.24
LMX1A-202ENST00000342310 C8orf87E5RJ46 101 aa7.32□□□□□ -1.24
LMX1A-202ENST00000342310 Q6ZR54 194 aa7.32□□□□□ -1.24
LMX1A-202ENST00000342310 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
LMX1A-202ENST00000342310 Q75L30 129 aa7.32□□□□□ -1.24
LMX1A-202ENST00000342310 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
LMX1A-202ENST00000342310 LINC00483Q53H64 154 aa7.29□□□□□ -1.24
LMX1A-202ENST00000342310 SSBP3-AS1Q7Z2R9 100 aa7.28□□□□□ -1.24
LMX1A-202ENST00000342310 DNAH1Q9P2D7 4330 aa7.28□□□□□ -1.24
LMX1A-202ENST00000342310 DNAH11Q96DT5 4516 aa7.27□□□□□ -1.24
LMX1A-202ENST00000342310 FAM229AH3BQW9 127 aa7.26□□□□□ -1.25
LMX1A-202ENST00000342310 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
LMX1A-202ENST00000342310 KRTAP13-2Q52LG2 175 aa7.25□□□□□ -1.25
LMX1A-202ENST00000342310 DNAH8Q96JB1 4490 aa7.2□□□□□ -1.26
LMX1A-202ENST00000342310 MIR22HGQ0VDD5 57 aa7.19□□□□□ -1.26
LMX1A-202ENST00000342310 A6NN06 94 aa7.18□□□□□ -1.26
LMX1A-202ENST00000342310 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
LMX1A-202ENST00000342310 DNAH3Q8TD57 4116 aa7.17□□□□□ -1.26
LMX1A-202ENST00000342310 DNAH6Q9C0G6 4158 aa7.17□□□□□ -1.26
LMX1A-202ENST00000342310 LINC00304Q8N9R0 145 aa7.16□□□□□ -1.26
LMX1A-202ENST00000342310 UQCR11O14957 56 aa7.14□□□□□ -1.27
LMX1A-202ENST00000342310 VPS13DQ5THJ4 4388 aa7.14□□□□□ -1.27
LMX1A-202ENST00000342310 DNAH17Q9UFH2 4485 aa7.13□□□□□ -1.27
LMX1A-202ENST00000342310 LRP1BQ9NZR2 4599 aa7.11□□□□□ -1.27
LMX1A-202ENST00000342310 DNAH2Q9P225 4427 aa7.1□□□□□ -1.27
LMX1A-202ENST00000342310 ASB16-AS1Q495Z4 193 aa7.09□□□□□ -1.27
LMX1A-202ENST00000342310 CSAG1Q6PB30 78 aa7.09□□□□□ -1.28
LMX1A-202ENST00000342310 LINC01554Q52M75 96 aa7.06□□□□□ -1.28
LMX1A-202ENST00000342310 FAT1Q14517 4588 aa7.04□□□□□ -1.28
LMX1A-202ENST00000342310 DMAC1Q96GE9 116 aa7.04□□□□□ -1.28
LMX1A-202ENST00000342310 KRTAP1-4P0C5Y4 121 aa7.04□□□□□ -1.28
LMX1A-202ENST00000342310 HECTD4Q9Y4D8 3996 aa7.02□□□□□ -1.29
LMX1A-202ENST00000342310 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
LMX1A-202ENST00000342310 A0A0D9SG42 100 aa6.96□□□□□ -1.29
LMX1A-202ENST00000342310 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
LMX1A-202ENST00000342310 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
LMX1A-202ENST00000342310 DNAH5Q8TE73 4624 aa6.94□□□□□ -1.3
LMX1A-202ENST00000342310 MYCBP2O75592 4640 aa6.93□□□□□ -1.3
LMX1A-202ENST00000342310 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
LMX1A-202ENST00000342310 Q6ZSA8 131 aa6.92□□□□□ -1.3
LMX1A-202ENST00000342310 PKHD1P08F94 4074 aa6.92□□□□□ -1.3
LMX1A-202ENST00000342310 KRTAP16-1A8MUX0 517 aa6.91□□□□□ -1.3
LMX1A-202ENST00000342310 K7ERS5 55 aa6.88□□□□□ -1.31
LMX1A-202ENST00000342310 A0A1B0GU33 70 aa6.85□□□□□ -1.31
LMX1A-202ENST00000342310 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
LMX1A-202ENST00000342310 FAT2Q9NYQ8 4349 aa6.82□□□□□ -1.32
LMX1A-202ENST00000342310 A0A0A0MQY5 61 aa6.81□□□□□ -1.32
LMX1A-202ENST00000342310 ALMS1Q8TCU4 4167 aa6.77□□□□□ -1.33
LMX1A-202ENST00000342310 SPINT4Q6UDR6 99 aa6.75□□□□□ -1.33
LMX1A-202ENST00000342310 Q5VSD8 79 aa6.73□□□□□ -1.33
LMX1A-202ENST00000342310 LRP1Q07954 4544 aaKnown RBP6.73□□□□□ -1.33
LMX1A-202ENST00000342310 DYNC1H1Q14204 4646 aaKnown RBP6.73□□□□□ -1.33
LMX1A-202ENST00000342310 FAT3Q8TDW7 4589 aa6.72□□□□□ -1.33
LMX1A-202ENST00000342310 H0YAA0 97 aa6.71□□□□□ -1.33
LMX1A-202ENST00000342310 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
LMX1A-202ENST00000342310 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
LMX1A-202ENST00000342310 COX6B2Q6YFQ2 88 aa6.64□□□□□ -1.35
LMX1A-202ENST00000342310 KMT2CQ8NEZ4 4911 aaKnown RBP6.63□□□□□ -1.35
LMX1A-202ENST00000342310 A8MUU9 505 aa6.63□□□□□ -1.35
LMX1A-202ENST00000342310 KRTAP21-3Q3LHN1 58 aa6.63□□□□□ -1.35
LMX1A-202ENST00000342310 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
LMX1A-202ENST00000342310 APOBP04114 4563 aaKnown RBP6.6□□□□□ -1.35
LMX1A-202ENST00000342310 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
LMX1A-202ENST00000342310 C10orf95Q9H7T3 257 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms